RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 AIF1P55008 147 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 IRF9Q00978 393 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 PRKG1Q13976 671 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 UBAP2LQ14157 1087 aaKnown RBP8.01□□□□□ -1.13
CNOT4-201ENST00000315544 TMED2Q15363 201 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 PCBP1Q15365 356 aaKnown RBP eCLIP8.01□□□□□ -1.13
CNOT4-201ENST00000315544 PYCR3Q53H96 274 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 INTS6LQ5JSJ4 861 aaKnown RBP8.01□□□□□ -1.13
CNOT4-201ENST00000315544 HACD2Q6Y1H2 254 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 LARP4Q71RC2 724 aaKnown RBP eCLIP8.01□□□□□ -1.137e-7■■■■■ 35.5
CNOT4-201ENST00000315544 CPLX4Q7Z7G2 160 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 CCDC114Q96M63 670 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 DRC3Q9H069 523 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.01□□□□□ -1.138e-8■■■■■ 44.9
CNOT4-201ENST00000315544 ZNF358Q9NW07 568 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 MAP10Q9P2G4 905 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 FBXO10Q9UK96 956 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 POMPQ9Y244 141 aa8.01□□□□□ -1.13
CNOT4-201ENST00000315544 A0A0A0MRY4 1105 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 XPO1O14980 1071 aaKnown RBP8□□□□□ -1.13
CNOT4-201ENST00000315544 AP2A1O95782 977 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 KRT1P04264 644 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 RPLP2P05387 115 aaKnown RBP8□□□□□ -1.13
CNOT4-201ENST00000315544 ZNF200P98182 395 aaPredicted RBP8□□□□□ -1.13
CNOT4-201ENST00000315544 PPARDQ03181 441 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 LLGL1Q15334 1064 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 PPP1R7Q15435 360 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 RNF220Q5VTB9 566 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 SNX30Q5VWJ9 437 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 MFSD14CQ5VZR4 134 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 RHPN2Q8IUC4 686 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 LRRN4Q8WUT4 740 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 SPATA13Q96N96 652 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 ECSITQ9BQ95 431 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 PLK2Q9NYY3 685 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 TBK1Q9UHD2 729 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 SLC4A7Q9Y6M7 1214 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 CCDC22O60826 627 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 TADA2AO75478 443 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 CD160O95971 181 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 MYL2P10916 166 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 CD9P21926 228 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 MATKP42679 507 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 OVGP1Q12889 678 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 CDKN3Q16667 212 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 ZNF484Q5JVG2 852 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 METTL21CQ5VZV1 264 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 ZNF598Q86UK7 904 aaKnown RBP8□□□□□ -1.13
CNOT4-201ENST00000315544 RIMKLAQ8IXN7 391 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 TCP11Q8WWU5 503 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 C18orf25Q96B23 403 aaPredicted RBP8□□□□□ -1.13
CNOT4-201ENST00000315544 FAM111AQ96PZ2 611 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 TUBB1Q9H4B7 451 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 SYNCQ9H7C4 482 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 ZBTB26Q9HCK0 441 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 ADAM28Q9UKQ2 775 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 TRBV5-3A0A0A0MS03 114 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 BAIAP3O94812 1187 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 ATXN1LP0C7T5 689 aaKnown RBP8□□□□□ -1.13
CNOT4-201ENST00000315544 C7P10643 843 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 MYL4P12829 197 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 ACAT1P24752 427 aaKnown RBP8□□□□□ -1.13
CNOT4-201ENST00000315544 PTPN6P29350 595 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 MNAT1P51948 309 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 ORC1Q13415 861 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 TBCCQ15814 346 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 XKR7Q5GH72 579 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 LCA5Q86VQ0 697 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 PPM1NQ8N819 430 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 SPATA18Q8TC71 538 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 L3HYPDHQ96EM0 354 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 MYEOVQ96EZ4 313 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 C11orf24Q96F05 449 aaPredicted RBP8□□□□□ -1.13
CNOT4-201ENST00000315544 OR52B2Q96RD2 323 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 CYTH2Q99418 400 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 RNF39Q9H2S5 420 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 STAU2Q9NUL3 570 aaKnown RBP eCLIP8□□□□□ -1.13
CNOT4-201ENST00000315544 THAP1Q9NVV9 213 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 TCF20Q9UGU0 1960 aaKnown RBP8□□□□□ -1.13
CNOT4-201ENST00000315544 TICRRQ7Z2Z1 1910 aa8□□□□□ -1.13
CNOT4-201ENST00000315544 TMEM110-MUSTN1A8MSY1 372 aa7.99□□□□□ -1.13
CNOT4-201ENST00000315544 LYPLA1O75608 230 aaPredicted RBP7.99□□□□□ -1.13
CNOT4-201ENST00000315544 ITGB3P05106 788 aa7.99□□□□□ -1.13
CNOT4-201ENST00000315544 RBP3P10745 1247 aa7.99□□□□□ -1.13
CNOT4-201ENST00000315544 ZXDCQ2QGD7 858 aaPredicted RBP7.99□□□□□ -1.13
CNOT4-201ENST00000315544 CNPY1Q3B7I2 92 aa7.99□□□□□ -1.13
CNOT4-201ENST00000315544 GTF2IRD2BQ6EKJ0 949 aa7.99□□□□□ -1.13
CNOT4-201ENST00000315544 FSTL4Q6MZW2 842 aa7.99□□□□□ -1.13
CNOT4-201ENST00000315544 GTF2IRD2Q86UP8 949 aa7.99□□□□□ -1.13
CNOT4-201ENST00000315544 ZNF410Q86VK4 478 aa7.99□□□□□ -1.13
CNOT4-201ENST00000315544 PTRH1Q86Y79 214 aaKnown RBP7.99□□□□□ -1.13
CNOT4-201ENST00000315544 PGBD5Q8N414 524 aa7.99□□□□□ -1.13
CNOT4-201ENST00000315544 KLHL29Q96CT2 875 aa7.99□□□□□ -1.13
CNOT4-201ENST00000315544 MUC3BQ9H195 1237 aa7.99□□□□□ -1.13
CNOT4-201ENST00000315544 C2orf40Q9H1Z8 148 aa7.99□□□□□ -1.13
CNOT4-201ENST00000315544 GSTO2Q9H4Y5 243 aa7.99□□□□□ -1.13
CNOT4-201ENST00000315544 ACTL8Q9H568 366 aa7.99□□□□□ -1.13
CNOT4-201ENST00000315544 VPS45Q9NRW7 570 aa7.99□□□□□ -1.13
CNOT4-201ENST00000315544 NDFIP2Q9NV92 336 aa7.99□□□□□ -1.13
CNOT4-201ENST00000315544 PAK5Q9P286 719 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms