RNA–Protein interactions for RNA: ENST00000313860.11

LIMCH1-201, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMCH1, Length 6,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-201ENST00000313860 TAAR8Q969N4 342 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 BPIFA2Q96DR5 249 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 PPP1R16AQ96I34 528 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 SLC4A5Q9BY07 1137 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 LGR6Q9HBX8 967 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 MAGEE1Q9HCI5 957 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 IFT46Q9NQC8 304 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 LYARQ9NX58 379 aaKnown RBP7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 EFCAB5A4FU69 1503 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 ARHGEF11O15085 1522 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 KCNJ13O60928 360 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 MBP02144 154 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 SERPINF1P36955 418 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 CD97P48960 835 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 AK2P54819 239 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 ERVK-8P63133 956 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 PTGR1Q14914 329 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 RFX4Q33E94 735 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 FNBP1LQ5T0N5 605 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 KANK2Q63ZY3 851 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 ATL3Q6DD88 541 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 ADALQ6DHV7 355 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 TPTE2Q6XPS3 522 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 MMGT1Q8N4V1 131 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 CNBD1Q8NA66 436 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 SIMC1Q8NDZ2 872 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 OR4K17Q8NGC6 315 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 MITD1Q8WV92 249 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 C1orf54Q8WWF1 131 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 TBC1D10AQ9BXI6 508 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 MAGEB5Q9BZ81 275 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 DCLK3Q9C098 648 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 ADAM7Q9H2U9 754 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 FN3KQ9H479 309 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 MINDY3Q9H8M7 445 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 CYP4F12Q9HCS2 524 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 KDM5CP41229 1560 aa7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 THOC2Q8NI27 1593 aaKnown RBP7.75□□□□□ -1.17
LIMCH1-201ENST00000313860 EME2A4GXA9 379 aaPredicted RBP7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 K7ERU9 68 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 PDHBP11177 359 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 IDO1P14902 403 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 SLC1A3P43003 542 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 PHKA2P46019 1235 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 NAE1Q13564 534 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 TRIM46Q7Z4K8 759 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 MLKLQ8NB16 471 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 REPS2Q8NFH8 660 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 CREB3L1Q96BA8 519 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 CPNE2Q96FN4 548 aaPredicted RBP7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 VCPIP1Q96JH7 1222 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 NYXQ9GZU5 481 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 OR10A4Q9H209 315 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 KCNH7Q9NS40 1196 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 RALYQ9UKM9 306 aaKnown RBP7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 IL16Q14005 1332 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 FXYD6-FXYD2A0A087WZ82 144 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 TNFSF12O43508 249 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 TDP2O95551 362 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 ITGB1P05556 798 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 RAC2P15153 192 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 HNF1AP20823 631 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 TRADDQ15628 312 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 Q5PR19 223 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 SMARCD3Q6STE5 483 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 SLC4A11Q8NBS3 891 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 ADPGKQ9BRR6 497 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 STRA6Q9BX79 667 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 B3GNT4Q9C0J1 378 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 FXYD6Q9H0Q3 95 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 PCDH9Q9HC56 1237 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 PI4KBQ9UBF8 816 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 TUBGCP4Q9UGJ1 667 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 ABCC4O15439 1325 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 PARD3Q8TEW0 1356 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 MAGEB3O15480 346 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 DGAT1O75907 488 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 ATP1A1P05023 1023 aaKnown RBP7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 PNMA6AP0CW24 399 aaPredicted RBP7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 UQCRBP14927 111 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 TSHRP16473 764 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 GSTT1P30711 240 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 MANFP55145 182 aaKnown RBP7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 ZBED6P86452 979 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 DSG2Q14126 1118 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 ABCA11PQ4W5N1 156 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 MLIPQ5VWP3 458 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 WDR59Q6PJI9 974 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 AHSA2Q719I0 299 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 ZNF589Q86UQ0 364 aaPredicted RBP7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 PRCCQ92733 491 aaPredicted RBP7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 SPACA7Q96KW9 195 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 OR14A2Q96R54 314 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 MAP3K14Q99558 947 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 TASP1Q9H6P5 420 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 DDX43Q9NXZ2 648 aaKnown RBP7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 IFT52Q9Y366 437 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 RAD54BQ9Y620 910 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 WDR19Q8NEZ3 1342 aa7.74□□□□□ -1.17
LIMCH1-201ENST00000313860 GPRASP1Q5JY77 1395 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms