RNA–Protein interactions for RNA: ENST00000309859.8

GGA2-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA2, Length 5,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-201ENST00000309859 XYLBO75191 536 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 LSM12Q3MHD2 195 aaKnown RBP11.03□□□□□ -0.64
GGA2-201ENST00000309859 ZNF667Q5HYK9 610 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 C12orf50Q8NA57 414 aaPredicted RBP11.03□□□□□ -0.64
GGA2-201ENST00000309859 CDHR1Q96JP9 859 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 TTYH2Q9BSA4 534 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 NMRAL1Q9HBL8 299 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 SFMBT1Q9UHJ3 866 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 CFHP08603 1231 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 ELK4P28324 431 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 BMXP51813 675 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 PMS2P3Q13401 168 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 CCDC142Q17RM4 750 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 MGAT5BQ3V5L5 792 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 RIC1Q4ADV7 1423 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 UNC5AQ6ZN44 842 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 GALNT5Q7Z7M9 940 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 P3H2Q8IVL5 708 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 EMID1Q96A84 441 aaPredicted RBP11.03□□□□□ -0.64
GGA2-201ENST00000309859 NLRP4Q96MN2 994 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 TBCDQ9BTW9 1192 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 SPAG4Q9NPE6 437 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.03□□□□□ -0.645e-8■■□□□ 13.9
GGA2-201ENST00000309859 ZNF224Q9NZL3 707 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 NUDT5Q9UKK9 219 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 ERVK-11Q9UQG0 969 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 KLHL20Q9Y2M5 609 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 PRKAB1Q9Y478 270 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 SIGLEC16A6NMB1 481 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 HUS1O60921 280 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 PON2Q15165 354 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 TATDN1Q6P1N9 297 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 SHCBP1Q8NEM2 672 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 TFB1MQ8WVM0 346 aaKnown RBP11.03□□□□□ -0.64
GGA2-201ENST00000309859 TP63Q9H3D4 680 aaPredicted RBP11.03□□□□□ -0.64
GGA2-201ENST00000309859 RUBCNLQ9H714 662 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 EML4Q9HC35 981 aaKnown RBP11.03□□□□□ -0.64
GGA2-201ENST00000309859 OGDHLQ9ULD0 1010 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 MYH2Q9UKX2 1941 aa11.03□□□□□ -0.64
GGA2-201ENST00000309859 CLRN2A0PK11 232 aa11.02□□□□□ -0.64
GGA2-201ENST00000309859 PABPN1LA6NDY0 278 aaKnown RBP11.02□□□□□ -0.64
GGA2-201ENST00000309859 TRPC5OSA6NMA1 111 aa11.02□□□□□ -0.64
GGA2-201ENST00000309859 TP73O15350 636 aa11.02□□□□□ -0.64
GGA2-201ENST00000309859 SLITRK3O94933 977 aa11.02□□□□□ -0.64
GGA2-201ENST00000309859 TBXAS1P24557 533 aaPredicted RBP11.02□□□□□ -0.64
GGA2-201ENST00000309859 ADORA2BP29275 332 aa11.02□□□□□ -0.64
GGA2-201ENST00000309859 KCNK10P57789 538 aa11.02□□□□□ -0.64
GGA2-201ENST00000309859 FCHO2Q0JRZ9 810 aa11.02□□□□□ -0.64
GGA2-201ENST00000309859 SMUG1Q53HV7 270 aa11.02□□□□□ -0.64
GGA2-201ENST00000309859 SPANXN2Q5MJ10 180 aa11.02□□□□□ -0.64
GGA2-201ENST00000309859 UBE2Q1Q7Z7E8 422 aa11.02□□□□□ -0.64
GGA2-201ENST00000309859 ABRAQ8N0Z2 381 aa11.02□□□□□ -0.64
GGA2-201ENST00000309859 KBTBD7Q8WVZ9 684 aa11.02□□□□□ -0.64
GGA2-201ENST00000309859 ARPC5LQ9BPX5 153 aa11.02□□□□□ -0.64
GGA2-201ENST00000309859 ZNF717Q9BY31 904 aaPredicted RBP11.02□□□□□ -0.64
GGA2-201ENST00000309859 KCNK13Q9HB14 408 aa11.02□□□□□ -0.64
GGA2-201ENST00000309859 NEK6Q9HC98 313 aa11.02□□□□□ -0.64
GGA2-201ENST00000309859 TOR4AQ9NXH8 423 aa11.02□□□□□ -0.64
GGA2-201ENST00000309859 TMEM216Q9P0N5 145 aa11.02□□□□□ -0.64
GGA2-201ENST00000309859 KANSL3Q9P2N6 904 aa11.02□□□□□ -0.64
GGA2-201ENST00000309859 MTRRQ9UBK8 725 aa11.02□□□□□ -0.64
GGA2-201ENST00000309859 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.02□□□□□ -0.64
GGA2-201ENST00000309859 SDR42E2A6NKP2 422 aa11.02□□□□□ -0.65
GGA2-201ENST00000309859 TCEA3O75764 348 aa11.02□□□□□ -0.65
GGA2-201ENST00000309859 MED26O95402 600 aa11.02□□□□□ -0.65
GGA2-201ENST00000309859 TTKP33981 857 aa11.02□□□□□ -0.65
GGA2-201ENST00000309859 PTPN7P35236 360 aa11.02□□□□□ -0.65
GGA2-201ENST00000309859 PCSK7Q16549 785 aa11.02□□□□□ -0.65
GGA2-201ENST00000309859 C15orf59Q2T9L4 293 aaPredicted RBP11.02□□□□□ -0.65
GGA2-201ENST00000309859 ZCCHC8Q6NZY4 707 aaKnown RBP11.02□□□□□ -0.65
GGA2-201ENST00000309859 TDRPQ86YL5 185 aa11.02□□□□□ -0.65
GGA2-201ENST00000309859 CERS2Q96G23 380 aa11.02□□□□□ -0.65
GGA2-201ENST00000309859 TBX20Q9UMR3 447 aa11.02□□□□□ -0.65
GGA2-201ENST00000309859 PRPF19Q9UMS4 504 aaKnown RBP11.02□□□□□ -0.65
GGA2-201ENST00000309859 MYH3P11055 1940 aa11.02□□□□□ -0.65
GGA2-201ENST00000309859 ARHGAP23Q9P227 1491 aa11.02□□□□□ -0.65
GGA2-201ENST00000309859 TMCC2O75069 709 aa11.02□□□□□ -0.65
GGA2-201ENST00000309859 IL1R1P14778 569 aa11.02□□□□□ -0.65
GGA2-201ENST00000309859 C4orf22Q6V702 233 aa11.02□□□□□ -0.65
GGA2-201ENST00000309859 RP9Q8TA86 221 aaKnown RBP11.02□□□□□ -0.65
GGA2-201ENST00000309859 CANT1Q8WVQ1 401 aa11.02□□□□□ -0.65
GGA2-201ENST00000309859 ZNF606Q8WXB4 792 aa11.02□□□□□ -0.65
GGA2-201ENST00000309859 OLFM1Q99784 485 aa11.02□□□□□ -0.65
GGA2-201ENST00000309859 WBP11Q9Y2W2 641 aaKnown RBP11.02□□□□□ -0.65
GGA2-201ENST00000309859 RECQL5O94762 991 aaPredicted RBP11.02□□□□□ -0.65
GGA2-201ENST00000309859 IL7RP16871 459 aa11.02□□□□□ -0.65
GGA2-201ENST00000309859 HDCP19113 662 aa11.02□□□□□ -0.65
GGA2-201ENST00000309859 FMO4P31512 558 aa11.02□□□□□ -0.65
GGA2-201ENST00000309859 GABRB2P47870 512 aa11.02□□□□□ -0.65
GGA2-201ENST00000309859 KRT6CP48668 564 aa11.02□□□□□ -0.65
GGA2-201ENST00000309859 CD83Q01151 205 aa11.02□□□□□ -0.65
GGA2-201ENST00000309859 CLCQ05315 142 aa11.02□□□□□ -0.65
GGA2-201ENST00000309859 CHRNB3Q05901 458 aa11.02□□□□□ -0.65
GGA2-201ENST00000309859 PWP1Q13610 501 aa11.02□□□□□ -0.65
GGA2-201ENST00000309859 MOGQ16653 247 aa11.02□□□□□ -0.65
GGA2-201ENST00000309859 SPESP1Q6UW49 350 aa11.02□□□□□ -0.65
GGA2-201ENST00000309859 CHSY1Q86X52 802 aa11.02□□□□□ -0.65
GGA2-201ENST00000309859 TBC1D21Q8IYX1 336 aa11.02□□□□□ -0.65
GGA2-201ENST00000309859 LMTK2Q8IWU2 1503 aa11.02□□□□□ -0.65
GGA2-201ENST00000309859 GUCY1B2O75343 617 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms