RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 FNDC3BQ53EP0 1204 aaKnown RBP18.31■□□□□ 0.52
SSSCA1-201ENST00000309328 C2orf27AQ580R0 203 aa18.31■□□□□ 0.52
SSSCA1-201ENST00000309328 MEI1Q5TIA1 1274 aa18.31■□□□□ 0.52
SSSCA1-201ENST00000309328 EGFLAMQ63HQ2 1017 aa18.31■□□□□ 0.52
SSSCA1-201ENST00000309328 SLC9A4Q6AI14 798 aa18.31■□□□□ 0.52
SSSCA1-201ENST00000309328 SPOCD1Q6ZMY3 1216 aa18.31■□□□□ 0.52
SSSCA1-201ENST00000309328 APCDD1Q8J025 514 aa18.31■□□□□ 0.52
SSSCA1-201ENST00000309328 PCDH19Q8TAB3 1148 aa18.31■□□□□ 0.52
SSSCA1-201ENST00000309328 KRT35Q92764 455 aa18.31■□□□□ 0.52
SSSCA1-201ENST00000309328 CCDC114Q96M63 670 aa18.31■□□□□ 0.52
SSSCA1-201ENST00000309328 SPON2Q9BUD6 331 aa18.31■□□□□ 0.52
SSSCA1-201ENST00000309328 BRD8Q9H0E9 1235 aa18.31■□□□□ 0.52
SSSCA1-201ENST00000309328 C11orf16Q9NQ32 467 aa18.31■□□□□ 0.52
SSSCA1-201ENST00000309328 NDFIP2Q9NV92 336 aa18.31■□□□□ 0.52
SSSCA1-201ENST00000309328 HAUS2Q9NVX0 235 aa18.31■□□□□ 0.52
SSSCA1-201ENST00000309328 VPS51Q9UID3 782 aa18.31■□□□□ 0.52
SSSCA1-201ENST00000309328 CBX4O00257 560 aa18.3■□□□□ 0.52
SSSCA1-201ENST00000309328 SYNCRIPO60506 623 aaKnown RBP18.3■□□□□ 0.52
SSSCA1-201ENST00000309328 KLF8O95600 359 aaPredicted RBP18.3■□□□□ 0.52
SSSCA1-201ENST00000309328 CHRM1P11229 460 aaPredicted RBP18.3■□□□□ 0.52
SSSCA1-201ENST00000309328 TGM2P21980 687 aa18.3■□□□□ 0.52
SSSCA1-201ENST00000309328 ZNF33AQ06730 810 aa18.3■□□□□ 0.52
SSSCA1-201ENST00000309328 MMRN1Q13201 1228 aa18.3■□□□□ 0.52
SSSCA1-201ENST00000309328 RFTN1Q14699 578 aaPredicted RBP18.3■□□□□ 0.52
SSSCA1-201ENST00000309328 PTPRNQ16849 979 aa18.3■□□□□ 0.52
SSSCA1-201ENST00000309328 INO80DQ53TQ3 878 aaPredicted RBP18.3■□□□□ 0.52
SSSCA1-201ENST00000309328 MFSD7Q6UXD7 560 aa18.3■□□□□ 0.52
SSSCA1-201ENST00000309328 ZNF354CQ86Y25 554 aa18.3■□□□□ 0.52
SSSCA1-201ENST00000309328 RFX6Q8HWS3 928 aa18.3■□□□□ 0.52
SSSCA1-201ENST00000309328 CAMKK1Q8N5S9 505 aa18.3■□□□□ 0.52
SSSCA1-201ENST00000309328 ALLCQ8N6M5 410 aa18.3■□□□□ 0.52
SSSCA1-201ENST00000309328 TXNDC5Q8NBS9 432 aaKnown RBP18.3■□□□□ 0.52
SSSCA1-201ENST00000309328 OR7D4Q8NG98 312 aa18.3■□□□□ 0.52
SSSCA1-201ENST00000309328 OR52K2Q8NGK3 314 aa18.3■□□□□ 0.52
SSSCA1-201ENST00000309328 RNF25Q96BH1 459 aaPredicted RBP18.3■□□□□ 0.52
SSSCA1-201ENST00000309328 ZNF599Q96NL3 588 aa18.3■□□□□ 0.52
SSSCA1-201ENST00000309328 PSMB7Q99436 277 aa18.3■□□□□ 0.52
SSSCA1-201ENST00000309328 CEP44Q9C0F1 390 aa18.3■□□□□ 0.52
SSSCA1-201ENST00000309328 CARD9Q9H257 536 aa18.3■□□□□ 0.52
SSSCA1-201ENST00000309328 TMEM245Q9H330 911 aa18.3■□□□□ 0.52
SSSCA1-201ENST00000309328 NOL6Q9H6R4 1146 aaKnown RBP18.3■□□□□ 0.52
SSSCA1-201ENST00000309328 POLMQ9NP87 494 aaPredicted RBP18.3■□□□□ 0.52
SSSCA1-201ENST00000309328 MYOFQ9NZM1 2061 aa18.29■□□□□ 0.52
SSSCA1-201ENST00000309328 TARSL2A2RTX5 802 aaKnown RBP18.29■□□□□ 0.52
SSSCA1-201ENST00000309328 PI15O43692 258 aa18.29■□□□□ 0.52
SSSCA1-201ENST00000309328 ATP9BO43861 1147 aa18.29■□□□□ 0.52
SSSCA1-201ENST00000309328 ALDH1A2O94788 518 aa18.29■□□□□ 0.52
SSSCA1-201ENST00000309328 TJP3O95049 919 aa18.29■□□□□ 0.52
SSSCA1-201ENST00000309328 HOXB2P14652 356 aa18.29■□□□□ 0.52
SSSCA1-201ENST00000309328 HOXA6P31267 233 aa18.29■□□□□ 0.52
SSSCA1-201ENST00000309328 CXCL12P48061 93 aa18.29■□□□□ 0.52
SSSCA1-201ENST00000309328 MTAPQ13126 283 aa18.29■□□□□ 0.52
SSSCA1-201ENST00000309328 HNRNPA1L2Q32P51 320 aaKnown RBP18.29■□□□□ 0.52
SSSCA1-201ENST00000309328 NCBP2-AS2Q69YL0 99 aa18.29■□□□□ 0.52
SSSCA1-201ENST00000309328 TIGD7Q6NT04 549 aaPredicted RBP18.29■□□□□ 0.52
SSSCA1-201ENST00000309328 Q6ZS52 159 aa18.29■□□□□ 0.52
SSSCA1-201ENST00000309328 SFTPA1Q8IWL2 248 aa18.29■□□□□ 0.52
SSSCA1-201ENST00000309328 ATPAF2Q8N5M1 289 aa18.29■□□□□ 0.52
SSSCA1-201ENST00000309328 PQLC3Q8N755 202 aa18.29■□□□□ 0.52
SSSCA1-201ENST00000309328 TMEM105Q8N8V8 129 aa18.29■□□□□ 0.52
SSSCA1-201ENST00000309328 DTWD2Q8NBA8 298 aa18.29■□□□□ 0.52
SSSCA1-201ENST00000309328 CYB5D2Q8WUJ1 264 aa18.29■□□□□ 0.52
SSSCA1-201ENST00000309328 NSMCE1Q8WV22 266 aa18.29■□□□□ 0.52
SSSCA1-201ENST00000309328 FATE1Q969F0 183 aa18.29■□□□□ 0.52
SSSCA1-201ENST00000309328 ISG20Q96AZ6 181 aaKnown RBP18.29■□□□□ 0.52
SSSCA1-201ENST00000309328 HMCESQ96FZ2 354 aa18.29■□□□□ 0.52
SSSCA1-201ENST00000309328 KLC2Q9H0B6 622 aa18.29■□□□□ 0.52
SSSCA1-201ENST00000309328 SPATA6Q9NWH7 488 aaPredicted RBP18.29■□□□□ 0.52
SSSCA1-201ENST00000309328 TRMT1Q9NXH9 659 aaKnown RBP18.29■□□□□ 0.52
SSSCA1-201ENST00000309328 PYCARDQ9ULZ3 195 aa18.29■□□□□ 0.52
SSSCA1-201ENST00000309328 STON1Q9Y6Q2 735 aa18.29■□□□□ 0.52
SSSCA1-201ENST00000309328 hCG_1818297A0A087WSY0 165 aa18.28■□□□□ 0.52
SSSCA1-201ENST00000309328 EDDM13A0A1B0GTR0 161 aa18.28■□□□□ 0.52
SSSCA1-201ENST00000309328 FAM86C2PA6NEL3 165 aa18.28■□□□□ 0.52
SSSCA1-201ENST00000309328 DFFAO00273 331 aa18.28■□□□□ 0.52
SSSCA1-201ENST00000309328 DDX3YO15523 660 aaKnown RBP18.28■□□□□ 0.52
SSSCA1-201ENST00000309328 LAMTOR5O43504 91 aa18.28■□□□□ 0.52
SSSCA1-201ENST00000309328 ZMPSTE24O75844 475 aa18.28■□□□□ 0.52
SSSCA1-201ENST00000309328 ACVRL1P37023 503 aa18.28■□□□□ 0.52
SSSCA1-201ENST00000309328 MARCKSL1P49006 195 aa18.28■□□□□ 0.52
SSSCA1-201ENST00000309328 SERPINH1P50454 418 aaKnown RBP18.28■□□□□ 0.52
SSSCA1-201ENST00000309328 PAPOLAP51003 745 aaKnown RBP18.28■□□□□ 0.52
SSSCA1-201ENST00000309328 GALNT2Q10471 571 aa18.28■□□□□ 0.52
SSSCA1-201ENST00000309328 PDK1Q15118 436 aa18.28■□□□□ 0.52
SSSCA1-201ENST00000309328 CRY1Q16526 586 aa18.28■□□□□ 0.52
SSSCA1-201ENST00000309328 SEL1L2Q5TEA6 688 aa18.28■□□□□ 0.52
SSSCA1-201ENST00000309328 EMC10Q5UCC4 262 aa18.28■□□□□ 0.52
SSSCA1-201ENST00000309328 C1orf210Q8IVY1 113 aa18.28■□□□□ 0.52
SSSCA1-201ENST00000309328 ARHGAP12Q8IWW6 846 aa18.28■□□□□ 0.52
SSSCA1-201ENST00000309328 SH2D3CQ8N5H7 860 aa18.28■□□□□ 0.52
SSSCA1-201ENST00000309328 NPWQ8N729 165 aa18.28■□□□□ 0.52
SSSCA1-201ENST00000309328 ATP11CQ8NB49 1132 aa18.28■□□□□ 0.52
SSSCA1-201ENST00000309328 ALG3Q92685 438 aa18.28■□□□□ 0.52
SSSCA1-201ENST00000309328 MRGPRX3Q96LB0 322 aa18.28■□□□□ 0.52
SSSCA1-201ENST00000309328 FAM126AQ9BYI3 521 aaPredicted RBP18.28■□□□□ 0.52
SSSCA1-201ENST00000309328 OSBPL8Q9BZF1 889 aa18.28■□□□□ 0.52
SSSCA1-201ENST00000309328 SLC39A8Q9C0K1 460 aa18.28■□□□□ 0.52
SSSCA1-201ENST00000309328 SP110Q9HB58 689 aa18.28■□□□□ 0.52
SSSCA1-201ENST00000309328 CACNA2D2Q9NY47 1150 aa18.28■□□□□ 0.52
SSSCA1-201ENST00000309328 FBXO4Q9UKT5 387 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms