RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 PCDH19Q8TAB3 1148 aa13.51□□□□□ -0.25
DDX54-201ENST00000306014 MID1IP1Q9NPA3 183 aa13.51□□□□□ -0.25
DDX54-201ENST00000306014 ADAM28Q9UKQ2 775 aa13.51□□□□□ -0.25
DDX54-201ENST00000306014 CASTOR2A6NHX0 329 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 GRIA3P42263 894 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 ZRANB3Q5FWF4 1079 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 TIGD7Q6NT04 549 aaPredicted RBP13.5□□□□□ -0.25
DDX54-201ENST00000306014 NEPROQ6NW34 567 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 TSHZ1Q6ZSZ6 1077 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 SLC22A9Q8IVM8 553 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 DNAJB3Q8WWF6 145 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 LENG8Q96PV6 779 aaPredicted RBP13.5□□□□□ -0.25
DDX54-201ENST00000306014 TMEM216Q9P0N5 145 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 PSMD13Q9UNM6 376 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 SLC30A1Q9Y6M5 507 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 H0Y626 953 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 TRIM16O95361 564 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 IVDP26440 423 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 NUP107P57740 925 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 DCTN2Q13561 401 aaKnown RBP13.5□□□□□ -0.25
DDX54-201ENST00000306014 CERCAMQ5T4B2 595 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 GTF3C2Q8WUA4 911 aaPredicted RBP13.5□□□□□ -0.25
DDX54-201ENST00000306014 HSFY1Q96LI6 401 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 NPAS2Q99743 824 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 NUDT5Q9UKK9 219 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 NDUFAF1Q9Y375 327 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 MAFBQ9Y5Q3 323 aaPredicted RBP13.5□□□□□ -0.25
DDX54-201ENST00000306014 C2CD4BA6NLJ0 364 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 GPR25O00155 361 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 TYROBPO43914 113 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 TPSB2P20231 275 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 CYP2B6P20813 491 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 SERPINB10P48595 397 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 TMED10P49755 219 aaKnown RBP13.5□□□□□ -0.25
DDX54-201ENST00000306014 ACTR3P61158 418 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 CHRNB3Q05901 458 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 TWF1Q12792 350 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 TPSAB1Q15661 275 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 CYP51A1Q16850 503 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 CCDC81Q6ZN84 652 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 NDRG1Q92597 394 aaKnown RBP13.5□□□□□ -0.25
DDX54-201ENST00000306014 TBL1YQ9BQ87 522 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 APOL5Q9BWW9 433 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 SLC17A6Q9P2U8 582 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 CRYL1Q9Y2S2 319 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 PKP3Q9Y446 797 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 LRRC42Q9Y546 428 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 TMEM114B3SHH9 223 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 METTL18O95568 372 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 TRIM16LQ309B1 348 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 PPP1R15BQ5SWA1 713 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 LIPMQ5VYY2 423 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 DCUN1D1Q96GG9 259 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 CASS4Q9NQ75 786 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 AK5Q9Y6K8 562 aa13.5□□□□□ -0.25
DDX54-201ENST00000306014 LTFP02788 710 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 HOXD10P28358 340 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 ADCYAP1R1P41586 468 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 GRIA1P42261 906 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 MATKP42679 507 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 AQP4P55087 323 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 CA9Q16790 459 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 C10orf120Q5SQS8 335 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 ILDR2Q71H61 639 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 RIOX2Q8IUF8 465 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 ASIC4Q96FT7 647 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 VAT1Q99536 393 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 NIFKQ9BYG3 293 aaKnown RBP13.49□□□□□ -0.25
DDX54-201ENST00000306014 PRKAG3Q9UGI9 489 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 HMGXB4Q9UGU5 601 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 DOT1LQ8TEK3 1739 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 SLC15A5A6NIM6 579 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 CLDN5O00501 218 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 MFSD11O43934 449 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 DEAF1O75398 565 aaPredicted RBP13.49□□□□□ -0.25
DDX54-201ENST00000306014 THP07101 528 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 ATP6V1B2P21281 511 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 NEK3P51956 506 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 NR1H2P55055 460 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 FSTL1Q12841 308 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 MOGSQ13724 837 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 LRRC8BQ6P9F7 803 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 EFL1Q7Z2Z2 1120 aaKnown RBP13.49□□□□□ -0.25
DDX54-201ENST00000306014 UNC5BQ8IZJ1 945 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 PYROXD2Q8N2H3 581 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 NIPA2Q8N8Q9 360 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 CRYGNQ8WXF5 182 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 DGCR14Q96DF8 476 aaKnown RBP13.49□□□□□ -0.25
DDX54-201ENST00000306014 RTKNQ9BST9 563 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 BRD8Q9H0E9 1235 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 ZFYVE28Q9HCC9 887 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 PRPF19Q9UMS4 504 aaKnown RBP13.49□□□□□ -0.25
DDX54-201ENST00000306014 PTPRJQ12913 1337 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 FKBP9O95302 570 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 GLP2RO95838 553 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 CCDC166P0CW27 439 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 ODC1P11926 461 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 ASPAP45381 313 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 LHX1P48742 406 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 ATXN1P54253 815 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms