RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 SPARCL1Q14515 664 aa10.81□□□□□ -0.68
CLP1-201ENST00000302731 CRYMQ14894 314 aa10.81□□□□□ -0.68
CLP1-201ENST00000302731 ALFQ53S48 1182 aa10.81□□□□□ -0.68
CLP1-201ENST00000302731 RAP1GAP2Q684P5 730 aa10.81□□□□□ -0.68
CLP1-201ENST00000302731 FAM117BQ6P1L5 589 aa10.81□□□□□ -0.68
CLP1-201ENST00000302731 CASC4Q6P4E1 433 aa10.81□□□□□ -0.68
CLP1-201ENST00000302731 RGS9BPQ6ZS82 235 aa10.81□□□□□ -0.68
CLP1-201ENST00000302731 SH2D5Q6ZV89 423 aa10.81□□□□□ -0.68
CLP1-201ENST00000302731 MARK2Q7KZI7 788 aaKnown RBP10.81□□□□□ -0.68
CLP1-201ENST00000302731 CHSY1Q86X52 802 aa10.81□□□□□ -0.68
CLP1-201ENST00000302731 CTAGE3PQ8IX95 158 aa10.81□□□□□ -0.68
CLP1-201ENST00000302731 ANKRD42Q8N9B4 389 aa10.81□□□□□ -0.68
CLP1-201ENST00000302731 BANPQ8N9N5 519 aa10.81□□□□□ -0.68
CLP1-201ENST00000302731 DNAAF3Q8N9W5 541 aa10.81□□□□□ -0.68
CLP1-201ENST00000302731 OR52K1Q8NGK4 314 aa10.81□□□□□ -0.68
CLP1-201ENST00000302731 IGSF8Q969P0 613 aa10.81□□□□□ -0.68
CLP1-201ENST00000302731 MRRFQ96E11 262 aaKnown RBP10.81□□□□□ -0.68
CLP1-201ENST00000302731 OXNAD1Q96HP4 312 aaPredicted RBP10.81□□□□□ -0.68
CLP1-201ENST00000302731 NSRP1Q9H0G5 558 aaKnown RBP10.81□□□□□ -0.68
CLP1-201ENST00000302731 RBM22Q9NW64 420 aaKnown RBP eCLIP10.81□□□□□ -0.68
CLP1-201ENST00000302731 SYBUQ9NX95 663 aa10.81□□□□□ -0.68
CLP1-201ENST00000302731 FAM237BA0A1B0GVD1 139 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 CXorf49A8MYA2 514 aaPredicted RBP10.8□□□□□ -0.68
CLP1-201ENST00000302731 F5H423 210 aaPredicted RBP10.8□□□□□ -0.68
CLP1-201ENST00000302731 COCHO43405 550 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 RAMP2O60895 175 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 GJB5O95377 273 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 LATS1O95835 1130 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 OAS1P00973 400 aaKnown RBP10.8□□□□□ -0.68
CLP1-201ENST00000302731 CTSAP10619 480 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 CA4P22748 312 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 EPHB3P54753 998 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 IL10RBQ08334 325 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 MGAT5Q09328 741 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 MPP3Q13368 585 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 TAF12Q16514 161 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 GKAP1Q5VSY0 366 aaPredicted RBP10.8□□□□□ -0.68
CLP1-201ENST00000302731 NADSYN1Q6IA69 706 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 TRMT10BQ6PF06 316 aaKnown RBP10.8□□□□□ -0.68
CLP1-201ENST00000302731 TIFABQ6ZNK6 161 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 MICALCLQ6ZW33 695 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 CPLX4Q7Z7G2 160 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 ITIH5Q86UX2 942 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 C4orf33Q8N1A6 199 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 TEX26Q8N6G2 289 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 SHROOM3Q8TF72 1996 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 NSMCE1Q8WV22 266 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 PTCD2Q8WV60 388 aaKnown RBP10.8□□□□□ -0.68
CLP1-201ENST00000302731 CLP1Q92989 425 aaKnown RBP10.8□□□□□ -0.68
CLP1-201ENST00000302731 PSMG2Q969U7 264 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 RPRD1AQ96P16 312 aaPredicted RBP10.8□□□□□ -0.68
CLP1-201ENST00000302731 ATXN2Q99700 1313 aaKnown RBP10.8□□□□□ -0.68
CLP1-201ENST00000302731 NACA2Q9H009 215 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 ZBP1Q9H171 429 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 SLC25A51Q9H1U9 297 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 ENTPD7Q9NQZ7 604 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 SMYD2Q9NRG4 433 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 VPS45Q9NRW7 570 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 MKS1Q9NXB0 559 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 ASB3Q9Y575 518 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 INSL5Q9Y5Q6 135 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 RPS6KL1Q9Y6S9 549 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 FAM169AQ9Y6X4 670 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 NYNRINQ9P2P1 1898 aaKnown RBP10.8□□□□□ -0.68
CLP1-201ENST00000302731 PRRG1O14668 218 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 SPAG7O75391 227 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 NEBLO76041 1014 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 CNTN5O94779 1100 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 HLA-DQB2P05538 268 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 HMBSP08397 361 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 LINC00271P0C7V0 271 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 ACRP10323 421 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 CCNFP41002 786 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 KCNQ1P51787 676 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 CDH4P55283 916 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 WDR4P57081 412 aaKnown RBP10.8□□□□□ -0.68
CLP1-201ENST00000302731 TWF1Q12792 350 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 LRRC14Q15048 493 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 POLD3Q15054 466 aaPredicted RBP10.8□□□□□ -0.68
CLP1-201ENST00000302731 PABPC1LQ4VXU2 614 aaKnown RBP10.8□□□□□ -0.68
CLP1-201ENST00000302731 FAM133BQ5BKY9 247 aaKnown RBP10.8□□□□□ -0.68
CLP1-201ENST00000302731 RABGAP1LQ5R372 815 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 MARC1Q5VT66 337 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 FOXR1Q6PIV2 292 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 OTOP3Q7RTS5 596 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 TFAP2DQ7Z6R9 452 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 TMCO2Q7Z6W1 182 aaPredicted RBP10.8□□□□□ -0.68
CLP1-201ENST00000302731 DNAJB7Q7Z6W7 309 aaPredicted RBP10.8□□□□□ -0.68
CLP1-201ENST00000302731 FIBCD1Q8N539 461 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 MGARPQ8TDB4 240 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 HMCESQ96FZ2 354 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 CERS2Q96G23 380 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 ZNF419Q96HQ0 510 aaPredicted RBP10.8□□□□□ -0.68
CLP1-201ENST00000302731 APOPT1Q96IL0 206 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 ZNF599Q96NL3 588 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 DDX50Q9BQ39 737 aaKnown RBP10.8□□□□□ -0.68
CLP1-201ENST00000302731 TBL1YQ9BQ87 522 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 KIF9Q9HAQ2 790 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 SP110Q9HB58 689 aa10.8□□□□□ -0.68
CLP1-201ENST00000302731 HAUS2Q9NVX0 235 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms