RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 ZNF829Q3KNS6 432 aaPredicted RBP11.09□□□□□ -0.63
ZNF558-201ENST00000301475 FGD3Q5JSP0 725 aa11.09□□□□□ -0.63
ZNF558-201ENST00000301475 RWDD4Q6NW29 188 aaKnown RBP11.09□□□□□ -0.63
ZNF558-201ENST00000301475 KCNT2Q6UVM3 1135 aa11.09□□□□□ -0.63
ZNF558-201ENST00000301475 FAM183BPQ6ZVS7 135 aa11.09□□□□□ -0.63
ZNF558-201ENST00000301475 HERC6Q8IVU3 1022 aa11.09□□□□□ -0.63
ZNF558-201ENST00000301475 PCDH20Q8N6Y1 951 aaKnown RBP11.09□□□□□ -0.63
ZNF558-201ENST00000301475 UBA3Q8TBC4 463 aa11.09□□□□□ -0.63
ZNF558-201ENST00000301475 HNRNPABQ99729 332 aaKnown RBP11.09□□□□□ -0.63
ZNF558-201ENST00000301475 ILKAPQ9H0C8 392 aaPredicted RBP11.09□□□□□ -0.63
ZNF558-201ENST00000301475 HIPK3Q9H422 1215 aa11.09□□□□□ -0.63
ZNF558-201ENST00000301475 EFCAB1Q9HAE3 211 aa11.09□□□□□ -0.63
ZNF558-201ENST00000301475 FZD1Q9UP38 647 aa11.09□□□□□ -0.63
ZNF558-201ENST00000301475 SLC8A2Q9UPR5 921 aa11.09□□□□□ -0.63
ZNF558-201ENST00000301475 COPG1Q9Y678 874 aaKnown RBP11.09□□□□□ -0.63
ZNF558-201ENST00000301475 TK2O00142 265 aa11.08□□□□□ -0.64
ZNF558-201ENST00000301475 PSAPP07602 524 aa11.08□□□□□ -0.64
ZNF558-201ENST00000301475 PGAM1P18669 254 aa11.08□□□□□ -0.64
ZNF558-201ENST00000301475 UGT1A6P19224 532 aa11.08□□□□□ -0.64
ZNF558-201ENST00000301475 UGT1A1P22309 533 aa11.08□□□□□ -0.64
ZNF558-201ENST00000301475 UGT1A4P22310 534 aa11.08□□□□□ -0.64
ZNF558-201ENST00000301475 CYP2F1P24903 491 aa11.08□□□□□ -0.64
ZNF558-201ENST00000301475 UGT1A3P35503 534 aa11.08□□□□□ -0.64
ZNF558-201ENST00000301475 UGT1A5P35504 534 aa11.08□□□□□ -0.64
ZNF558-201ENST00000301475 PTPN11Q06124 597 aaPredicted RBP11.08□□□□□ -0.64
ZNF558-201ENST00000301475 HERC3Q15034 1050 aa11.08□□□□□ -0.64
ZNF558-201ENST00000301475 CCDC14Q49A88 953 aa11.08□□□□□ -0.64
ZNF558-201ENST00000301475 AARS2Q5JTZ9 985 aaKnown RBP11.08□□□□□ -0.64
ZNF558-201ENST00000301475 NXNQ6DKJ4 435 aa11.08□□□□□ -0.64
ZNF558-201ENST00000301475 STYK1Q6J9G0 422 aa11.08□□□□□ -0.64
ZNF558-201ENST00000301475 GK5Q6ZS86 529 aa11.08□□□□□ -0.64
ZNF558-201ENST00000301475 DPH6Q7L8W6 267 aa11.08□□□□□ -0.64
ZNF558-201ENST00000301475 SETD3Q86TU7 594 aaPredicted RBP11.08□□□□□ -0.64
ZNF558-201ENST00000301475 ACVR1CQ8NER5 493 aa11.08□□□□□ -0.64
ZNF558-201ENST00000301475 ISL2Q96A47 359 aa11.08□□□□□ -0.64
ZNF558-201ENST00000301475 ELOVL4Q9GZR5 314 aa11.08□□□□□ -0.64
ZNF558-201ENST00000301475 NAA50Q9GZZ1 169 aaKnown RBP11.08□□□□□ -0.64
ZNF558-201ENST00000301475 BRD8Q9H0E9 1235 aa11.08□□□□□ -0.64
ZNF558-201ENST00000301475 NOL11Q9H8H0 719 aaKnown RBP11.08□□□□□ -0.64
ZNF558-201ENST00000301475 TRNAU1APQ9NX07 287 aaKnown RBP11.08□□□□□ -0.64
ZNF558-201ENST00000301475 KIAA1522Q9P206 1035 aaPredicted RBP11.08□□□□□ -0.64
ZNF558-201ENST00000301475 IPO11Q9UI26 975 aaKnown RBP11.08□□□□□ -0.64
ZNF558-201ENST00000301475 ZDHHC2Q9UIJ5 367 aa11.08□□□□□ -0.64
ZNF558-201ENST00000301475 CNOT6Q9ULM6 557 aaKnown RBP11.08□□□□□ -0.64
ZNF558-201ENST00000301475 PCDHGA7Q9Y5G6 932 aa11.08□□□□□ -0.64
ZNF558-201ENST00000301475 ANK1P16157 1881 aa11.08□□□□□ -0.64
ZNF558-201ENST00000301475 E7ENX8 843 aa11.08□□□□□ -0.64
ZNF558-201ENST00000301475 J3QRK9 145 aa11.08□□□□□ -0.64
ZNF558-201ENST00000301475 ZNF701M0R085 212 aaPredicted RBP11.08□□□□□ -0.64
ZNF558-201ENST00000301475 PIGNO95427 931 aa11.08□□□□□ -0.64
ZNF558-201ENST00000301475 EPHX2P34913 555 aa11.08□□□□□ -0.64
ZNF558-201ENST00000301475 ARL2P36404 184 aa11.08□□□□□ -0.64
ZNF558-201ENST00000301475 PGGT1BP53609 377 aa11.08□□□□□ -0.64
ZNF558-201ENST00000301475 AP3M2P53677 418 aa11.08□□□□□ -0.64
ZNF558-201ENST00000301475 C21orf59P57076 290 aa11.08□□□□□ -0.64
ZNF558-201ENST00000301475 RHDQ02161 417 aa11.08□□□□□ -0.64
ZNF558-201ENST00000301475 OLIG2Q13516 323 aa11.08□□□□□ -0.64
ZNF558-201ENST00000301475 CAPSQ13938 189 aa11.08□□□□□ -0.64
ZNF558-201ENST00000301475 TRIM25Q14258 630 aaKnown RBP11.08□□□□□ -0.64
ZNF558-201ENST00000301475 ARL13AQ5H913 290 aaPredicted RBP11.08□□□□□ -0.64
ZNF558-201ENST00000301475 ZNF362Q5T0B9 420 aaPredicted RBP11.08□□□□□ -0.64
ZNF558-201ENST00000301475 CYP2R1Q6VVX0 501 aa11.08□□□□□ -0.64
ZNF558-201ENST00000301475 CLEC14AQ86T13 490 aa11.08□□□□□ -0.64
ZNF558-201ENST00000301475 ZNF786Q8N393 782 aa11.08□□□□□ -0.64
ZNF558-201ENST00000301475 NETO2Q8NC67 525 aa11.08□□□□□ -0.64
ZNF558-201ENST00000301475 KCNN1Q92952 543 aa11.08□□□□□ -0.64
ZNF558-201ENST00000301475 FBXL8Q96CD0 374 aa11.08□□□□□ -0.64
ZNF558-201ENST00000301475 THAP11Q96EK4 314 aa11.08□□□□□ -0.64
ZNF558-201ENST00000301475 AGAP3Q96P47 875 aa11.08□□□□□ -0.64
ZNF558-201ENST00000301475 GPATCH1Q9BRR8 931 aaKnown RBP11.08□□□□□ -0.64
ZNF558-201ENST00000301475 CEP41Q9BYV8 373 aa11.08□□□□□ -0.64
ZNF558-201ENST00000301475 JPH1Q9HDC5 661 aaPredicted RBP11.08□□□□□ -0.64
ZNF558-201ENST00000301475 TXNDC16Q9P2K2 825 aa11.08□□□□□ -0.64
ZNF558-201ENST00000301475 RAP2CQ9Y3L5 183 aa11.08□□□□□ -0.64
ZNF558-201ENST00000301475 COL11A2P13942 1736 aaPredicted RBP11.08□□□□□ -0.64
ZNF558-201ENST00000301475 A0A096LPK6 155 aa11.07□□□□□ -0.64
ZNF558-201ENST00000301475 YDJCA8MPS7 323 aa11.07□□□□□ -0.64
ZNF558-201ENST00000301475 KCNU1A8MYU2 1149 aa11.07□□□□□ -0.64
ZNF558-201ENST00000301475 DLGAP1O14490 977 aa11.07□□□□□ -0.64
ZNF558-201ENST00000301475 ARSAP15289 507 aa11.07□□□□□ -0.64
ZNF558-201ENST00000301475 ZNF12P17014 697 aa11.07□□□□□ -0.64
ZNF558-201ENST00000301475 TFEBP19484 476 aa11.07□□□□□ -0.64
ZNF558-201ENST00000301475 GRM5P41594 1212 aa11.07□□□□□ -0.64
ZNF558-201ENST00000301475 RPL14P50914 215 aaKnown RBP11.07□□□□□ -0.64
ZNF558-201ENST00000301475 PSME3P61289 254 aa11.07□□□□□ -0.64
ZNF558-201ENST00000301475 BNIP3Q12983 259 aa11.07□□□□□ -0.64
ZNF558-201ENST00000301475 NAB1Q13506 487 aa11.07□□□□□ -0.64
ZNF558-201ENST00000301475 KIZQ2M2Z5 673 aa11.07□□□□□ -0.64
ZNF558-201ENST00000301475 XKR3Q5GH77 459 aa11.07□□□□□ -0.64
ZNF558-201ENST00000301475 OR6B2Q6IFH4 312 aa11.07□□□□□ -0.64
ZNF558-201ENST00000301475 ABHD15Q6UXT9 468 aa11.07□□□□□ -0.64
ZNF558-201ENST00000301475 CHSY3Q70JA7 882 aa11.07□□□□□ -0.64
ZNF558-201ENST00000301475 SLC7A14Q8TBB6 771 aa11.07□□□□□ -0.64
ZNF558-201ENST00000301475 LPGAT1Q92604 370 aa11.07□□□□□ -0.64
ZNF558-201ENST00000301475 TFAP2CQ92754 450 aa11.07□□□□□ -0.64
ZNF558-201ENST00000301475 FCRL3Q96P31 734 aaPredicted RBP11.07□□□□□ -0.64
ZNF558-201ENST00000301475 QKIQ96PU8 341 aaKnown RBP eCLIP11.07□□□□□ -0.64
ZNF558-201ENST00000301475 RBBP8Q99708 897 aa11.07□□□□□ -0.64
ZNF558-201ENST00000301475 ZNF670Q9BS34 389 aa11.07□□□□□ -0.64
ZNF558-201ENST00000301475 TCHPQ9BT92 498 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms