RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 SEMA3BQ13214 749 aa13.16□□□□□ -0.3
HIF3A-204ENST00000300862 SLC5A9Q2M3M2 681 aa13.16□□□□□ -0.3
HIF3A-204ENST00000300862 DNAL1Q4LDG9 190 aa13.16□□□□□ -0.3
HIF3A-204ENST00000300862 OTOP3Q7RTS5 596 aa13.16□□□□□ -0.3
HIF3A-204ENST00000300862 TMEM135Q86UB9 458 aa13.16□□□□□ -0.3
HIF3A-204ENST00000300862 HIPK4Q8NE63 616 aa13.16□□□□□ -0.3
HIF3A-204ENST00000300862 COLEC11Q9BWP8 271 aa13.16□□□□□ -0.3
HIF3A-204ENST00000300862 DNAI2Q9GZS0 605 aa13.16□□□□□ -0.3
HIF3A-204ENST00000300862 ZCWPW1Q9H0M4 648 aa13.16□□□□□ -0.3
HIF3A-204ENST00000300862 OR12D3Q9UGF7 316 aa13.16□□□□□ -0.3
HIF3A-204ENST00000300862 PDCD11Q14690 1871 aaKnown RBP13.16□□□□□ -0.3
HIF3A-204ENST00000300862 DCXO43602 365 aa13.16□□□□□ -0.3
HIF3A-204ENST00000300862 LRIG2O94898 1065 aa13.16□□□□□ -0.3
HIF3A-204ENST00000300862 C2P06681 752 aa13.16□□□□□ -0.3
HIF3A-204ENST00000300862 ANPEPP15144 967 aa13.16□□□□□ -0.3
HIF3A-204ENST00000300862 MX2P20592 715 aa13.16□□□□□ -0.3
HIF3A-204ENST00000300862 CYP2B6P20813 491 aa13.16□□□□□ -0.3
HIF3A-204ENST00000300862 LRPAP1P30533 357 aa13.16□□□□□ -0.3
HIF3A-204ENST00000300862 SPRP35270 261 aaPredicted RBP13.16□□□□□ -0.3
HIF3A-204ENST00000300862 LIMK2P53671 638 aa13.16□□□□□ -0.3
HIF3A-204ENST00000300862 ACTR3P61158 418 aa13.16□□□□□ -0.3
HIF3A-204ENST00000300862 CDK18Q07002 472 aa13.16□□□□□ -0.3
HIF3A-204ENST00000300862 PPIDQ08752 370 aaKnown RBP13.16□□□□□ -0.3
HIF3A-204ENST00000300862 PCBP1Q15365 356 aaKnown RBP eCLIP13.16□□□□□ -0.3
HIF3A-204ENST00000300862 PDPK2PQ6A1A2 396 aa13.16□□□□□ -0.3
HIF3A-204ENST00000300862 ARHGAP36Q6ZRI8 547 aa13.16□□□□□ -0.3
HIF3A-204ENST00000300862 NET1Q7Z628 596 aaPredicted RBP13.16□□□□□ -0.3
HIF3A-204ENST00000300862 SPATA22Q8NHS9 363 aa13.16□□□□□ -0.3
HIF3A-204ENST00000300862 MAPK15Q8TD08 544 aa13.16□□□□□ -0.3
HIF3A-204ENST00000300862 UNKQ9C0B0 810 aaKnown RBP13.16□□□□□ -0.3
HIF3A-204ENST00000300862 SIK2Q9H0K1 926 aa13.16□□□□□ -0.3
HIF3A-204ENST00000300862 WDCPQ9H6R7 721 aa13.16□□□□□ -0.3
HIF3A-204ENST00000300862 SLC39A10Q9ULF5 831 aa13.16□□□□□ -0.3
HIF3A-204ENST00000300862 G3BP2Q9UN86 482 aaKnown RBP13.16□□□□□ -0.3
HIF3A-204ENST00000300862 SF3B1O75533 1304 aaKnown RBP eCLIP13.16□□□□□ -0.3
HIF3A-204ENST00000300862 GOLGA8QA0A0J9YX86 632 aa13.15□□□□□ -0.3
HIF3A-204ENST00000300862 GOLGA8OA6NCC3 632 aa13.15□□□□□ -0.3
HIF3A-204ENST00000300862 GOLGA8NF8WBI6 632 aa13.15□□□□□ -0.3
HIF3A-204ENST00000300862 MAP3K7O43318 606 aa13.15□□□□□ -0.3
HIF3A-204ENST00000300862 GRK2P25098 689 aa13.15□□□□□ -0.3
HIF3A-204ENST00000300862 AVPR1AP37288 418 aa13.15□□□□□ -0.3
HIF3A-204ENST00000300862 SERPINB8P50452 374 aa13.15□□□□□ -0.3
HIF3A-204ENST00000300862 COPAP53621 1224 aa13.15□□□□□ -0.3
HIF3A-204ENST00000300862 ITGA7Q13683 1181 aa13.15□□□□□ -0.3
HIF3A-204ENST00000300862 TRMT5Q32P41 509 aaKnown RBP13.15□□□□□ -0.3
HIF3A-204ENST00000300862 SLC9B1Q4ZJI4 515 aa13.15□□□□□ -0.3
HIF3A-204ENST00000300862 KCTD11Q693B1 232 aa13.15□□□□□ -0.3
HIF3A-204ENST00000300862 RWDD4Q6NW29 188 aaKnown RBP13.15□□□□□ -0.3
HIF3A-204ENST00000300862 ANKRD23Q86SG2 305 aa13.15□□□□□ -0.3
HIF3A-204ENST00000300862 KCNMB4Q86W47 210 aa13.15□□□□□ -0.3
HIF3A-204ENST00000300862 PPFIBP2Q8ND30 876 aa13.15□□□□□ -0.3
HIF3A-204ENST00000300862 HASPINQ8TF76 798 aa13.15□□□□□ -0.3
HIF3A-204ENST00000300862 PYDC1Q8WXC3 89 aa13.15□□□□□ -0.3
HIF3A-204ENST00000300862 RNF34Q969K3 372 aa13.15□□□□□ -0.3
HIF3A-204ENST00000300862 ZNF184Q99676 751 aaPredicted RBP13.15□□□□□ -0.3
HIF3A-204ENST00000300862 COG4Q9H9E3 785 aa13.15□□□□□ -0.3
HIF3A-204ENST00000300862 CASS4Q9NQ75 786 aa13.15□□□□□ -0.3
HIF3A-204ENST00000300862 PACSIN3Q9UKS6 424 aa13.15□□□□□ -0.3
HIF3A-204ENST00000300862 C17orf102A2RUQ5 167 aa13.15□□□□□ -0.3
HIF3A-204ENST00000300862 MAGEA13PA6NCF6 341 aa13.15□□□□□ -0.3
HIF3A-204ENST00000300862 G3V2L1 256 aa13.15□□□□□ -0.3
HIF3A-204ENST00000300862 PHGDHO43175 533 aaKnown RBP13.15□□□□□ -0.3
HIF3A-204ENST00000300862 HSPA4LO95757 839 aa13.15□□□□□ -0.3
HIF3A-204ENST00000300862 CHRNGP07510 517 aa13.15□□□□□ -0.3
HIF3A-204ENST00000300862 UBTFL6P0CB48 400 aaPredicted RBP13.15□□□□□ -0.3
HIF3A-204ENST00000300862 ZNF865P0CJ78 1059 aaPredicted RBP13.15□□□□□ -0.3
HIF3A-204ENST00000300862 GLRBP48167 497 aa13.15□□□□□ -0.3
HIF3A-204ENST00000300862 MPP3Q13368 585 aa13.15□□□□□ -0.3
HIF3A-204ENST00000300862 NAB1Q13506 487 aa13.15□□□□□ -0.3
HIF3A-204ENST00000300862 INSCQ1MX18 579 aa13.15□□□□□ -0.3
HIF3A-204ENST00000300862 FAM110CQ1W6H9 321 aa13.15□□□□□ -0.3
HIF3A-204ENST00000300862 LRRC36Q1X8D7 754 aa13.15□□□□□ -0.3
HIF3A-204ENST00000300862 C6orf163Q5TEZ5 329 aa13.15□□□□□ -0.3
HIF3A-204ENST00000300862 PDZD4Q76G19 769 aaPredicted RBP13.15□□□□□ -0.3
HIF3A-204ENST00000300862 KDELC2Q7Z4H8 507 aa13.15□□□□□ -0.3
HIF3A-204ENST00000300862 MYLK4Q86YV6 388 aaPredicted RBP13.15□□□□□ -0.3
HIF3A-204ENST00000300862 URGCPQ8TCY9 931 aa13.15□□□□□ -0.3
HIF3A-204ENST00000300862 APBA2Q99767 749 aa13.15□□□□□ -0.3
HIF3A-204ENST00000300862 GBA3Q9H227 469 aa13.15□□□□□ -0.3
HIF3A-204ENST00000300862 ZNF212Q9UDV6 495 aa13.15□□□□□ -0.3
HIF3A-204ENST00000300862 F8W8V4 182 aa13.14□□□□□ -0.31
HIF3A-204ENST00000300862 TK2O00142 265 aa13.14□□□□□ -0.31
HIF3A-204ENST00000300862 HAS3O00219 553 aa13.14□□□□□ -0.31
HIF3A-204ENST00000300862 ZBTB14O43829 449 aa13.14□□□□□ -0.31
HIF3A-204ENST00000300862 HARS2P49590 506 aaKnown RBP13.14□□□□□ -0.31
HIF3A-204ENST00000300862 TBCCQ15814 346 aa13.14□□□□□ -0.31
HIF3A-204ENST00000300862 RAPH1Q70E73 1250 aa13.14□□□□□ -0.31
HIF3A-204ENST00000300862 BHLHA9Q7RTU4 235 aa13.14□□□□□ -0.31
HIF3A-204ENST00000300862 SPATA6LQ8N4H0 392 aa13.14□□□□□ -0.31
HIF3A-204ENST00000300862 CNTD1Q8N815 330 aa13.14□□□□□ -0.31
HIF3A-204ENST00000300862 VPS39Q96JC1 886 aa13.14□□□□□ -0.31
HIF3A-204ENST00000300862 SLC9A7Q96T83 725 aa13.14□□□□□ -0.31
HIF3A-204ENST00000300862 PARK7Q99497 189 aaKnown RBP13.14□□□□□ -0.31
HIF3A-204ENST00000300862 DDX50Q9BQ39 737 aaKnown RBP13.14□□□□□ -0.31
HIF3A-204ENST00000300862 DFFAO00273 331 aa13.14□□□□□ -0.31
HIF3A-204ENST00000300862 NEMP1O14524 444 aa13.14□□□□□ -0.31
HIF3A-204ENST00000300862 KLHL2O95198 593 aa13.14□□□□□ -0.31
HIF3A-204ENST00000300862 MT-CYBP00156 380 aaPredicted RBP13.14□□□□□ -0.31
HIF3A-204ENST00000300862 BDNFP23560 247 aa13.14□□□□□ -0.31
HIF3A-204ENST00000300862 SCNN1GP51170 649 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms