RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 CDK16Q00536 496 aa15.68■□□□□ 0.1
FNDC1-201ENST00000297267 APOBEC3HQ6NTF7 200 aaKnown RBP15.68■□□□□ 0.1
FNDC1-201ENST00000297267 TRAPPC5Q8IUR0 188 aa15.68■□□□□ 0.1
FNDC1-201ENST00000297267 KRT78Q8N1N4 520 aa15.68■□□□□ 0.1
FNDC1-201ENST00000297267 SLC35C1Q96A29 364 aa15.68■□□□□ 0.1
FNDC1-201ENST00000297267 ADAM2Q99965 735 aa15.68■□□□□ 0.1
FNDC1-201ENST00000297267 NMRAL1Q9HBL8 299 aa15.68■□□□□ 0.1
FNDC1-201ENST00000297267 FAM198AQ9UFP1 575 aa15.68■□□□□ 0.1
FNDC1-201ENST00000297267 CD84Q9UIB8 345 aa15.68■□□□□ 0.1
FNDC1-201ENST00000297267 CNTNAP4Q9C0A0 1308 aa15.68■□□□□ 0.1
FNDC1-201ENST00000297267 UBXN8O00124 270 aa15.68■□□□□ 0.1
FNDC1-201ENST00000297267 KPNA3O00505 521 aaPredicted RBP15.68■□□□□ 0.1
FNDC1-201ENST00000297267 FOXP2O15409 715 aa15.68■□□□□ 0.1
FNDC1-201ENST00000297267 EPHA3P29320 983 aa15.68■□□□□ 0.1
FNDC1-201ENST00000297267 GRIA4P48058 902 aa15.68■□□□□ 0.1
FNDC1-201ENST00000297267 TGFB2P61812 414 aa15.68■□□□□ 0.1
FNDC1-201ENST00000297267 SLC6A3Q01959 620 aa15.68■□□□□ 0.1
FNDC1-201ENST00000297267 ITGB3BPQ13352 177 aaPredicted RBP15.68■□□□□ 0.1
FNDC1-201ENST00000297267 MTSS1LQ765P7 747 aa15.68■□□□□ 0.1
FNDC1-201ENST00000297267 TTC7BQ86TV6 843 aa15.68■□□□□ 0.1
FNDC1-201ENST00000297267 HELQQ8TDG4 1101 aa15.68■□□□□ 0.1
FNDC1-201ENST00000297267 C18orf25Q96B23 403 aaPredicted RBP15.68■□□□□ 0.1
FNDC1-201ENST00000297267 H7C4K7 107 aa15.68■□□□□ 0.1
FNDC1-201ENST00000297267 YWHAZP63104 245 aaKnown RBP15.68■□□□□ 0.1
FNDC1-201ENST00000297267 LDLRAP1Q5SW96 308 aa15.68■□□□□ 0.1
FNDC1-201ENST00000297267 TREML2Q5T2D2 321 aa15.68■□□□□ 0.1
FNDC1-201ENST00000297267 VWA5B1Q5TIE3 1220 aa15.68■□□□□ 0.1
FNDC1-201ENST00000297267 KLHL5Q96PQ7 755 aa15.68■□□□□ 0.1
FNDC1-201ENST00000297267 CATSPERZQ9NTU4 200 aa15.68■□□□□ 0.1
FNDC1-201ENST00000297267 TRUB2O95900 331 aaKnown RBP15.68■□□□□ 0.1
FNDC1-201ENST00000297267 ERBB2P04626 1255 aa15.68■□□□□ 0.1
FNDC1-201ENST00000297267 IL1R1P14778 569 aa15.68■□□□□ 0.1
FNDC1-201ENST00000297267 FASP25445 335 aa15.68■□□□□ 0.1
FNDC1-201ENST00000297267 LHX1P48742 406 aa15.68■□□□□ 0.1
FNDC1-201ENST00000297267 CASP9P55211 416 aa15.68■□□□□ 0.1
FNDC1-201ENST00000297267 HSPA14Q0VDF9 509 aa15.68■□□□□ 0.1
FNDC1-201ENST00000297267 METTL7BQ6UX53 244 aa15.68■□□□□ 0.1
FNDC1-201ENST00000297267 GMCL1Q96IK5 515 aa15.68■□□□□ 0.1
FNDC1-201ENST00000297267 RHOBTB2Q9BYZ6 727 aa15.68■□□□□ 0.1
FNDC1-201ENST00000297267 MAP3K13O43283 966 aa15.67■□□□□ 0.1
FNDC1-201ENST00000297267 SPOCK2Q92563 424 aa15.67■□□□□ 0.1
FNDC1-201ENST00000297267 TRBV23OR9-2A0A075B6M9 112 aa15.67■□□□□ 0.1
FNDC1-201ENST00000297267 CHURC1-FNTBB4DL54 471 aa15.67■□□□□ 0.1
FNDC1-201ENST00000297267 MFN2O95140 757 aa15.67■□□□□ 0.1
FNDC1-201ENST00000297267 USP39Q53GS9 565 aaKnown RBP15.67■□□□□ 0.1
FNDC1-201ENST00000297267 CMC1Q7Z7K0 106 aa15.67■□□□□ 0.1
FNDC1-201ENST00000297267 BATF3Q9NR55 127 aa15.67■□□□□ 0.1
FNDC1-201ENST00000297267 OSER1Q9NX31 292 aa15.67■□□□□ 0.1
FNDC1-201ENST00000297267 CYP39A1Q9NYL5 469 aa15.67■□□□□ 0.1
FNDC1-201ENST00000297267 CACTIN-AS1Q8N1I8 211 aa15.67■□□□□ 0.1
FNDC1-201ENST00000297267 ITFG1Q8TB96 612 aa15.67■□□□□ 0.1
FNDC1-201ENST00000297267 PLK2Q9NYY3 685 aa15.67■□□□□ 0.1
FNDC1-201ENST00000297267 NRP2O60462 931 aa15.67■□□□□ 0.1
FNDC1-201ENST00000297267 TBL1XO60907 577 aa15.67■□□□□ 0.1
FNDC1-201ENST00000297267 FYNP06241 537 aa15.67■□□□□ 0.1
FNDC1-201ENST00000297267 COX7A2P14406 83 aa15.67■□□□□ 0.1
FNDC1-201ENST00000297267 YWHAQP27348 245 aa15.67■□□□□ 0.1
FNDC1-201ENST00000297267 CDC42EP1Q00587 391 aa15.67■□□□□ 0.1
FNDC1-201ENST00000297267 ZNF460Q14592 562 aa15.67■□□□□ 0.1
FNDC1-201ENST00000297267 MTX3Q5HYI7 312 aa15.67■□□□□ 0.1
FNDC1-201ENST00000297267 WDR36Q8NI36 951 aaKnown RBP15.67■□□□□ 0.1
FNDC1-201ENST00000297267 TEKT5Q96M29 485 aa15.67■□□□□ 0.1
FNDC1-201ENST00000297267 PDP2Q9P2J9 529 aa15.67■□□□□ 0.1
FNDC1-201ENST00000297267 EFNA1P20827 205 aaPredicted RBP15.67■□□□□ 0.1
FNDC1-201ENST00000297267 MARSP56192 900 aaKnown RBP15.67■□□□□ 0.1
FNDC1-201ENST00000297267 FASTKD3Q14CZ7 662 aaKnown RBP15.67■□□□□ 0.1
FNDC1-201ENST00000297267 LRRC73Q5JTD7 316 aa15.67■□□□□ 0.1
FNDC1-201ENST00000297267 SPANXN3Q5MJ09 141 aa15.67■□□□□ 0.1
FNDC1-201ENST00000297267 GPSM1Q86YR5 675 aa15.67■□□□□ 0.1
FNDC1-201ENST00000297267 PAPOLBQ9NRJ5 636 aaKnown RBP15.67■□□□□ 0.1
FNDC1-201ENST00000297267 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.67■□□□□ 0.1
FNDC1-201ENST00000297267 GPSM3Q9Y4H4 160 aa15.67■□□□□ 0.1
FNDC1-201ENST00000297267 PSMG1O95456 288 aa15.66■□□□□ 0.1
FNDC1-201ENST00000297267 SNRPFP62306 86 aaKnown RBP15.66■□□□□ 0.1
FNDC1-201ENST00000297267 INAQ16352 499 aa15.66■□□□□ 0.1
FNDC1-201ENST00000297267 POMZP3Q6PJE2 187 aa15.66■□□□□ 0.1
FNDC1-201ENST00000297267 EID3Q8N140 333 aa15.66■□□□□ 0.1
FNDC1-201ENST00000297267 PMM1Q92871 262 aa15.66■□□□□ 0.1
FNDC1-201ENST00000297267 SMARCD1Q96GM5 515 aa15.66■□□□□ 0.1
FNDC1-201ENST00000297267 FAR2Q96K12 515 aa15.66■□□□□ 0.1
FNDC1-201ENST00000297267 COQ7Q99807 217 aa15.66■□□□□ 0.1
FNDC1-201ENST00000297267 TMEM191CA6NGB0 347 aa15.66■□□□□ 0.1
FNDC1-201ENST00000297267 CLOCKO15516 846 aa15.66■□□□□ 0.1
FNDC1-201ENST00000297267 GLRA2P23416 452 aa15.66■□□□□ 0.1
FNDC1-201ENST00000297267 ACVR2BQ13705 512 aa15.66■□□□□ 0.1
FNDC1-201ENST00000297267 FAM98BQ52LJ0 330 aaKnown RBP15.66■□□□□ 0.1
FNDC1-201ENST00000297267 SYT12Q8IV01 421 aa15.66■□□□□ 0.1
FNDC1-201ENST00000297267 FAM126BQ8IXS8 530 aa15.66■□□□□ 0.1
FNDC1-201ENST00000297267 CERS4Q9HA82 394 aa15.66■□□□□ 0.1
FNDC1-201ENST00000297267 PDZK1Q5T2W1 519 aa15.66■□□□□ 0.1
FNDC1-201ENST00000297267 ANKS6Q68DC2 871 aa15.66■□□□□ 0.1
FNDC1-201ENST00000297267 GK5Q6ZS86 529 aa15.66■□□□□ 0.1
FNDC1-201ENST00000297267 BTN2A1Q7KYR7 527 aa15.66■□□□□ 0.1
FNDC1-201ENST00000297267 ETNPPLQ8TBG4 499 aa15.66■□□□□ 0.1
FNDC1-201ENST00000297267 C17orf75Q9HAS0 396 aa15.66■□□□□ 0.1
FNDC1-201ENST00000297267 TBC1D13Q9NVG8 400 aa15.66■□□□□ 0.1
FNDC1-201ENST00000297267 THAP1Q9NVV9 213 aa15.66■□□□□ 0.1
FNDC1-201ENST00000297267 AFDNP55196 1824 aaKnown RBP15.66■□□□□ 0.1
FNDC1-201ENST00000297267 SALL3Q9BXA9 1300 aa15.66■□□□□ 0.1
FNDC1-201ENST00000297267 SERPINE1P05121 402 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms