RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 SESN3P58005 492 aa12.01□□□□□ -0.49
RHO-201ENST00000296271 GRM3Q14832 879 aa12.01□□□□□ -0.49
RHO-201ENST00000296271 ATG16L1Q676U5 607 aa12.01□□□□□ -0.49
RHO-201ENST00000296271 KCNMB4Q86W47 210 aa12.01□□□□□ -0.49
RHO-201ENST00000296271 CRLF3Q8IUI8 442 aa12.01□□□□□ -0.49
RHO-201ENST00000296271 MAGEC3Q8TD91 643 aa12.01□□□□□ -0.49
RHO-201ENST00000296271 RAB3IPQ96QF0 476 aaPredicted RBP12.01□□□□□ -0.49
RHO-201ENST00000296271 NUDCD1Q96RS6 583 aa12.01□□□□□ -0.49
RHO-201ENST00000296271 RBBP8Q99708 897 aa12.01□□□□□ -0.49
RHO-201ENST00000296271 BTBD10Q9BSF8 475 aa12.01□□□□□ -0.49
RHO-201ENST00000296271 UPF3AQ9H1J1 476 aaKnown RBP12.01□□□□□ -0.49
RHO-201ENST00000296271 EBF2Q9HAK2 575 aa12.01□□□□□ -0.49
RHO-201ENST00000296271 SPC25Q9HBM1 224 aa12.01□□□□□ -0.49
RHO-201ENST00000296271 MCM8Q9UJA3 840 aa12.01□□□□□ -0.49
RHO-201ENST00000296271 NYNRINQ9P2P1 1898 aaKnown RBP12.01□□□□□ -0.49
RHO-201ENST00000296271 CAPN14A8MX76 684 aa12□□□□□ -0.49
RHO-201ENST00000296271 B2RBV5 119 aa12□□□□□ -0.49
RHO-201ENST00000296271 CCL22O00626 93 aa12□□□□□ -0.49
RHO-201ENST00000296271 AURKAO14965 403 aa12□□□□□ -0.49
RHO-201ENST00000296271 MAFKO60675 156 aa12□□□□□ -0.49
RHO-201ENST00000296271 SORBS2O94875 1100 aaKnown RBP12□□□□□ -0.49
RHO-201ENST00000296271 OR1G1P47890 313 aa12□□□□□ -0.49
RHO-201ENST00000296271 MAXP61244 160 aa12□□□□□ -0.49
RHO-201ENST00000296271 MPP1Q00013 466 aa12□□□□□ -0.49
RHO-201ENST00000296271 EIF4EBP2Q13542 120 aaPredicted RBP12□□□□□ -0.49
RHO-201ENST00000296271 IHHQ14623 411 aa12□□□□□ -0.49
RHO-201ENST00000296271 KPNB1Q14974 876 aaKnown RBP12□□□□□ -0.49
RHO-201ENST00000296271 PCSK7Q16549 785 aa12□□□□□ -0.49
RHO-201ENST00000296271 TRIM71Q2Q1W2 868 aaKnown RBP12□□□□□ -0.49
RHO-201ENST00000296271 BTBD8Q5XKL5 378 aa12□□□□□ -0.49
RHO-201ENST00000296271 CYS1Q717R9 158 aa12□□□□□ -0.49
RHO-201ENST00000296271 ZNF598Q86UK7 904 aaKnown RBP12□□□□□ -0.49
RHO-201ENST00000296271 CIR1Q86X95 450 aaPredicted RBP12□□□□□ -0.49
RHO-201ENST00000296271 SPATA2LQ8IUW3 424 aaPredicted RBP12□□□□□ -0.49
RHO-201ENST00000296271 MFSD6LQ8IWD5 586 aa12□□□□□ -0.49
RHO-201ENST00000296271 ATAD1Q8NBU5 361 aa12□□□□□ -0.49
RHO-201ENST00000296271 ZNF570Q96NI8 536 aa12□□□□□ -0.49
RHO-201ENST00000296271 SAR1AQ9NR31 198 aa12□□□□□ -0.49
RHO-201ENST00000296271 LNPEPQ9UIQ6 1025 aa12□□□□□ -0.49
RHO-201ENST00000296271 SLC39A10Q9ULF5 831 aa12□□□□□ -0.49
RHO-201ENST00000296271 MTF2Q9Y483 593 aaPredicted RBP12□□□□□ -0.49
RHO-201ENST00000296271 A0A096LPK6 155 aa12□□□□□ -0.49
RHO-201ENST00000296271 TRAFD1O14545 582 aaPredicted RBP12□□□□□ -0.49
RHO-201ENST00000296271 ATP5HO75947 161 aa12□□□□□ -0.49
RHO-201ENST00000296271 IGLV3-25P01717 112 aa12□□□□□ -0.49
RHO-201ENST00000296271 CYP11A1P05108 521 aa12□□□□□ -0.49
RHO-201ENST00000296271 HLA-DQB2P05538 268 aa12□□□□□ -0.49
RHO-201ENST00000296271 EZRP15311 586 aaKnown RBP12□□□□□ -0.49
RHO-201ENST00000296271 HCAR3P49019 387 aa12□□□□□ -0.49
RHO-201ENST00000296271 YWHAHQ04917 246 aaPredicted RBP12□□□□□ -0.49
RHO-201ENST00000296271 TUBB3Q13509 450 aa12□□□□□ -0.49
RHO-201ENST00000296271 SPANXN3Q5MJ09 141 aa12□□□□□ -0.49
RHO-201ENST00000296271 ESRP1Q6NXG1 681 aaKnown RBP12□□□□□ -0.49
RHO-201ENST00000296271 DCLRE1AQ6PJP8 1040 aa12□□□□□ -0.49
RHO-201ENST00000296271 EFCAB3Q8N7B9 438 aa12□□□□□ -0.49
RHO-201ENST00000296271 RBM15BQ8NDT2 890 aaKnown RBP12□□□□□ -0.49
RHO-201ENST00000296271 KLHDC9Q8NEP7 349 aa12□□□□□ -0.49
RHO-201ENST00000296271 KLHL5Q96PQ7 755 aa12□□□□□ -0.49
RHO-201ENST00000296271 FERMT1Q9BQL6 677 aa12□□□□□ -0.49
RHO-201ENST00000296271 FICDQ9BVA6 458 aa12□□□□□ -0.49
RHO-201ENST00000296271 KCNK4Q9NYG8 393 aa12□□□□□ -0.49
RHO-201ENST00000296271 COPG2Q9UBF2 871 aa12□□□□□ -0.49
RHO-201ENST00000296271 SLC27A5Q9Y2P5 690 aa12□□□□□ -0.49
RHO-201ENST00000296271 C15orf41Q9Y2V0 281 aa12□□□□□ -0.49
RHO-201ENST00000296271 HS3ST4Q9Y661 456 aa12□□□□□ -0.49
RHO-201ENST00000296271 TET1Q8NFU7 2136 aa11.99□□□□□ -0.49
RHO-201ENST00000296271 TK2O00142 265 aa11.99□□□□□ -0.49
RHO-201ENST00000296271 CA12O43570 354 aa11.99□□□□□ -0.49
RHO-201ENST00000296271 AOC2O75106 756 aa11.99□□□□□ -0.49
RHO-201ENST00000296271 GLRA3O75311 464 aa11.99□□□□□ -0.49
RHO-201ENST00000296271 ZMPSTE24O75844 475 aa11.99□□□□□ -0.49
RHO-201ENST00000296271 KRT36O76013 467 aa11.99□□□□□ -0.49
RHO-201ENST00000296271 CNTN5O94779 1100 aa11.99□□□□□ -0.49
RHO-201ENST00000296271 F9P00740 461 aa11.99□□□□□ -0.49
RHO-201ENST00000296271 C2P06681 752 aa11.99□□□□□ -0.49
RHO-201ENST00000296271 HMBSP08397 361 aa11.99□□□□□ -0.49
RHO-201ENST00000296271 CCND1P24385 295 aa11.99□□□□□ -0.49
RHO-201ENST00000296271 TUBP50607 506 aa11.99□□□□□ -0.49
RHO-201ENST00000296271 FCGRTP55899 365 aa11.99□□□□□ -0.49
RHO-201ENST00000296271 GRIK3Q13003 919 aa11.99□□□□□ -0.49
RHO-201ENST00000296271 ACSBG2Q5FVE4 666 aa11.99□□□□□ -0.49
RHO-201ENST00000296271 DENND5AQ6IQ26 1287 aa11.99□□□□□ -0.49
RHO-201ENST00000296271 C4orf50Q6ZRC1 276 aa11.99□□□□□ -0.49
RHO-201ENST00000296271 PDZD4Q76G19 769 aaPredicted RBP11.99□□□□□ -0.49
RHO-201ENST00000296271 DTX3LQ8TDB6 740 aa11.99□□□□□ -0.49
RHO-201ENST00000296271 MYEOVQ96EZ4 313 aa11.99□□□□□ -0.49
RHO-201ENST00000296271 THAP1Q9NVV9 213 aa11.99□□□□□ -0.49
RHO-201ENST00000296271 NT5C1B-RDH14C9J2C7 533 aa11.99□□□□□ -0.49
RHO-201ENST00000296271 KPNA6O60684 536 aa11.99□□□□□ -0.49
RHO-201ENST00000296271 CCDC22O60826 627 aa11.99□□□□□ -0.49
RHO-201ENST00000296271 VAPBO95292 243 aa11.99□□□□□ -0.49
RHO-201ENST00000296271 CHRNGP07510 517 aa11.99□□□□□ -0.49
RHO-201ENST00000296271 FAM163BP0C2L3 166 aa11.99□□□□□ -0.49
RHO-201ENST00000296271 TPBGLP0DKB5 382 aa11.99□□□□□ -0.49
RHO-201ENST00000296271 ARNTP27540 789 aa11.99□□□□□ -0.49
RHO-201ENST00000296271 LIMK2P53671 638 aa11.99□□□□□ -0.49
RHO-201ENST00000296271 MPP3Q13368 585 aa11.99□□□□□ -0.49
RHO-201ENST00000296271 PIK3R6Q5UE93 754 aa11.99□□□□□ -0.49
RHO-201ENST00000296271 TLDC1Q6P9B6 456 aa11.99□□□□□ -0.49
RHO-201ENST00000296271 KYAT3Q6YP21 454 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms