RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 ERMARDQ5T6L9 678 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 GRTP1Q5TC63 336 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 TMC7Q7Z402 723 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 ADGRE3Q9BY15 652 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 RTFDC1Q9BY42 306 aaPredicted RBP10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 BTN3A3O00478 584 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 SSNA1O43805 119 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 ATP5BP06576 529 aaKnown RBP10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 GTF2E2P29084 291 aaKnown RBP10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 GRK4P32298 578 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 PLK1P53350 603 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 SPIDRQ14159 915 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 PDK3Q15120 406 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 QPRTQ15274 297 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 TKFCQ3LXA3 575 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 SLC45A4Q5BKX6 768 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 ZNF621Q6ZSS3 439 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 KCNMB4Q86W47 210 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 HIPK1Q86Z02 1210 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 ADHFE1Q8IWW8 467 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 ZNF276Q8N554 614 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 FBXO30Q8TB52 745 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 TMEM138Q9NPI0 162 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 AHSPQ9NZD4 102 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 PRELID1Q9Y255 219 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 N6AMT1Q9Y5N5 214 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 A0A1W2PRG6 482 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 UBE2QL1A1L167 161 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 MSH4O15457 936 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 B3GAT3O94766 335 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 ITGB6P18564 788 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 CYP2F1P24903 491 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 AMPD2Q01433 879 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 CDH17Q12864 832 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 BROXQ5VW32 411 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 LIN54Q6MZP7 749 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 NT5DC3Q86UY8 548 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 PROSER1Q86XN7 944 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 MYOZ2Q9NPC6 264 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 PIH1D1Q9NWS0 290 aaKnown RBP10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 ZNF180Q9UJW8 692 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 WDR27A2RRH5 827 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 GRIN3BO60391 1043 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 TMCC2O75069 709 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 ALADP13716 330 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 CCR1P32246 355 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 NEK3P51956 506 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 RHOAP61586 193 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 ZIK1Q3SY52 487 aaPredicted RBP10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 MTSS1LQ765P7 747 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 ZNF438Q7Z4V0 828 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 PEG10Q86TG7 708 aaKnown RBP10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 TMEM132CQ8N3T6 1108 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 SFRP1Q8N474 314 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 TSEN2Q8NCE0 465 aaKnown RBP10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 OR56A4Q8NGH8 313 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 FAM151AQ8WW52 585 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 ZDHHC15Q96MV8 337 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 POP1Q99575 1024 aaKnown RBP10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 RPRD1BQ9NQG5 326 aaKnown RBP10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 KCNK4Q9NYG8 393 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 INVSQ9Y283 1065 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 AKAP3O75969 853 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 PIGNO95427 931 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 FAM86B2P0C5J1 330 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 MSL3P1P0C860 447 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 ODC1P11926 461 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 CRABP2P29373 138 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 IL12AP29459 219 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 S100A3P33764 101 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 BCAT1P54687 386 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 TGM3Q08188 693 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 CBWD3Q5JTY5 395 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 CBWD5Q5RIA9 395 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 CDKAL1Q5VV42 579 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 MZT2AQ6P582 158 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 BCL2L14Q9BZR8 327 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 PHF24Q9UPV7 400 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 NWD2Q9ULI1 1742 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 DNM1LO00429 736 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 SNX3O60493 162 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 MED24O75448 989 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 RECQL5O94762 991 aaPredicted RBP10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 RARAP10276 462 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 MGAT1P26572 445 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 ADSSP30520 456 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 CDK7P50613 346 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 SLC25A3Q00325 362 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 TOP3AQ13472 1001 aaPredicted RBP10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 PLCL1Q15111 1095 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 RNF43Q68DV7 783 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 ZNF470Q6ECI4 717 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 LRRC17Q8N6Y2 441 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 PROX1Q92786 737 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 MAGEB10Q96LZ2 347 aaPredicted RBP10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 TLR10Q9BXR5 811 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 LRMDAQ9H2I8 198 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 NMRAL1Q9HBL8 299 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 TBC1D13Q9NVG8 400 aa10.9□□□□□ -0.66
PKNOX1-201ENST00000291547 PTTG2Q9NZH5 202 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms