RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 KLC2Q9H0B6 622 aa27.53■■■□□ 2
SSU72-201ENST00000291386 ADGRG1Q9Y653 693 aa27.53■■■□□ 2
SSU72-201ENST00000291386 DUSP10Q9Y6W6 482 aa27.53■■■□□ 2
SSU72-201ENST00000291386 EML5Q05BV3 1969 aa27.53■■■□□ 2
SSU72-201ENST00000291386 TARSL2A2RTX5 802 aaKnown RBP27.52■■■□□ 2
SSU72-201ENST00000291386 GABRG2P18507 467 aa27.52■■■□□ 2
SSU72-201ENST00000291386 CLCN6P51797 869 aa27.52■■■□□ 2
SSU72-201ENST00000291386 CCZ1BP86790 482 aa27.52■■■□□ 2
SSU72-201ENST00000291386 CCZ1P86791 482 aaPredicted RBP27.52■■■□□ 2
SSU72-201ENST00000291386 KIF5AQ12840 1032 aa27.52■■■□□ 2
SSU72-201ENST00000291386 KRT81Q14533 505 aa27.52■■■□□ 2
SSU72-201ENST00000291386 AFMIDQ63HM1 303 aa27.52■■■□□ 2
SSU72-201ENST00000291386 RETSATQ6NUM9 610 aa27.52■■■□□ 2
SSU72-201ENST00000291386 MAP7D3Q8IWC1 876 aa27.52■■■□□ 2
SSU72-201ENST00000291386 SH2D3CQ8N5H7 860 aa27.52■■■□□ 2
SSU72-201ENST00000291386 LZTR1Q8N653 840 aa27.52■■■□□ 2
SSU72-201ENST00000291386 FRS2Q8WU20 508 aa27.52■■■□□ 2
SSU72-201ENST00000291386 LRRC19Q9H756 370 aa27.52■■■□□ 2
SSU72-201ENST00000291386 PRSS16Q9NQE7 514 aa27.52■■■□□ 2
SSU72-201ENST00000291386 NUP205Q92621 2012 aa27.51■■■□□ 2
SSU72-201ENST00000291386 EDDM13A0A1B0GTR0 161 aa27.51■■□□□ 1.99
SSU72-201ENST00000291386 TTC34A8MYJ7 566 aa27.51■■□□□ 1.99
SSU72-201ENST00000291386 DCLK1O15075 740 aa27.51■■□□□ 1.99
SSU72-201ENST00000291386 ZBTB24O43167 697 aaPredicted RBP27.51■■□□□ 1.99
SSU72-201ENST00000291386 KDELR3O43731 214 aa27.51■■□□□ 1.99
SSU72-201ENST00000291386 NRDCO43847 1150 aa27.51■■□□□ 1.99
SSU72-201ENST00000291386 NBL1P41271 181 aa27.51■■□□□ 1.99
SSU72-201ENST00000291386 PXNP49023 591 aaPredicted RBP27.51■■□□□ 1.99
SSU72-201ENST00000291386 NUMBP49757 651 aa27.51■■□□□ 1.99
SSU72-201ENST00000291386 COPAP53621 1224 aa27.51■■□□□ 1.99
SSU72-201ENST00000291386 ARF5P84085 180 aa27.51■■□□□ 1.99
SSU72-201ENST00000291386 DPYSL3Q14195 570 aa27.51■■□□□ 1.99
SSU72-201ENST00000291386 HEATR6Q6AI08 1181 aaKnown RBP27.51■■□□□ 1.99
SSU72-201ENST00000291386 IL31Q6EBC2 164 aa27.51■■□□□ 1.99
SSU72-201ENST00000291386 VSIG1Q86XK7 387 aa27.51■■□□□ 1.99
SSU72-201ENST00000291386 RHOT1Q8IXI2 618 aa27.51■■□□□ 1.99
SSU72-201ENST00000291386 ZNF366Q8N895 744 aa27.51■■□□□ 1.99
SSU72-201ENST00000291386 KCTD6Q8NC69 237 aa27.51■■□□□ 1.99
SSU72-201ENST00000291386 OR2T3Q8NH03 318 aa27.51■■□□□ 1.99
SSU72-201ENST00000291386 ATRIPQ8WXE1 791 aa27.51■■□□□ 1.99
SSU72-201ENST00000291386 PDLIM2Q96JY6 352 aa27.51■■□□□ 1.99
SSU72-201ENST00000291386 ZNF670Q9BS34 389 aa27.51■■□□□ 1.99
SSU72-201ENST00000291386 WDFY4Q6ZS81 3184 aa27.51■■□□□ 1.99
SSU72-201ENST00000291386 RASA4BC9J798 803 aa27.5■■□□□ 1.99
SSU72-201ENST00000291386 CBX4O00257 560 aa27.5■■□□□ 1.99
SSU72-201ENST00000291386 RASA4O43374 803 aa27.5■■□□□ 1.99
SSU72-201ENST00000291386 BUB1O43683 1085 aa27.5■■□□□ 1.99
SSU72-201ENST00000291386 SRCP12931 536 aa27.5■■□□□ 1.99
SSU72-201ENST00000291386 GLDCP23378 1020 aa27.5■■□□□ 1.99
SSU72-201ENST00000291386 METTL3Q86U44 580 aaKnown RBP27.5■■□□□ 1.99
SSU72-201ENST00000291386 HMGB4Q8WW32 186 aa27.5■■□□□ 1.99
SSU72-201ENST00000291386 PTPRN2Q92932 1015 aa27.5■■□□□ 1.99
SSU72-201ENST00000291386 FAF2Q96CS3 445 aa27.5■■□□□ 1.99
SSU72-201ENST00000291386 MRGPRX1Q96LB2 322 aa27.5■■□□□ 1.99
SSU72-201ENST00000291386 HPCAL4Q9UM19 191 aa27.5■■□□□ 1.99
SSU72-201ENST00000291386 NYNRINQ9P2P1 1898 aaKnown RBP27.5■■□□□ 1.99
SSU72-201ENST00000291386 ZSCAN5CA6NGD5 496 aaPredicted RBP27.49■■□□□ 1.99
SSU72-201ENST00000291386 ZNF487B1APH4 448 aa27.49■■□□□ 1.99
SSU72-201ENST00000291386 PSTPIP1O43586 416 aa27.49■■□□□ 1.99
SSU72-201ENST00000291386 SPOPO43791 374 aa27.49■■□□□ 1.99
SSU72-201ENST00000291386 MT-CO1P00395 513 aa27.49■■□□□ 1.99
SSU72-201ENST00000291386 CD48P09326 243 aa27.49■■□□□ 1.99
SSU72-201ENST00000291386 NDUFV2P19404 249 aa27.49■■□□□ 1.99
SSU72-201ENST00000291386 AMPD1P23109 780 aa27.49■■□□□ 1.99
SSU72-201ENST00000291386 KDELR1P24390 212 aa27.49■■□□□ 1.99
SSU72-201ENST00000291386 GJC1P36383 396 aa27.49■■□□□ 1.99
SSU72-201ENST00000291386 SERINC3Q13530 473 aa27.49■■□□□ 1.99
SSU72-201ENST00000291386 C9orf64Q5T6V5 341 aa27.49■■□□□ 1.99
SSU72-201ENST00000291386 MKRN2Q9H000 416 aaKnown RBP27.49■■□□□ 1.99
SSU72-201ENST00000291386 DDX56Q9NY93 547 aaKnown RBP27.49■■□□□ 1.99
SSU72-201ENST00000291386 BCCIPQ9P287 314 aaKnown RBP eCLIP27.49■■□□□ 1.99
SSU72-201ENST00000291386 PLXND1Q9Y4D7 1925 aa27.49■■□□□ 1.99
SSU72-201ENST00000291386 SIN3BO75182 1162 aa27.48■■□□□ 1.99
SSU72-201ENST00000291386 CD160O95971 181 aa27.48■■□□□ 1.99
SSU72-201ENST00000291386 SERPINH1P50454 418 aaKnown RBP27.48■■□□□ 1.99
SSU72-201ENST00000291386 GEMIN4P57678 1058 aaKnown RBP27.48■■□□□ 1.99
SSU72-201ENST00000291386 NHLH1Q02575 133 aa27.48■■□□□ 1.99
SSU72-201ENST00000291386 DLG2Q15700 870 aa27.48■■□□□ 1.99
SSU72-201ENST00000291386 IFI16Q16666 785 aaKnown RBP27.48■■□□□ 1.99
SSU72-201ENST00000291386 DAAM2Q86T65 1068 aa27.48■■□□□ 1.99
SSU72-201ENST00000291386 ARHGAP12Q8IWW6 846 aa27.48■■□□□ 1.99
SSU72-201ENST00000291386 NPWQ8N729 165 aa27.48■■□□□ 1.99
SSU72-201ENST00000291386 RAPGEF5Q92565 580 aa27.48■■□□□ 1.99
SSU72-201ENST00000291386 HMCESQ96FZ2 354 aa27.48■■□□□ 1.99
SSU72-201ENST00000291386 CEP44Q9C0F1 390 aa27.48■■□□□ 1.99
SSU72-201ENST00000291386 SLC39A8Q9C0K1 460 aa27.48■■□□□ 1.99
SSU72-201ENST00000291386 SEMA4AQ9H3S1 761 aa27.48■■□□□ 1.99
SSU72-201ENST00000291386 HYOU1Q9Y4L1 999 aa27.48■■□□□ 1.99
SSU72-201ENST00000291386 TMCO3Q6UWJ1 677 aa27.47■■□□□ 1.99
SSU72-201ENST00000291386 ZNF662Q6ZS27 426 aa27.47■■□□□ 1.99
SSU72-201ENST00000291386 TMPRSS6Q8IU80 811 aa27.47■■□□□ 1.99
SSU72-201ENST00000291386 PGBD3Q8N328 593 aa27.47■■□□□ 1.99
SSU72-201ENST00000291386 ATP11CQ8NB49 1132 aa27.47■■□□□ 1.99
SSU72-201ENST00000291386 GAB3Q8WWW8 586 aa27.47■■□□□ 1.99
SSU72-201ENST00000291386 TPSD1Q9BZJ3 242 aa27.47■■□□□ 1.99
SSU72-201ENST00000291386 TSGA10Q9BZW7 698 aa27.47■■□□□ 1.99
SSU72-201ENST00000291386 RSPH9Q9H1X1 276 aaPredicted RBP27.47■■□□□ 1.99
SSU72-201ENST00000291386 GOLPH3Q9H4A6 298 aa27.47■■□□□ 1.99
SSU72-201ENST00000291386 MTG2Q9H4K7 406 aa27.47■■□□□ 1.99
SSU72-201ENST00000291386 PRDM16Q9HAZ2 1276 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms