RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 LEXMQ3ZCV2 418 aa8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 HABP4Q5JVS0 413 aaKnown RBP8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 RAP1GAP2Q684P5 730 aa8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 CPLX4Q7Z7G2 160 aa8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 FGF13Q92913 245 aa8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 ARFGAP3Q9NP61 516 aa8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 RBM12Q9NTZ6 932 aaKnown RBP8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 TUBBP07437 444 aa8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 ERCC2P18074 760 aa8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 EPHB2P29323 1055 aa8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 VASPP50552 380 aaPredicted RBP8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 NTHL1P78549 312 aa8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 ZXDBP98169 803 aa8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 PPIDQ08752 370 aaKnown RBP8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 BYSLQ13895 437 aaKnown RBP8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 FAM78AQ5JUQ0 283 aa8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 THEMIS2Q5TEJ8 643 aa8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 TIGD7Q6NT04 549 aaPredicted RBP8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 RAPH1Q70E73 1250 aa8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 ZDHHC14Q8IZN3 488 aa8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 ATL2Q8NHH9 583 aa8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 NXPE3Q969Y0 559 aa8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 CYP2S1Q96SQ9 504 aa8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 HERPUD2Q9BSE4 406 aa8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 SLC2A11Q9BYW1 496 aa8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 UBE2ZQ9H832 354 aaPredicted RBP8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 NUMA1Q14980 2115 aa8.63□□□□□ -1.03
PTPDC1-201ENST00000288976 ZWINTO95229 277 aa8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 CYBBP04839 570 aa8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 ST8SIA6P61647 398 aa8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 SARNPP82979 210 aaKnown RBP8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 OTUD4Q01804 1114 aaKnown RBP8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 SNX1Q13596 522 aa8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 SLC45A4Q5BKX6 768 aa8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 GET4Q7L5D6 327 aaPredicted RBP8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 LGI2Q8N0V4 545 aa8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 ALLCQ8N6M5 410 aa8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 ZNF513Q8N8E2 541 aaPredicted RBP8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 MGARPQ8TDB4 240 aa8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 LRCH3Q96II8 777 aa8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 ZNF599Q96NL3 588 aa8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 PPP1R2P1Q96PQ5 205 aa8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 CARD6Q9BX69 1037 aa8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 MAGEH1Q9H213 219 aa8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 DPH5Q9H2P9 285 aa8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 FAM50BQ9Y247 325 aa8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 MUC22E2RYF6 1773 aaPredicted RBP8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 NBASA2RRP1 2371 aa8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 MKI67P46013 3256 aaKnown RBP8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 ILVBLA1L0T0 632 aa8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 MFSD11O43934 449 aa8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 STIP1P31948 543 aaKnown RBP8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 PTK6Q13882 451 aa8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 DMC1Q14565 340 aa8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 C14orf80Q86SX3 495 aa8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 EIF1ADQ8N9N8 165 aaKnown RBP8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 IGSF8Q969P0 613 aa8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 ZSWIM3Q96MP5 696 aa8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 KRT12Q99456 494 aa8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 GKN1Q9NS71 199 aa8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 AMACRQ9UHK6 382 aa8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 XPO7Q9UIA9 1087 aaKnown RBP8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 USP15Q9Y4E8 981 aaPredicted RBP8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 ARHGAP42A6NI28 874 aa8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 HOXC11O43248 304 aaPredicted RBP8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 AMPD1P23109 780 aa8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 CCNCP24863 283 aa8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 SATB1Q01826 763 aa8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 P3H1Q32P28 736 aa8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 METTL3Q86U44 580 aaKnown RBP8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 BPIFB1Q8TDL5 484 aa8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 ATP2A3Q93084 1043 aa8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 VAT1Q99536 393 aa8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 HEMGNQ9BXL5 484 aa8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 DTLQ9NZJ0 730 aa8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 VANGL2Q9ULK5 521 aa8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 NEU2Q9Y3R4 380 aa8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 F5P12259 2224 aa8.62□□□□□ -1.03
PTPDC1-201ENST00000288976 TCRBV7S2A1N4TA0A589 114 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 CTIFO43310 598 aaKnown RBP8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 LUC7L3O95232 432 aaKnown RBP8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 PRAMEF12O95522 483 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 NFATC1O95644 943 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 PTGIRP43119 386 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 ARL4DP49703 201 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 PLK1P53350 603 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 IFI35P80217 286 aaPredicted RBP8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 C2orf54Q08AI8 447 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 SLC14A2Q15849 920 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 ARID3BQ8IVW6 561 aaPredicted RBP8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 MFSD6LQ8IWD5 586 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 WDR48Q8TAF3 677 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 SEC14L1Q92503 715 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 WBP2Q969T9 261 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 SH3KBP1Q96B97 665 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 RPRD1AQ96P16 312 aaPredicted RBP8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 TRPV5Q9NQA5 729 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 HPCAL4Q9UM19 191 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms