RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 PNPLA4P41247 253 aa12.77□□□□□ -0.37
SLC6A1-201ENST00000287766 USP46P62068 366 aa12.77□□□□□ -0.37
SLC6A1-201ENST00000287766 KHDC1Q4VXA5 237 aaKnown RBP12.77□□□□□ -0.37
SLC6A1-201ENST00000287766 VWA5B1Q5TIE3 1220 aa12.77□□□□□ -0.37
SLC6A1-201ENST00000287766 LBX2Q6XYB7 198 aa12.77□□□□□ -0.37
SLC6A1-201ENST00000287766 RIPOR1Q6ZS17 1223 aa12.77□□□□□ -0.37
SLC6A1-201ENST00000287766 SLC44A1Q8WWI5 657 aa12.77□□□□□ -0.37
SLC6A1-201ENST00000287766 ERLEC1Q96DZ1 483 aa12.77□□□□□ -0.37
SLC6A1-201ENST00000287766 GAD1Q99259 594 aa12.77□□□□□ -0.37
SLC6A1-201ENST00000287766 ADARB2Q9NS39 739 aaKnown RBP12.77□□□□□ -0.37
SLC6A1-201ENST00000287766 SELENONQ9NZV5 590 aa12.77□□□□□ -0.37
SLC6A1-201ENST00000287766 ITGB1BP2Q9UKP3 347 aa12.77□□□□□ -0.37
SLC6A1-201ENST00000287766 PCDHGB4Q9UN71 923 aa12.77□□□□□ -0.37
SLC6A1-201ENST00000287766 ACOT9Q9Y305 439 aa12.77□□□□□ -0.37
SLC6A1-201ENST00000287766 COPG1Q9Y678 874 aaKnown RBP12.77□□□□□ -0.37
SLC6A1-201ENST00000287766 SNCAIPQ9Y6H5 919 aa12.77□□□□□ -0.37
SLC6A1-201ENST00000287766 PDHXO00330 501 aa12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 CHRNB3Q05901 458 aa12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 PTP4A2Q12974 167 aa12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 SYT15Q9BQS2 421 aa12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 NAT9Q9BTE0 207 aa12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 RBM22Q9NW64 420 aaKnown RBP eCLIP12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 A0A087WXM4 84 aa12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 A0A0A0MRY4 1105 aa12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 PRPF4O43172 522 aaKnown RBP eCLIP12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 MSCO60682 206 aa12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 CCR3P51677 355 aa12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 CROCCP3Q8IVE0 287 aa12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 GSTCDQ8NEC7 633 aa12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 SHCBP1Q8NEM2 672 aa12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 SEC14L1Q92503 715 aa12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 SPATA13Q96N96 652 aa12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 CACNA2D2Q9NY47 1150 aa12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 KCNK4Q9NYG8 393 aa12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 FAM32AQ9Y421 112 aaKnown RBP12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 NCF1BA6NI72 391 aaPredicted RBP12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 NCF1CA8MVU1 366 aaPredicted RBP12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 GSC2O15499 205 aa12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 BUD23O43709 281 aaKnown RBP12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 B4GALT4O60513 344 aa12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 TRIM13O60858 407 aa12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 ARIH2O95376 493 aa12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 GSNP06396 782 aa12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 PYGLP06737 847 aa12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 NCF1P14598 390 aaPredicted RBP12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 XPAP23025 273 aaPredicted RBP12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 OR1G1P47890 313 aa12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 DGCR6Q14129 220 aa12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 FAM83EQ2M2I3 478 aa12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 C10orf107Q8IVU9 208 aa12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 TSPAN14Q8NG11 270 aa12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 DPEP3Q9H4B8 488 aa12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 IMPAD1Q9NX62 359 aa12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 AK5Q9Y6K8 562 aa12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 TIMM44O43615 452 aa12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 ENDOD1O94919 500 aa12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 SP100P23497 879 aaPredicted RBP12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 KLRC2P26717 231 aa12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 NR1D2Q14995 579 aa12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 SGO1Q5FBB7 561 aa12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 ADGRD1Q6QNK2 874 aa12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 RNF19BQ6ZMZ0 732 aa12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 SYTL1Q8IYJ3 562 aa12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 SEPT5Q99719 369 aaPredicted RBP12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 C17orf80Q9BSJ5 609 aa12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 NIFKQ9BYG3 293 aaKnown RBP12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 SPATA2Q9UM82 520 aa12.76□□□□□ -0.37
SLC6A1-201ENST00000287766 CNTNAP2Q9UHC6 1331 aa12.75□□□□□ -0.37
SLC6A1-201ENST00000287766 TRDMT1O14717 391 aaKnown RBP12.75□□□□□ -0.37
SLC6A1-201ENST00000287766 INPP4BO15327 924 aa12.75□□□□□ -0.37
SLC6A1-201ENST00000287766 ANPEPP15144 967 aa12.75□□□□□ -0.37
SLC6A1-201ENST00000287766 PGAM1P18669 254 aa12.75□□□□□ -0.37
SLC6A1-201ENST00000287766 TSPAN8P19075 237 aa12.75□□□□□ -0.37
SLC6A1-201ENST00000287766 GPX6P59796 221 aa12.75□□□□□ -0.37
SLC6A1-201ENST00000287766 PLEKHG4BQ96PX9 1271 aa12.75□□□□□ -0.37
SLC6A1-201ENST00000287766 TKTL2Q9H0I9 626 aa12.75□□□□□ -0.37
SLC6A1-201ENST00000287766 NDFIP2Q9NV92 336 aa12.75□□□□□ -0.37
SLC6A1-201ENST00000287766 SH3GLB1Q9Y371 365 aa12.75□□□□□ -0.37
SLC6A1-201ENST00000287766 HCRTO43612 131 aa12.75□□□□□ -0.37
SLC6A1-201ENST00000287766 PIGNO95427 931 aa12.75□□□□□ -0.37
SLC6A1-201ENST00000287766 TOP3BO95985 862 aaKnown RBP12.75□□□□□ -0.37
SLC6A1-201ENST00000287766 HOXC6P09630 235 aa12.75□□□□□ -0.37
SLC6A1-201ENST00000287766 ME2P23368 584 aa12.75□□□□□ -0.37
SLC6A1-201ENST00000287766 BDNFP23560 247 aa12.75□□□□□ -0.37
SLC6A1-201ENST00000287766 THPOP40225 353 aa12.75□□□□□ -0.37
SLC6A1-201ENST00000287766 ASPAP45381 313 aa12.75□□□□□ -0.37
SLC6A1-201ENST00000287766 TMEM63BQ5T3F8 832 aa12.75□□□□□ -0.37
SLC6A1-201ENST00000287766 C9orf131Q5VYM1 1079 aa12.75□□□□□ -0.37
SLC6A1-201ENST00000287766 LUZP2Q86TE4 346 aa12.75□□□□□ -0.37
SLC6A1-201ENST00000287766 P2RY11Q96G91 374 aa12.75□□□□□ -0.37
SLC6A1-201ENST00000287766 LHX5Q9H2C1 402 aa12.75□□□□□ -0.37
SLC6A1-201ENST00000287766 NT5MQ9NPB1 228 aa12.75□□□□□ -0.37
SLC6A1-201ENST00000287766 PHLPP1O60346 1717 aa12.75□□□□□ -0.37
SLC6A1-201ENST00000287766 PCP4L1A6NKN8 68 aa12.75□□□□□ -0.37
SLC6A1-201ENST00000287766 CDH3P22223 829 aa12.75□□□□□ -0.37
SLC6A1-201ENST00000287766 IL5RAQ01344 420 aa12.75□□□□□ -0.37
SLC6A1-201ENST00000287766 CBX3Q13185 183 aa12.75□□□□□ -0.37
SLC6A1-201ENST00000287766 SIX1Q15475 284 aaPredicted RBP12.75□□□□□ -0.37
SLC6A1-201ENST00000287766 SLC10A6Q3KNW5 377 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms