RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 SNTG2Q9NY99 539 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 ZNF214Q9UL59 606 aaPredicted RBP13.64□□□□□ -0.23
SCAF4-201ENST00000286835 CNTN6Q9UQ52 1028 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 TDRKHQ9Y2W6 561 aaKnown RBP13.64□□□□□ -0.23
SCAF4-201ENST00000286835 ABCA3Q99758 1704 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 GLTPD2A6NH11 291 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 HUS1O60921 280 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 CYP2C9P11712 490 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 INSRRP14616 1297 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 RABGGTBP53611 331 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 SLC10A2Q12908 348 aaPredicted RBP13.64□□□□□ -0.23
SCAF4-201ENST00000286835 ACBD5Q5T8D3 534 aaPredicted RBP13.64□□□□□ -0.23
SCAF4-201ENST00000286835 LRRC8BQ6P9F7 803 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 DDIASQ8IXT1 998 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 ACMSDQ8TDX5 336 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 CHRAC1Q9NRG0 131 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 C6orf203Q9P0P8 240 aaPredicted RBP13.64□□□□□ -0.23
SCAF4-201ENST00000286835 B4GALT4O60513 344 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 VAPBO95292 243 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 SPATA31D3P0C874 917 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 SETSIPP0DME0 302 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 MYL4P12829 197 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 AKAP5P24588 427 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 CTBP1Q13363 440 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 LAMC2Q13753 1193 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 SPATA31D4Q6ZUB0 917 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 SLC41A1Q8IVJ1 513 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 UBR7Q8N806 425 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 DNERQ8NFT8 737 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 DDI1Q8WTU0 396 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 RNF139Q8WU17 664 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 VPS39Q96JC1 886 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 ZFRQ96KR1 1074 aaKnown RBP13.64□□□□□ -0.23
SCAF4-201ENST00000286835 RTKNQ9BST9 563 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 ADAMTSL1Q8N6G6 1762 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 ZNF839A8K0R7 811 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 STBD1O95210 358 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 DCTN2Q13561 401 aaKnown RBP13.64□□□□□ -0.23
SCAF4-201ENST00000286835 MTX3Q5HYI7 312 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 ITPRIPL1Q6GPH6 555 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 ARMCX2Q7L311 632 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 C1orf21Q9H246 121 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 TMEM165Q9HC07 324 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 DNAJB4Q9UDY4 337 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 ATP5BP06576 529 aaKnown RBP13.63□□□□□ -0.23
SCAF4-201ENST00000286835 TFEBP19484 476 aa13.63□□□□□ -0.23
SCAF4-201ENST00000286835 ARHGEF6Q15052 776 aa13.63□□□□□ -0.23
SCAF4-201ENST00000286835 DRAXINQ8NBI3 349 aaPredicted RBP13.63□□□□□ -0.23
SCAF4-201ENST00000286835 MTMR14Q8NCE2 650 aa13.63□□□□□ -0.23
SCAF4-201ENST00000286835 DNAJC28Q9NX36 388 aa13.63□□□□□ -0.23
SCAF4-201ENST00000286835 ACOT9Q9Y305 439 aa13.63□□□□□ -0.23
SCAF4-201ENST00000286835 AP4S1Q9Y587 144 aa13.63□□□□□ -0.23
SCAF4-201ENST00000286835 TMEM233B4DJY2 109 aa13.63□□□□□ -0.23
SCAF4-201ENST00000286835 TIMM44O43615 452 aa13.63□□□□□ -0.23
SCAF4-201ENST00000286835 CCNT2O60583 730 aaKnown RBP13.63□□□□□ -0.23
SCAF4-201ENST00000286835 MOCS2O96007 188 aaPredicted RBP13.63□□□□□ -0.23
SCAF4-201ENST00000286835 PIGRP01833 764 aa13.63□□□□□ -0.23
SCAF4-201ENST00000286835 NCAM1P13591 858 aa13.63□□□□□ -0.23
SCAF4-201ENST00000286835 OAZ1P54368 228 aa13.63□□□□□ -0.23
SCAF4-201ENST00000286835 MAP3K10Q02779 954 aa13.63□□□□□ -0.23
SCAF4-201ENST00000286835 PITRM1Q5JRX3 1037 aa13.63□□□□□ -0.23
SCAF4-201ENST00000286835 MAPK15Q8TD08 544 aa13.63□□□□□ -0.23
SCAF4-201ENST00000286835 PBXIP1Q96AQ6 731 aa13.63□□□□□ -0.23
SCAF4-201ENST00000286835 RMND5BQ96G75 393 aaPredicted RBP13.63□□□□□ -0.23
SCAF4-201ENST00000286835 PKP2Q99959 881 aa13.63□□□□□ -0.23
SCAF4-201ENST00000286835 DDIT4Q9NX09 232 aa13.63□□□□□ -0.23
SCAF4-201ENST00000286835 WARS2Q9UGM6 360 aaKnown RBP13.63□□□□□ -0.23
SCAF4-201ENST00000286835 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.63□□□□□ -0.23
SCAF4-201ENST00000286835 C9JVG2 144 aa13.63□□□□□ -0.23
SCAF4-201ENST00000286835 SNNO75324 88 aaPredicted RBP13.63□□□□□ -0.23
SCAF4-201ENST00000286835 ADCYAP1R1P41586 468 aa13.63□□□□□ -0.23
SCAF4-201ENST00000286835 NR2C2P49116 596 aa13.63□□□□□ -0.23
SCAF4-201ENST00000286835 CDH15P55291 814 aa13.63□□□□□ -0.23
SCAF4-201ENST00000286835 PRKAA1Q13131 559 aa13.63□□□□□ -0.23
SCAF4-201ENST00000286835 HSF5Q4G112 596 aaPredicted RBP13.63□□□□□ -0.23
SCAF4-201ENST00000286835 FBXL19Q6PCT2 694 aa13.63□□□□□ -0.23
SCAF4-201ENST00000286835 SETD3Q86TU7 594 aaPredicted RBP13.63□□□□□ -0.23
SCAF4-201ENST00000286835 DPEP3Q9H4B8 488 aa13.63□□□□□ -0.23
SCAF4-201ENST00000286835 XPR1Q9UBH6 696 aa13.63□□□□□ -0.23
SCAF4-201ENST00000286835 STK39Q9UEW8 545 aa13.63□□□□□ -0.23
SCAF4-201ENST00000286835 TCRBV5S1A1TA0A578 114 aa13.62□□□□□ -0.23
SCAF4-201ENST00000286835 KCNU1A8MYU2 1149 aa13.62□□□□□ -0.23
SCAF4-201ENST00000286835 H3BRB1 525 aa13.62□□□□□ -0.23
SCAF4-201ENST00000286835 PPARGP37231 505 aaPredicted RBP13.62□□□□□ -0.23
SCAF4-201ENST00000286835 MSLNQ13421 630 aaPredicted RBP13.62□□□□□ -0.23
SCAF4-201ENST00000286835 GRAMD4Q6IC98 578 aa13.62□□□□□ -0.23
SCAF4-201ENST00000286835 EDEM1Q92611 657 aa13.62□□□□□ -0.23
SCAF4-201ENST00000286835 PAIP1Q9H074 479 aaKnown RBP13.62□□□□□ -0.23
SCAF4-201ENST00000286835 TUT1Q9H6E5 874 aaKnown RBP13.62□□□□□ -0.23
SCAF4-201ENST00000286835 NOL11Q9H8H0 719 aaKnown RBP13.62□□□□□ -0.23
SCAF4-201ENST00000286835 PNPLA8Q9NP80 782 aa13.62□□□□□ -0.23
SCAF4-201ENST00000286835 TSR3Q9UJK0 312 aaKnown RBP13.62□□□□□ -0.23
SCAF4-201ENST00000286835 DDHD2O94830 711 aa13.62□□□□□ -0.23
SCAF4-201ENST00000286835 SUPT7LO94864 414 aa13.62□□□□□ -0.23
SCAF4-201ENST00000286835 PABPC4LP0CB38 370 aaKnown RBP13.62□□□□□ -0.23
SCAF4-201ENST00000286835 TPSB2P20231 275 aa13.62□□□□□ -0.23
SCAF4-201ENST00000286835 CDH5P33151 784 aaPredicted RBP13.62□□□□□ -0.23
SCAF4-201ENST00000286835 LSAMPQ13449 338 aa13.62□□□□□ -0.23
SCAF4-201ENST00000286835 TPSAB1Q15661 275 aa13.62□□□□□ -0.23
SCAF4-201ENST00000286835 PRAMEF19Q5SWL8 479 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms