RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 THAP1Q9NVV9 213 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 DNMT3LQ9UJW3 386 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 KCNE2Q9Y6J6 123 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 SLC28A1O00337 649 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 SNPHO15079 494 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 IFNGP01579 166 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 FGF1P05230 155 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 MYBP10242 640 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 LAG3P18627 525 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 AIF1P55008 147 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 AP1S2P56377 157 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 FKBP1AP62942 108 aaKnown RBP4.13□□□□□ -1.75
SCN3A-201ENST00000283254 E2F4Q16254 413 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 SPANXN3Q5MJ09 141 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 AFTPHQ6ULP2 937 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 ATCAYQ86WG3 371 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 KCNV2Q8TDN2 545 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 METTL21AQ8WXB1 218 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 ZKSCAN4Q969J2 545 aaPredicted RBP4.13□□□□□ -1.75
SCN3A-201ENST00000283254 APOPT1Q96IL0 206 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 C9orf16Q9BUW7 83 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 IL22Q9GZX6 179 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 POLD4Q9HCU8 107 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 DDX43Q9NXZ2 648 aaKnown RBP4.13□□□□□ -1.75
SCN3A-201ENST00000283254 HCN3Q9P1Z3 774 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 HMGXB4Q9UGU5 601 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 ADAM28Q9UKQ2 775 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 ZNF214Q9UL59 606 aaPredicted RBP4.13□□□□□ -1.75
SCN3A-201ENST00000283254 CDC42BPBQ9Y5S2 1711 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 SALL1Q9NSC2 1324 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 KIAA0100Q14667 2235 aaKnown RBP4.13□□□□□ -1.75
SCN3A-201ENST00000283254 ULK1O75385 1050 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 EIF4BP23588 611 aaKnown RBP4.13□□□□□ -1.75
SCN3A-201ENST00000283254 CTNNB1P35222 781 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 PSEN2P49810 448 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 NDUFV1P49821 464 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 CHN2P52757 468 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 PTSQ03393 145 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 DMPKQ09013 629 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 NDUFA9Q16795 377 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 LAYNQ6UX15 382 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 LPCAT2Q7L5N7 544 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 DEPDC4Q8N2C3 294 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 UBA3Q8TBC4 463 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 RORBQ92753 470 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 ZNF607Q96SK3 696 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 LRRC1Q9BTT6 524 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 CPA4Q9UI42 421 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 VSTM5A8MXK1 200 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 F8VZ95 297 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 DGKIO75912 1065 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 CPSF4O95639 269 aaKnown RBP4.13□□□□□ -1.75
SCN3A-201ENST00000283254 NFATC1O95644 943 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 RPA3P35244 121 aaPredicted RBP4.13□□□□□ -1.75
SCN3A-201ENST00000283254 IGFALSP35858 605 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 HK2P52789 917 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 AQP5P55064 265 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 CSHL1Q14406 222 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 ITIH4Q14624 930 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 FGD3Q5JSP0 725 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 KIAA1324Q6UXG2 1013 aaKnown RBP4.13□□□□□ -1.75
SCN3A-201ENST00000283254 SPOCD1Q6ZMY3 1216 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 SYT12Q8IV01 421 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 MARCH10Q8NA82 808 aaPredicted RBP4.13□□□□□ -1.75
SCN3A-201ENST00000283254 SYTL5Q8TDW5 730 aaPredicted RBP4.13□□□□□ -1.75
SCN3A-201ENST00000283254 WNT8BQ93098 351 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 TAAR1Q96RJ0 339 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 SH2D3AQ9BRG2 576 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 GPRC5DQ9NZD1 345 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 TSPAN16Q9UKR8 245 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 GSTK1Q9Y2Q3 226 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 NDUFAF1Q9Y375 327 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 SETBP1Q9Y6X0 1596 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 A0A087WWV3 80 aa4.12□□□□□ -1.75
SCN3A-201ENST00000283254 A0A087X1B8 175 aa4.12□□□□□ -1.75
SCN3A-201ENST00000283254 H0YJX3 145 aa4.12□□□□□ -1.75
SCN3A-201ENST00000283254 AP3D1O14617 1153 aa4.12□□□□□ -1.75
SCN3A-201ENST00000283254 CA12O43570 354 aa4.12□□□□□ -1.75
SCN3A-201ENST00000283254 RPL22P35268 128 aaKnown RBP4.12□□□□□ -1.75
SCN3A-201ENST00000283254 ARFIP1P53367 373 aa4.12□□□□□ -1.75
SCN3A-201ENST00000283254 RAB2AP61019 212 aa4.12□□□□□ -1.75
SCN3A-201ENST00000283254 BTKQ06187 659 aa4.12□□□□□ -1.75
SCN3A-201ENST00000283254 ILF3Q12906 894 aaKnown RBP eCLIP4.12□□□□□ -1.75
SCN3A-201ENST00000283254 RALGDSQ12967 914 aa4.12□□□□□ -1.75
SCN3A-201ENST00000283254 PPIGQ13427 754 aaKnown RBP eCLIP4.12□□□□□ -1.75
SCN3A-201ENST00000283254 AP5B1Q2VPB7 878 aa4.12□□□□□ -1.75
SCN3A-201ENST00000283254 ATXN7L2Q5T6C5 722 aaPredicted RBP4.12□□□□□ -1.75
SCN3A-201ENST00000283254 GRTP1Q5TC63 336 aa4.12□□□□□ -1.75
SCN3A-201ENST00000283254 LRRC38Q5VT99 294 aa4.12□□□□□ -1.75
SCN3A-201ENST00000283254 TTI2Q6NXR4 508 aa4.12□□□□□ -1.75
SCN3A-201ENST00000283254 DOK6Q6PKX4 331 aa4.12□□□□□ -1.75
SCN3A-201ENST00000283254 LRRC74BQ6ZQY2 392 aa4.12□□□□□ -1.75
SCN3A-201ENST00000283254 MILR1Q7Z6M3 343 aa4.12□□□□□ -1.75
SCN3A-201ENST00000283254 SCUBE1Q8IWY4 988 aa4.12□□□□□ -1.75
SCN3A-201ENST00000283254 IZUMO1Q8IYV9 350 aa4.12□□□□□ -1.75
SCN3A-201ENST00000283254 SAMD14Q8IZD0 417 aaPredicted RBP4.12□□□□□ -1.75
SCN3A-201ENST00000283254 CPA6Q8N4T0 437 aa4.12□□□□□ -1.75
SCN3A-201ENST00000283254 TPCN2Q8NHX9 752 aa4.12□□□□□ -1.75
SCN3A-201ENST00000283254 IGDCC4Q8TDY8 1250 aa4.12□□□□□ -1.75
SCN3A-201ENST00000283254 MYDGFQ969H8 173 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms