RNA–Protein interactions for RNA: ENST00000276241.10

CT55-201, Transcript of cancer/testis antigen 55, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CT55, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT55-201ENST00000276241 IL31Q6EBC2 164 aa13.94□□□□□ -0.18
CT55-201ENST00000276241 NLRP14Q86W24 1093 aa13.94□□□□□ -0.18
CT55-201ENST00000276241 ZNF354CQ86Y25 554 aa13.94□□□□□ -0.18
CT55-201ENST00000276241 FRS2Q8WU20 508 aa13.94□□□□□ -0.18
CT55-201ENST00000276241 FOXJ1Q92949 421 aa13.94□□□□□ -0.18
CT55-201ENST00000276241 NUSAP1Q9BXS6 441 aaKnown RBP13.94□□□□□ -0.18
CT55-201ENST00000276241 BTBD1Q9H0C5 482 aa13.94□□□□□ -0.18
CT55-201ENST00000276241 THAP2Q9H0W7 228 aa13.94□□□□□ -0.18
CT55-201ENST00000276241 ISCUQ9H1K1 167 aa13.94□□□□□ -0.18
CT55-201ENST00000276241 MIR1-1HGQ9H1L0 117 aa13.94□□□□□ -0.18
CT55-201ENST00000276241 ARHGAP20Q9P2F6 1191 aa13.94□□□□□ -0.18
CT55-201ENST00000276241 SERGEFQ9UGK8 458 aa13.94□□□□□ -0.18
CT55-201ENST00000276241 PCSK1NQ9UHG2 260 aa13.94□□□□□ -0.18
CT55-201ENST00000276241 AP4E1Q9UPM8 1137 aa13.94□□□□□ -0.18
CT55-201ENST00000276241 NCKAP1Q9Y2A7 1128 aa13.94□□□□□ -0.18
CT55-201ENST00000276241 OTOGLQ3ZCN5 2332 aa13.94□□□□□ -0.18
CT55-201ENST00000276241 GPR179Q6PRD1 2367 aa13.94□□□□□ -0.18
CT55-201ENST00000276241 A0A087X0T9 212 aa13.93□□□□□ -0.18
CT55-201ENST00000276241 TMEM191CA6NGB0 347 aa13.93□□□□□ -0.18
CT55-201ENST00000276241 FAM47DPA6NHR8 397 aa13.93□□□□□ -0.18
CT55-201ENST00000276241 ATP9BO43861 1147 aa13.93□□□□□ -0.18
CT55-201ENST00000276241 RNASEH2AO75792 299 aaKnown RBP13.93□□□□□ -0.18
CT55-201ENST00000276241 SEMA4FO95754 770 aa13.93□□□□□ -0.18
CT55-201ENST00000276241 MT-CO1P00395 513 aa13.93□□□□□ -0.18
CT55-201ENST00000276241 FAM228BP0C875 321 aa13.93□□□□□ -0.18
CT55-201ENST00000276241 EPHB2P29323 1055 aa13.93□□□□□ -0.18
CT55-201ENST00000276241 ACVRL1P37023 503 aa13.93□□□□□ -0.18
CT55-201ENST00000276241 DPP6P42658 865 aa13.93□□□□□ -0.18
CT55-201ENST00000276241 MAPKAPK2P49137 400 aa13.93□□□□□ -0.18
CT55-201ENST00000276241 AIF1P55008 147 aa13.93□□□□□ -0.18
CT55-201ENST00000276241 PUM1Q14671 1186 aaKnown RBP eCLIP13.93□□□□□ -0.18
CT55-201ENST00000276241 POM121L1PQ3SYA9 428 aa13.93□□□□□ -0.18
CT55-201ENST00000276241 WDR45BQ5MNZ6 344 aa13.93□□□□□ -0.18
CT55-201ENST00000276241 DAB2IPQ5VWQ8 1189 aa13.93□□□□□ -0.18
CT55-201ENST00000276241 ZNF783Q6ZMS7 281 aa13.93□□□□□ -0.18
CT55-201ENST00000276241 VSTM4Q8IW00 320 aa13.93□□□□□ -0.18
CT55-201ENST00000276241 OR8D1Q8WZ84 308 aa13.93□□□□□ -0.18
CT55-201ENST00000276241 ZNF419Q96HQ0 510 aaPredicted RBP13.93□□□□□ -0.18
CT55-201ENST00000276241 FAM129BQ96TA1 746 aa13.93□□□□□ -0.18
CT55-201ENST00000276241 EPAS1Q99814 870 aa13.93□□□□□ -0.18
CT55-201ENST00000276241 OMDQ99983 421 aa13.93□□□□□ -0.18
CT55-201ENST00000276241 C6orf106Q9H6K1 298 aaPredicted RBP13.93□□□□□ -0.18
CT55-201ENST00000276241 MRPL47Q9HD33 250 aaKnown RBP13.93□□□□□ -0.18
CT55-201ENST00000276241 TMEM248Q9NWD8 314 aa13.93□□□□□ -0.18
CT55-201ENST00000276241 FBXL12Q9NXK8 326 aa13.93□□□□□ -0.18
CT55-201ENST00000276241 HS3ST2Q9Y278 367 aa13.93□□□□□ -0.18
CT55-201ENST00000276241 CFAP54Q96N23 3096 aa13.93□□□□□ -0.18
CT55-201ENST00000276241 PLK4O00444 970 aa13.92□□□□□ -0.18
CT55-201ENST00000276241 RAMP2O60895 175 aa13.92□□□□□ -0.18
CT55-201ENST00000276241 RNF8O76064 485 aa13.92□□□□□ -0.18
CT55-201ENST00000276241 ADH1BP00325 375 aa13.92□□□□□ -0.18
CT55-201ENST00000276241 SDHBP21912 280 aa13.92□□□□□ -0.18
CT55-201ENST00000276241 KCNA4P22459 653 aa13.92□□□□□ -0.18
CT55-201ENST00000276241 L1CAMP32004 1257 aa13.92□□□□□ -0.18
CT55-201ENST00000276241 SLC8A1P32418 973 aa13.92□□□□□ -0.18
CT55-201ENST00000276241 MAPK8P45983 427 aa13.92□□□□□ -0.18
CT55-201ENST00000276241 METAP1P53582 386 aa13.92□□□□□ -0.18
CT55-201ENST00000276241 TPI1P60174 286 aa13.92□□□□□ -0.18
CT55-201ENST00000276241 IRX4P78413 519 aa13.92□□□□□ -0.18
CT55-201ENST00000276241 CCDC122Q5T0U0 273 aa13.92□□□□□ -0.18
CT55-201ENST00000276241 PEAR1Q5VY43 1037 aaPredicted RBP13.92□□□□□ -0.18
CT55-201ENST00000276241 C22orf39Q6P5X5 142 aa13.92□□□□□ -0.18
CT55-201ENST00000276241 ALKBH5Q6P6C2 394 aaKnown RBP13.92□□□□□ -0.18
CT55-201ENST00000276241 DGLUCYQ7Z3D6 616 aa13.92□□□□□ -0.18
CT55-201ENST00000276241 DSG4Q86SJ6 1040 aa13.92□□□□□ -0.18
CT55-201ENST00000276241 ZCCHC9Q8N567 271 aaKnown RBP13.92□□□□□ -0.18
CT55-201ENST00000276241 AADATQ8N5Z0 425 aa13.92□□□□□ -0.18
CT55-201ENST00000276241 PEBP4Q96S96 227 aa13.92□□□□□ -0.18
CT55-201ENST00000276241 SNRNP25Q9BV90 132 aaKnown RBP13.92□□□□□ -0.18
CT55-201ENST00000276241 TNKS2Q9H2K2 1166 aa13.92□□□□□ -0.18
CT55-201ENST00000276241 DEF6Q9H4E7 631 aa13.92□□□□□ -0.18
CT55-201ENST00000276241 DHX35Q9H5Z1 703 aaKnown RBP13.92□□□□□ -0.18
CT55-201ENST00000276241 DLL3Q9NYJ7 618 aa13.92□□□□□ -0.18
CT55-201ENST00000276241 SCML1Q9UN30 329 aa13.92□□□□□ -0.18
CT55-201ENST00000276241 ACTL7AQ9Y615 435 aa13.92□□□□□ -0.18
CT55-201ENST00000276241 SPAG17Q6Q759 2223 aa13.92□□□□□ -0.18
CT55-201ENST00000276241 C1QTNF3-AMACRE9PGA6 284 aa13.91□□□□□ -0.18
CT55-201ENST00000276241 SMAD6O43541 496 aaKnown RBP13.91□□□□□ -0.18
CT55-201ENST00000276241 PRPSAP2O60256 369 aa13.91□□□□□ -0.18
CT55-201ENST00000276241 MFAP3LO75121 409 aa13.91□□□□□ -0.18
CT55-201ENST00000276241 FSBPO95073 299 aa13.91□□□□□ -0.18
CT55-201ENST00000276241 ENGP17813 658 aa13.91□□□□□ -0.18
CT55-201ENST00000276241 HOXD12P35452 270 aa13.91□□□□□ -0.18
CT55-201ENST00000276241 ETFBP38117 255 aa13.91□□□□□ -0.18
CT55-201ENST00000276241 EIF4A3P38919 411 aaKnown RBP13.91□□□□□ -0.18
CT55-201ENST00000276241 SERPINH1P50454 418 aaKnown RBP13.91□□□□□ -0.18
CT55-201ENST00000276241 ARF5P84085 180 aa13.91□□□□□ -0.18
CT55-201ENST00000276241 GFPT1Q06210 699 aaPredicted RBP13.91□□□□□ -0.18
CT55-201ENST00000276241 CA9Q16790 459 aa13.91□□□□□ -0.18
CT55-201ENST00000276241 DUOXA1Q1HG43 343 aa13.91□□□□□ -0.18
CT55-201ENST00000276241 STPG1Q5TH74 334 aa13.91□□□□□ -0.18
CT55-201ENST00000276241 RETSATQ6NUM9 610 aa13.91□□□□□ -0.18
CT55-201ENST00000276241 LEKR1Q6ZMV7 388 aa13.91□□□□□ -0.18
CT55-201ENST00000276241 USP30Q70CQ3 517 aa13.91□□□□□ -0.18
CT55-201ENST00000276241 RABEPKQ7Z6M1 372 aa13.91□□□□□ -0.18
CT55-201ENST00000276241 HDDC3Q8N4P3 179 aa13.91□□□□□ -0.18
CT55-201ENST00000276241 ARFGAP1Q8N6T3 406 aa13.91□□□□□ -0.18
CT55-201ENST00000276241 RTL3Q8N8U3 475 aaKnown RBP13.91□□□□□ -0.18
CT55-201ENST00000276241 CADM4Q8NFZ8 388 aa13.91□□□□□ -0.18
CT55-201ENST00000276241 FNIP1Q8TF40 1166 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms