RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 ERBB2P04626 1255 aa9.22□□□□□ -0.93
TPM3-201ENST00000271850 PNMA6AP0CW24 399 aaPredicted RBP9.22□□□□□ -0.93
TPM3-201ENST00000271850 SLC9A1P19634 815 aa9.22□□□□□ -0.93
TPM3-201ENST00000271850 C5AR1P21730 350 aa9.22□□□□□ -0.93
TPM3-201ENST00000271850 CD38P28907 300 aa9.22□□□□□ -0.93
TPM3-201ENST00000271850 GNA15P30679 374 aa9.22□□□□□ -0.93
TPM3-201ENST00000271850 PLK1P53350 603 aa9.22□□□□□ -0.93
TPM3-201ENST00000271850 ST8SIA6P61647 398 aa9.22□□□□□ -0.93
TPM3-201ENST00000271850 YWHAZP63104 245 aaKnown RBP9.22□□□□□ -0.93
TPM3-201ENST00000271850 SUZ12Q15022 739 aaKnown RBP9.22□□□□□ -0.93
TPM3-201ENST00000271850 POM121L1PQ3SYA9 428 aa9.22□□□□□ -0.93
TPM3-201ENST00000271850 CCDC157Q569K6 752 aa9.22□□□□□ -0.93
TPM3-201ENST00000271850 FBXL19Q6PCT2 694 aa9.22□□□□□ -0.93
TPM3-201ENST00000271850 TRIM65Q6PJ69 517 aa9.22□□□□□ -0.93
TPM3-201ENST00000271850 FAM183BPQ6ZVS7 135 aa9.22□□□□□ -0.93
TPM3-201ENST00000271850 SND1Q7KZF4 910 aaKnown RBP eCLIP9.22□□□□□ -0.93
TPM3-201ENST00000271850 ADAT2Q7Z6V5 191 aaKnown RBP9.22□□□□□ -0.93
TPM3-201ENST00000271850 OR14C36Q8NHC7 312 aa9.22□□□□□ -0.93
TPM3-201ENST00000271850 GANCQ8TET4 914 aa9.22□□□□□ -0.93
TPM3-201ENST00000271850 VOPP1Q96AW1 172 aa9.22□□□□□ -0.93
TPM3-201ENST00000271850 LRIG1Q96JA1 1093 aa9.22□□□□□ -0.93
TPM3-201ENST00000271850 CNDP2Q96KP4 475 aaKnown RBP9.22□□□□□ -0.93
TPM3-201ENST00000271850 BTN2A3PQ96KV6 586 aa9.22□□□□□ -0.93
TPM3-201ENST00000271850 PSMB7Q99436 277 aa9.22□□□□□ -0.93
TPM3-201ENST00000271850 OMDQ99983 421 aa9.22□□□□□ -0.93
TPM3-201ENST00000271850 CRACR2AQ9BSW2 395 aa9.22□□□□□ -0.93
TPM3-201ENST00000271850 SRRTQ9BXP5 876 aaKnown RBP9.22□□□□□ -0.93
TPM3-201ENST00000271850 UBE2TQ9NPD8 197 aaPredicted RBP9.22□□□□□ -0.93
TPM3-201ENST00000271850 TMPRSS4Q9NRS4 437 aa9.22□□□□□ -0.93
TPM3-201ENST00000271850 FTSJ1Q9UET6 329 aa9.22□□□□□ -0.93
TPM3-201ENST00000271850 PPM1HQ9ULR3 514 aa9.22□□□□□ -0.93
TPM3-201ENST00000271850 NCKAP1Q9Y2A7 1128 aa9.22□□□□□ -0.93
TPM3-201ENST00000271850 HS3ST4Q9Y661 456 aa9.22□□□□□ -0.93
TPM3-201ENST00000271850 MYLKQ15746 1914 aa9.22□□□□□ -0.93
TPM3-201ENST00000271850 SYNJ2BP-COX16A0A087WUM0 186 aa9.21□□□□□ -0.94
TPM3-201ENST00000271850 LRRC72A6NJI9 287 aa9.21□□□□□ -0.94
TPM3-201ENST00000271850 F5H5T6 163 aa9.21□□□□□ -0.94
TPM3-201ENST00000271850 TLR4O00206 839 aa9.21□□□□□ -0.94
TPM3-201ENST00000271850 THAP12O43422 761 aa9.21□□□□□ -0.94
TPM3-201ENST00000271850 ATP9BO43861 1147 aa9.21□□□□□ -0.94
TPM3-201ENST00000271850 SNAP91O60641 907 aa9.21□□□□□ -0.94
TPM3-201ENST00000271850 CNTN5O94779 1100 aa9.21□□□□□ -0.94
TPM3-201ENST00000271850 IL1BP01584 269 aa9.21□□□□□ -0.94
TPM3-201ENST00000271850 APOEP02649 317 aa9.21□□□□□ -0.94
TPM3-201ENST00000271850 GIMD1P0DJR0 217 aa9.21□□□□□ -0.94
TPM3-201ENST00000271850 KRT5P13647 590 aa9.21□□□□□ -0.94
TPM3-201ENST00000271850 ITPKBP27987 946 aa9.21□□□□□ -0.94
TPM3-201ENST00000271850 MAT2AP31153 395 aaKnown RBP9.21□□□□□ -0.94
TPM3-201ENST00000271850 ACADSBP45954 432 aa9.21□□□□□ -0.94
TPM3-201ENST00000271850 RXRGP48443 463 aa9.21□□□□□ -0.94
TPM3-201ENST00000271850 C21orf59P57076 290 aa9.21□□□□□ -0.94
TPM3-201ENST00000271850 CNTN1Q12860 1018 aa9.21□□□□□ -0.94
TPM3-201ENST00000271850 PAK1Q13153 545 aa9.21□□□□□ -0.94
TPM3-201ENST00000271850 AUHQ13825 339 aaKnown RBP9.21□□□□□ -0.94
TPM3-201ENST00000271850 ELAVL3Q14576 367 aaKnown RBP9.21□□□□□ -0.94
TPM3-201ENST00000271850 C5orf22Q49AR2 442 aa9.21□□□□□ -0.94
TPM3-201ENST00000271850 PTPN20Q4JDL3 420 aa9.21□□□□□ -0.94
TPM3-201ENST00000271850 ALFQ53S48 1182 aa9.21□□□□□ -0.94
TPM3-201ENST00000271850 PIP5KL1Q5T9C9 394 aa9.21□□□□□ -0.94
TPM3-201ENST00000271850 TRNP1Q6NT89 227 aa9.21□□□□□ -0.94
TPM3-201ENST00000271850 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.21□□□□□ -0.94
TPM3-201ENST00000271850 Q6ZVU0 165 aa9.21□□□□□ -0.94
TPM3-201ENST00000271850 PASD1Q8IV76 773 aa9.21□□□□□ -0.94
TPM3-201ENST00000271850 GALNT15Q8N3T1 639 aa9.21□□□□□ -0.94
TPM3-201ENST00000271850 EID2Q8N6I1 236 aa9.21□□□□□ -0.94
TPM3-201ENST00000271850 ZNF557Q8N988 423 aaPredicted RBP9.21□□□□□ -0.94
TPM3-201ENST00000271850 TMEM145Q8NBT3 493 aa9.21□□□□□ -0.94
TPM3-201ENST00000271850 C1orf131Q8NDD1 294 aaKnown RBP9.21□□□□□ -0.94
TPM3-201ENST00000271850 SHC3Q92529 594 aa9.21□□□□□ -0.94
TPM3-201ENST00000271850 SERAC1Q96JX3 654 aa9.21□□□□□ -0.94
TPM3-201ENST00000271850 DDX50Q9BQ39 737 aaKnown RBP9.21□□□□□ -0.94
TPM3-201ENST00000271850 REPIN1Q9BWE0 567 aaKnown RBP9.21□□□□□ -0.94
TPM3-201ENST00000271850 GTPBP4Q9BZE4 634 aaKnown RBP9.21□□□□□ -0.94
TPM3-201ENST00000271850 THAP9Q9H5L6 903 aa9.21□□□□□ -0.94
TPM3-201ENST00000271850 AASDHPPTQ9NRN7 309 aa9.21□□□□□ -0.94
TPM3-201ENST00000271850 COX16Q9P0S2 106 aa9.21□□□□□ -0.94
TPM3-201ENST00000271850 ZNF212Q9UDV6 495 aa9.21□□□□□ -0.94
TPM3-201ENST00000271850 PCDHGA1Q9Y5H4 931 aa9.21□□□□□ -0.94
TPM3-201ENST00000271850 BSNQ9UPA5 3926 aa9.2□□□□□ -0.94
TPM3-201ENST00000271850 LY6G6EA0A0G2JKS1 128 aa9.2□□□□□ -0.94
TPM3-201ENST00000271850 A0A1B0GVM2 712 aa9.2□□□□□ -0.94
TPM3-201ENST00000271850 FAM170AA1A519 330 aa9.2□□□□□ -0.94
TPM3-201ENST00000271850 TYW5A2RUC4 315 aaKnown RBP9.2□□□□□ -0.94
TPM3-201ENST00000271850 TCAF2A6NFQ2 919 aa9.2□□□□□ -0.94
TPM3-201ENST00000271850 K7ERQ8 282 aa9.2□□□□□ -0.94
TPM3-201ENST00000271850 TRIM38O00635 465 aa9.2□□□□□ -0.94
TPM3-201ENST00000271850 CAPN9O14815 690 aa9.2□□□□□ -0.94
TPM3-201ENST00000271850 SART1O43290 800 aaKnown RBP9.2□□□□□ -0.94
TPM3-201ENST00000271850 SMAD6O43541 496 aaKnown RBP9.2□□□□□ -0.94
TPM3-201ENST00000271850 RNASEH1O60930 286 aaKnown RBP9.2□□□□□ -0.94
TPM3-201ENST00000271850 SDC3O75056 442 aa9.2□□□□□ -0.94
TPM3-201ENST00000271850 ZNF821O75541 412 aaPredicted RBP9.2□□□□□ -0.94
TPM3-201ENST00000271850 RFPL3O75679 317 aa9.2□□□□□ -0.94
TPM3-201ENST00000271850 C1QL1O75973 258 aa9.2□□□□□ -0.94
TPM3-201ENST00000271850 ADCY5O95622 1261 aa9.2□□□□□ -0.94
TPM3-201ENST00000271850 LDOC1O95751 146 aaPredicted RBP9.2□□□□□ -0.94
TPM3-201ENST00000271850 PRB1P04280 392 aa9.2□□□□□ -0.94
TPM3-201ENST00000271850 SRCP12931 536 aa9.2□□□□□ -0.94
TPM3-201ENST00000271850 GLDCP23378 1020 aa9.2□□□□□ -0.94
TPM3-201ENST00000271850 CLCN1P35523 988 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms