RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 HBS1LQ9Y450 684 aaKnown RBP15.63■□□□□ 0.09
SF3B4-201ENST00000271628 TM9SF1O15321 606 aa15.63■□□□□ 0.09
SF3B4-201ENST00000271628 ADAM12O43184 909 aa15.63■□□□□ 0.09
SF3B4-201ENST00000271628 ABLIM3O94929 683 aa15.63■□□□□ 0.09
SF3B4-201ENST00000271628 CSH1P0DML2 217 aa15.63■□□□□ 0.09
SF3B4-201ENST00000271628 CSH2P0DML3 217 aa15.63■□□□□ 0.09
SF3B4-201ENST00000271628 CNTFP26441 200 aa15.63■□□□□ 0.09
SF3B4-201ENST00000271628 RPA3P35244 121 aaPredicted RBP15.63■□□□□ 0.09
SF3B4-201ENST00000271628 ATP5C1P36542 298 aaKnown RBP15.63■□□□□ 0.09
SF3B4-201ENST00000271628 NPY2RP49146 381 aa15.63■□□□□ 0.09
SF3B4-201ENST00000271628 SERPINB9P50453 376 aa15.63■□□□□ 0.09
SF3B4-201ENST00000271628 DSG1Q02413 1049 aa15.63■□□□□ 0.09
SF3B4-201ENST00000271628 SF3A3Q12874 501 aaKnown RBP eCLIP15.63■□□□□ 0.09
SF3B4-201ENST00000271628 NAB1Q13506 487 aa15.63■□□□□ 0.09
SF3B4-201ENST00000271628 RNF43Q68DV7 783 aa15.63■□□□□ 0.09
SF3B4-201ENST00000271628 KLHDC8BQ8IXV7 354 aa15.63■□□□□ 0.09
SF3B4-201ENST00000271628 SLC39A11Q8N1S5 342 aa15.63■□□□□ 0.09
SF3B4-201ENST00000271628 OR52K1Q8NGK4 314 aa15.63■□□□□ 0.09
SF3B4-201ENST00000271628 FATE1Q969F0 183 aa15.63■□□□□ 0.09
SF3B4-201ENST00000271628 CLSTN3Q9BQT9 956 aa15.63■□□□□ 0.09
SF3B4-201ENST00000271628 VN1R3Q9BXE9 311 aa15.63■□□□□ 0.09
SF3B4-201ENST00000271628 MLXIPLQ9NP71 852 aa15.63■□□□□ 0.09
SF3B4-201ENST00000271628 NDFIP2Q9NV92 336 aa15.63■□□□□ 0.09
SF3B4-201ENST00000271628 MPP6Q9NZW5 540 aa15.63■□□□□ 0.09
SF3B4-201ENST00000271628 LTBP2Q14767 1821 aa15.62■□□□□ 0.09
SF3B4-201ENST00000271628 CXorf49A8MYA2 514 aaPredicted RBP15.62■□□□□ 0.09
SF3B4-201ENST00000271628 C2CD2LO14523 706 aa15.62■□□□□ 0.09
SF3B4-201ENST00000271628 ANXA9O76027 345 aa15.62■□□□□ 0.09
SF3B4-201ENST00000271628 EZRP15311 586 aaKnown RBP15.62■□□□□ 0.09
SF3B4-201ENST00000271628 RPL17P18621 184 aaKnown RBP15.62■□□□□ 0.09
SF3B4-201ENST00000271628 LAG3P18627 525 aa15.62■□□□□ 0.09
SF3B4-201ENST00000271628 CMTR2Q8IYT2 770 aaKnown RBP15.62■□□□□ 0.09
SF3B4-201ENST00000271628 CNTD1Q8N815 330 aa15.62■□□□□ 0.09
SF3B4-201ENST00000271628 BANPQ8N9N5 519 aa15.62■□□□□ 0.09
SF3B4-201ENST00000271628 ARMC5Q96C12 935 aa15.62■□□□□ 0.09
SF3B4-201ENST00000271628 PAWRQ96IZ0 340 aaKnown RBP15.62■□□□□ 0.09
SF3B4-201ENST00000271628 FCRL5Q96RD9 977 aa15.62■□□□□ 0.09
SF3B4-201ENST00000271628 DNMT3LQ9UJW3 386 aa15.62■□□□□ 0.09
SF3B4-201ENST00000271628 DRGXA6NNA5 263 aa15.61■□□□□ 0.09
SF3B4-201ENST00000271628 NEBLO76041 1014 aa15.61■□□□□ 0.09
SF3B4-201ENST00000271628 NQO1P15559 274 aaKnown RBP15.61■□□□□ 0.09
SF3B4-201ENST00000271628 TAC1P20366 129 aa15.61■□□□□ 0.09
SF3B4-201ENST00000271628 SKIV2L2P42285 1042 aaKnown RBP15.61■□□□□ 0.09
SF3B4-201ENST00000271628 PAPOLAP51003 745 aaKnown RBP15.61■□□□□ 0.09
SF3B4-201ENST00000271628 WDR4P57081 412 aaKnown RBP15.61■□□□□ 0.09
SF3B4-201ENST00000271628 SLC18A2Q05940 514 aa15.61■□□□□ 0.09
SF3B4-201ENST00000271628 CCDC15Q0P6D6 951 aa15.61■□□□□ 0.09
SF3B4-201ENST00000271628 CDH17Q12864 832 aa15.61■□□□□ 0.09
SF3B4-201ENST00000271628 BTG3Q14201 252 aaPredicted RBP15.61■□□□□ 0.09
SF3B4-201ENST00000271628 SPANXN3Q5MJ09 141 aa15.61■□□□□ 0.09
SF3B4-201ENST00000271628 TRMT10BQ6PF06 316 aaKnown RBP15.61■□□□□ 0.09
SF3B4-201ENST00000271628 ARHGAP36Q6ZRI8 547 aa15.61■□□□□ 0.09
SF3B4-201ENST00000271628 TBC1D1Q86TI0 1168 aaPredicted RBP15.61■□□□□ 0.09
SF3B4-201ENST00000271628 OXNAD1Q96HP4 312 aaPredicted RBP15.61■□□□□ 0.09
SF3B4-201ENST00000271628 ZNF512Q96ME7 567 aaPredicted RBP15.61■□□□□ 0.09
SF3B4-201ENST00000271628 PAIP2Q9BPZ3 127 aaKnown RBP15.61■□□□□ 0.09
SF3B4-201ENST00000271628 MLPHQ9BV36 600 aaPredicted RBP15.61■□□□□ 0.09
SF3B4-201ENST00000271628 PITPNM3Q9BZ71 974 aa15.61■□□□□ 0.09
SF3B4-201ENST00000271628 RETREG1Q9H6L5 497 aa15.61■□□□□ 0.09
SF3B4-201ENST00000271628 CCSER2Q9H7U1 834 aa15.61■□□□□ 0.09
SF3B4-201ENST00000271628 ECT2Q9H8V3 914 aa15.61■□□□□ 0.09
SF3B4-201ENST00000271628 RC3H2Q9HBD1 1191 aaKnown RBP15.61■□□□□ 0.09
SF3B4-201ENST00000271628 NOD2Q9HC29 1040 aa15.61■□□□□ 0.09
SF3B4-201ENST00000271628 SYBUQ9NX95 663 aa15.61■□□□□ 0.09
SF3B4-201ENST00000271628 IPO11Q9UI26 975 aaKnown RBP15.61■□□□□ 0.09
SF3B4-201ENST00000271628 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.61■□□□□ 0.09
SF3B4-201ENST00000271628 ALDH1A3P47895 512 aa15.61■□□□□ 0.09
SF3B4-201ENST00000271628 NCALDP61601 193 aa15.61■□□□□ 0.09
SF3B4-201ENST00000271628 HNRNPDQ14103 355 aaKnown RBP15.61■□□□□ 0.09
SF3B4-201ENST00000271628 CRYMQ14894 314 aa15.61■□□□□ 0.09
SF3B4-201ENST00000271628 LRRC26Q2I0M4 334 aa15.61■□□□□ 0.09
SF3B4-201ENST00000271628 HHATQ5VTY9 493 aa15.61■□□□□ 0.09
SF3B4-201ENST00000271628 FBXL22Q6P050 247 aa15.61■□□□□ 0.09
SF3B4-201ENST00000271628 KLHDC10Q6PID8 442 aa15.61■□□□□ 0.09
SF3B4-201ENST00000271628 RGS9BPQ6ZS82 235 aa15.61■□□□□ 0.09
SF3B4-201ENST00000271628 TMEM199Q8N511 208 aa15.61■□□□□ 0.09
SF3B4-201ENST00000271628 HERC2P3Q9BVR0 1158 aa15.61■□□□□ 0.09
SF3B4-201ENST00000271628 IL22Q9GZX6 179 aa15.61■□□□□ 0.09
SF3B4-201ENST00000271628 GLOD4Q9HC38 313 aa15.61■□□□□ 0.09
SF3B4-201ENST00000271628 SMYD2Q9NRG4 433 aa15.61■□□□□ 0.09
SF3B4-201ENST00000271628 SPG21Q9NZD8 308 aa15.61■□□□□ 0.09
SF3B4-201ENST00000271628 STK39Q9UEW8 545 aa15.61■□□□□ 0.09
SF3B4-201ENST00000271628 STARD13Q9Y3M8 1113 aa15.61■□□□□ 0.09
SF3B4-201ENST00000271628 DOCK4Q8N1I0 1966 aa15.61■□□□□ 0.09
SF3B4-201ENST00000271628 HMBSP08397 361 aa15.6■□□□□ 0.09
SF3B4-201ENST00000271628 RENBPP51606 427 aa15.6■□□□□ 0.09
SF3B4-201ENST00000271628 CRADDP78560 199 aa15.6■□□□□ 0.09
SF3B4-201ENST00000271628 DNAJC3Q13217 504 aa15.6■□□□□ 0.09
SF3B4-201ENST00000271628 FRG1Q14331 258 aaKnown RBP15.6■□□□□ 0.09
SF3B4-201ENST00000271628 RAP1GAP2Q684P5 730 aa15.6■□□□□ 0.09
SF3B4-201ENST00000271628 MARK2Q7KZI7 788 aaKnown RBP15.6■□□□□ 0.09
SF3B4-201ENST00000271628 TMEM135Q86UB9 458 aa15.6■□□□□ 0.09
SF3B4-201ENST00000271628 FITM2Q8N6M3 262 aa15.6■□□□□ 0.09
SF3B4-201ENST00000271628 USP33Q8TEY7 942 aa15.6■□□□□ 0.09
SF3B4-201ENST00000271628 MYRFLQ96LU7 910 aa15.6■□□□□ 0.09
SF3B4-201ENST00000271628 NACA2Q9H009 215 aa15.6■□□□□ 0.09
SF3B4-201ENST00000271628 CYP4F11Q9HBI6 524 aa15.6■□□□□ 0.09
SF3B4-201ENST00000271628 RBM22Q9NW64 420 aaKnown RBP eCLIP15.6■□□□□ 0.09
SF3B4-201ENST00000271628 PIH1D1Q9NWS0 290 aaKnown RBP15.6■□□□□ 0.09
SF3B4-201ENST00000271628 BAIAP2L1Q9UHR4 511 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms