RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 ERAP1Q9NZ08 941 aa17.39■□□□□ 0.37
SPG7-201ENST00000268704 PIM2Q9P1W9 311 aa17.39■□□□□ 0.37
SPG7-201ENST00000268704 MATN2O00339 956 aa17.38■□□□□ 0.37
SPG7-201ENST00000268704 NAGLUP54802 743 aa17.38■□□□□ 0.37
SPG7-201ENST00000268704 NAB1Q13506 487 aa17.38■□□□□ 0.37
SPG7-201ENST00000268704 ADGRE1Q14246 886 aa17.38■□□□□ 0.37
SPG7-201ENST00000268704 ZNF460Q14592 562 aa17.38■□□□□ 0.37
SPG7-201ENST00000268704 PIGGQ5H8A4 983 aa17.38■□□□□ 0.37
SPG7-201ENST00000268704 KLHDC10Q6PID8 442 aa17.38■□□□□ 0.37
SPG7-201ENST00000268704 FAM81AQ8TBF8 368 aa17.38■□□□□ 0.37
SPG7-201ENST00000268704 ACE2Q9BYF1 805 aaPredicted RBP17.38■□□□□ 0.37
SPG7-201ENST00000268704 ILKAPQ9H0C8 392 aaPredicted RBP17.38■□□□□ 0.37
SPG7-201ENST00000268704 C6orf203Q9P0P8 240 aaPredicted RBP17.38■□□□□ 0.37
SPG7-201ENST00000268704 PPP1R1BQ9UD71 204 aaPredicted RBP17.38■□□□□ 0.37
SPG7-201ENST00000268704 SMIM31A0A1B0GVY4 71 aa17.38■□□□□ 0.37
SPG7-201ENST00000268704 THRAP10827 490 aa17.38■□□□□ 0.37
SPG7-201ENST00000268704 NDUFV1P49821 464 aa17.38■□□□□ 0.37
SPG7-201ENST00000268704 ZDHHC17Q8IUH5 632 aa17.38■□□□□ 0.37
SPG7-201ENST00000268704 ZSCAN18Q8TBC5 510 aaPredicted RBP17.38■□□□□ 0.37
SPG7-201ENST00000268704 TMA16Q96EY4 203 aaKnown RBP17.38■□□□□ 0.37
SPG7-201ENST00000268704 VPS39Q96JC1 886 aa17.38■□□□□ 0.37
SPG7-201ENST00000268704 NPAS2Q99743 824 aa17.38■□□□□ 0.37
SPG7-201ENST00000268704 NAT9Q9BTE0 207 aa17.38■□□□□ 0.37
SPG7-201ENST00000268704 LRRC40Q9H9A6 602 aa17.38■□□□□ 0.37
SPG7-201ENST00000268704 PREBQ9HCU5 417 aa17.38■□□□□ 0.37
SPG7-201ENST00000268704 C20orf96Q9NUD7 363 aaPredicted RBP17.38■□□□□ 0.37
SPG7-201ENST00000268704 GNEQ9Y223 722 aaKnown RBP17.38■□□□□ 0.37
SPG7-201ENST00000268704 RGSL1A5PLK6 1076 aa17.37■□□□□ 0.37
SPG7-201ENST00000268704 TOMM70O94826 608 aa17.37■□□□□ 0.37
SPG7-201ENST00000268704 SBK3P0C264 359 aa17.37■□□□□ 0.37
SPG7-201ENST00000268704 ACAT1P24752 427 aaKnown RBP17.37■□□□□ 0.37
SPG7-201ENST00000268704 GLUD2P49448 558 aa17.37■□□□□ 0.37
SPG7-201ENST00000268704 NUMBP49757 651 aa17.37■□□□□ 0.37
SPG7-201ENST00000268704 CYLC2Q14093 348 aaPredicted RBP17.37■□□□□ 0.37
SPG7-201ENST00000268704 SH3D19Q5HYK7 790 aa17.37■□□□□ 0.37
SPG7-201ENST00000268704 RARS2Q5T160 578 aaKnown RBP17.37■□□□□ 0.37
SPG7-201ENST00000268704 SYPL2Q5VXT5 272 aa17.37■□□□□ 0.37
SPG7-201ENST00000268704 SEL1L3Q68CR1 1132 aa17.37■□□□□ 0.37
SPG7-201ENST00000268704 RNF169Q8NCN4 708 aa17.37■□□□□ 0.37
SPG7-201ENST00000268704 EIF2AQ9BY44 585 aaKnown RBP17.37■□□□□ 0.37
SPG7-201ENST00000268704 OXSMQ9NWU1 459 aa17.37■□□□□ 0.37
SPG7-201ENST00000268704 KPNA7A9QM74 516 aa17.37■□□□□ 0.37
SPG7-201ENST00000268704 CLDN5O00501 218 aa17.37■□□□□ 0.37
SPG7-201ENST00000268704 GRID2O43424 1007 aa17.37■□□□□ 0.37
SPG7-201ENST00000268704 DENRO43583 198 aaKnown RBP17.37■□□□□ 0.37
SPG7-201ENST00000268704 AP1G1O43747 822 aa17.37■□□□□ 0.37
SPG7-201ENST00000268704 TRPA1O75762 1119 aa17.37■□□□□ 0.37
SPG7-201ENST00000268704 STAU1O95793 577 aaKnown RBP17.37■□□□□ 0.37
SPG7-201ENST00000268704 PTPN3P26045 913 aa17.37■□□□□ 0.37
SPG7-201ENST00000268704 MATKP42679 507 aa17.37■□□□□ 0.37
SPG7-201ENST00000268704 BCAT1P54687 386 aa17.37■□□□□ 0.37
SPG7-201ENST00000268704 MPP3Q13368 585 aa17.37■□□□□ 0.37
SPG7-201ENST00000268704 GRM3Q14832 879 aa17.37■□□□□ 0.37
SPG7-201ENST00000268704 PDK1Q15118 436 aa17.37■□□□□ 0.37
SPG7-201ENST00000268704 MYLK3Q32MK0 819 aa17.37■□□□□ 0.37
SPG7-201ENST00000268704 PABPC1LQ4VXU2 614 aaKnown RBP17.37■□□□□ 0.37
SPG7-201ENST00000268704 KCNMB4Q86W47 210 aa17.37■□□□□ 0.37
SPG7-201ENST00000268704 SULF1Q8IWU6 871 aa17.37■□□□□ 0.37
SPG7-201ENST00000268704 ZNF513Q8N8E2 541 aaPredicted RBP17.37■□□□□ 0.37
SPG7-201ENST00000268704 ANKRD52Q8NB46 1076 aa17.37■□□□□ 0.37
SPG7-201ENST00000268704 KBTBD7Q8WVZ9 684 aa17.37■□□□□ 0.37
SPG7-201ENST00000268704 ISL2Q96A47 359 aa17.37■□□□□ 0.37
SPG7-201ENST00000268704 ANLNQ9NQW6 1124 aa17.37■□□□□ 0.37
SPG7-201ENST00000268704 PLXNA1Q9UIW2 1896 aa17.37■□□□□ 0.37
SPG7-201ENST00000268704 ZBTB24O43167 697 aaPredicted RBP17.36■□□□□ 0.37
SPG7-201ENST00000268704 CNMDO75829 334 aa17.36■□□□□ 0.37
SPG7-201ENST00000268704 ASLP04424 464 aa17.36■□□□□ 0.37
SPG7-201ENST00000268704 LGALS2P05162 132 aa17.36■□□□□ 0.37
SPG7-201ENST00000268704 NELFEP18615 380 aaKnown RBP17.36■□□□□ 0.37
SPG7-201ENST00000268704 KIZQ2M2Z5 673 aa17.36■□□□□ 0.37
SPG7-201ENST00000268704 HFE2Q6ZVN8 426 aa17.36■□□□□ 0.37
SPG7-201ENST00000268704 ZFP28Q8NHY6 868 aa17.36■□□□□ 0.37
SPG7-201ENST00000268704 AFG1LQ8WV93 481 aa17.36■□□□□ 0.37
SPG7-201ENST00000268704 DGCR14Q96DF8 476 aaKnown RBP17.36■□□□□ 0.37
SPG7-201ENST00000268704 SUDS3Q9H7L9 328 aaPredicted RBP17.36■□□□□ 0.37
SPG7-201ENST00000268704 WDR41Q9HAD4 459 aa17.36■□□□□ 0.37
SPG7-201ENST00000268704 GOLGA2P5Q9HBQ8 144 aa17.36■□□□□ 0.37
SPG7-201ENST00000268704 TMEM114B3SHH9 223 aa17.36■□□□□ 0.37
SPG7-201ENST00000268704 M0QYT0 321 aa17.36■□□□□ 0.37
SPG7-201ENST00000268704 SPTLC1O15269 473 aa17.36■□□□□ 0.37
SPG7-201ENST00000268704 HDAC3O15379 428 aa17.36■□□□□ 0.37
SPG7-201ENST00000268704 HNRNPRO43390 633 aaKnown RBP17.36■□□□□ 0.37
SPG7-201ENST00000268704 USP2O75604 605 aaPredicted RBP17.36■□□□□ 0.37
SPG7-201ENST00000268704 BEST1O76090 585 aa17.36■□□□□ 0.37
SPG7-201ENST00000268704 PTPN1P18031 435 aaKnown RBP17.36■□□□□ 0.37
SPG7-201ENST00000268704 TFEBP19484 476 aa17.36■□□□□ 0.37
SPG7-201ENST00000268704 RPL5P46777 297 aaKnown RBP17.36■□□□□ 0.37
SPG7-201ENST00000268704 C16orf89Q6UX73 402 aa17.36■□□□□ 0.37
SPG7-201ENST00000268704 CTU1Q7Z7A3 348 aaKnown RBP17.36■□□□□ 0.37
SPG7-201ENST00000268704 TMEM135Q86UB9 458 aa17.36■□□□□ 0.37
SPG7-201ENST00000268704 KCTD4Q8WVF5 259 aa17.36■□□□□ 0.37
SPG7-201ENST00000268704 SCYL1Q96KG9 808 aa17.36■□□□□ 0.37
SPG7-201ENST00000268704 PIGVQ9NUD9 493 aa17.36■□□□□ 0.37
SPG7-201ENST00000268704 FIS1Q9Y3D6 152 aa17.36■□□□□ 0.37
SPG7-201ENST00000268704 I6L893 689 aaPredicted RBP17.36■□□□□ 0.37
SPG7-201ENST00000268704 AKAP5P24588 427 aa17.36■□□□□ 0.37
SPG7-201ENST00000268704 NMBRP28336 390 aa17.36■□□□□ 0.37
SPG7-201ENST00000268704 RPL14P50914 215 aaKnown RBP17.36■□□□□ 0.37
SPG7-201ENST00000268704 USP46P62068 366 aa17.36■□□□□ 0.37
SPG7-201ENST00000268704 NRF1Q16656 503 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms