RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 SATL1Q86VE3 508 aa11.74□□□□□ -0.53
CLSTN3-201ENST00000266546 ZDHHC17Q8IUH5 632 aa11.74□□□□□ -0.53
CLSTN3-201ENST00000266546 COLGALT1Q8NBJ5 622 aa11.74□□□□□ -0.53
CLSTN3-201ENST00000266546 PLGRKTQ9HBL7 147 aa11.74□□□□□ -0.53
CLSTN3-201ENST00000266546 SLC7A8Q9UHI5 535 aa11.74□□□□□ -0.53
CLSTN3-201ENST00000266546 GIT1Q9Y2X7 761 aa11.74□□□□□ -0.53
CLSTN3-201ENST00000266546 MYH9P35579 1960 aaKnown RBP11.74□□□□□ -0.53
CLSTN3-201ENST00000266546 MYH11P35749 1972 aa11.74□□□□□ -0.53
CLSTN3-201ENST00000266546 MOXD2PA6NHM9 499 aa11.74□□□□□ -0.53
CLSTN3-201ENST00000266546 TBC1D4O60343 1298 aa11.74□□□□□ -0.53
CLSTN3-201ENST00000266546 CYP2F1P24903 491 aa11.74□□□□□ -0.53
CLSTN3-201ENST00000266546 TBCELQ5QJ74 424 aa11.74□□□□□ -0.53
CLSTN3-201ENST00000266546 FNBP1LQ5T0N5 605 aa11.74□□□□□ -0.53
CLSTN3-201ENST00000266546 BBS5Q8N3I7 341 aa11.74□□□□□ -0.53
CLSTN3-201ENST00000266546 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.74□□□□□ -0.53
CLSTN3-201ENST00000266546 USP33Q8TEY7 942 aa11.74□□□□□ -0.53
CLSTN3-201ENST00000266546 DCUN1D1Q96GG9 259 aa11.74□□□□□ -0.53
CLSTN3-201ENST00000266546 SIK2Q9H0K1 926 aa11.74□□□□□ -0.53
CLSTN3-201ENST00000266546 CYLDQ9NQC7 956 aa11.74□□□□□ -0.53
CLSTN3-201ENST00000266546 PTTG2Q9NZH5 202 aa11.74□□□□□ -0.53
CLSTN3-201ENST00000266546 PLA2G4CQ9UP65 541 aa11.74□□□□□ -0.53
CLSTN3-201ENST00000266546 ACOT9Q9Y305 439 aa11.74□□□□□ -0.53
CLSTN3-201ENST00000266546 POLR2AP24928 1970 aaKnown RBP11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 SIGLEC16A6NMB1 481 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 GOLGA8CPA6NN73 597 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 CLOCKO15516 846 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 BCL10O95999 233 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 KRT8P05787 483 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 ZNF865P0CJ78 1059 aaPredicted RBP11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 CYP3A5P20815 502 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 FGFR3P22607 806 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 MGAT1P26572 445 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 NEK3P51956 506 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 PRKCZQ05513 592 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 NSUN2Q08J23 767 aaKnown RBP eCLIP11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 USP4Q13107 963 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 DCAF6Q58WW2 860 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 ZBTB41Q5SVQ8 909 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 ASRGL1Q7L266 308 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 TRIM74Q86UV6 250 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 TRIM73Q86UV7 250 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 TMEM86AQ8N2M4 240 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 RNF139Q8WU17 664 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 FAR2Q96K12 515 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 DACH2Q96NX9 599 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 EIF2B2P49770 351 aaKnown RBP11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 NDST1P52848 882 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 FAM83EQ2M2I3 478 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 NAPEPLDQ6IQ20 393 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 FAM43BQ6ZT52 329 aaPredicted RBP11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 ILDR2Q71H61 639 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 SCN4BQ8IWT1 228 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 SEPT8Q92599 483 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 TIMMDC1Q9NPL8 285 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 IARS2Q9NSE4 1012 aaKnown RBP11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 AP4E1Q9UPM8 1137 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 CYB561D2O14569 222 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 UBDO15205 165 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 ADCY6O43306 1168 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 SNX2O60749 519 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 TRMUO75648 421 aaKnown RBP11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 FAM155BO75949 473 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 MMP8P22894 467 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 AQP4P55087 323 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 ANKRD22Q5VYY1 191 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 CES3Q6UWW8 571 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 ADGRF2Q8IZF7 708 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 ZNF513Q8N8E2 541 aaPredicted RBP11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 LMO3Q8TAP4 145 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 PLEKHO2Q8TD55 490 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 PPP1R13LQ8WUF5 828 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 TSPAN17Q96FV3 270 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 APOL2Q9BQE5 337 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 TXLNGYQ9BZA5 131 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 LHX5Q9H2C1 402 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 RNF19AQ9NV58 838 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 VTI1BQ9UEU0 232 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 CDH22Q9UJ99 828 aa11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 RP1L1Q8IWN7 2480 aaPredicted RBP11.73□□□□□ -0.53
CLSTN3-201ENST00000266546 RGSL1A5PLK6 1076 aa11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 PIGNO95427 931 aa11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 KRT75O95678 551 aa11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 FASP25445 335 aa11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 RPL9P32969 192 aaKnown RBP11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 CLDN10P78369 228 aa11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 NEDD8Q15843 81 aa11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 ZNF554Q86TJ5 538 aa11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 TTC30AQ86WT1 665 aa11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 DHFR2Q86XF0 187 aa11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 DCP1BQ8IZD4 617 aaKnown RBP11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 ACMSDQ8TDX5 336 aa11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 BTBD9Q96Q07 612 aa11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 NMRAL1Q9HBL8 299 aa11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 CYP4F12Q9HCS2 524 aa11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 NR2E3Q9Y5X4 410 aa11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 DFFAO00273 331 aa11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 DDHD2O94830 711 aa11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 SUPT7LO94864 414 aa11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 MT-CO1P00395 513 aa11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 ASGR1P07306 291 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms