RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 LAYNQ6UX15 382 aa10□□□□□ -0.81
VPS41-201ENST00000265745 NOP9Q86U38 636 aaKnown RBP10□□□□□ -0.81
VPS41-201ENST00000265745 SLCO6A1Q86UG4 719 aa10□□□□□ -0.81
VPS41-201ENST00000265745 ERICH1Q86X53 443 aa10□□□□□ -0.81
VPS41-201ENST00000265745 XYLT1Q86Y38 959 aa10□□□□□ -0.81
VPS41-201ENST00000265745 ZNF683Q8IZ20 524 aa10□□□□□ -0.81
VPS41-201ENST00000265745 SETD7Q8WTS6 366 aaKnown RBP10□□□□□ -0.81
VPS41-201ENST00000265745 ADAMTS14Q8WXS8 1223 aa10□□□□□ -0.81
VPS41-201ENST00000265745 C1orf74Q96LT6 269 aa10□□□□□ -0.81
VPS41-201ENST00000265745 SPAG5Q96R06 1193 aa10□□□□□ -0.81
VPS41-201ENST00000265745 TKTL2Q9H0I9 626 aa10□□□□□ -0.81
VPS41-201ENST00000265745 SIK2Q9H0K1 926 aa10□□□□□ -0.81
VPS41-201ENST00000265745 EBF2Q9HAK2 575 aa10□□□□□ -0.81
VPS41-201ENST00000265745 TMEM51Q9NW97 253 aa10□□□□□ -0.81
VPS41-201ENST00000265745 TMEM59LQ9UK28 342 aa10□□□□□ -0.81
VPS41-201ENST00000265745 STAP1Q9ULZ2 295 aa10□□□□□ -0.81
VPS41-201ENST00000265745 PLXND1Q9Y4D7 1925 aa9.99□□□□□ -0.81
VPS41-201ENST00000265745 TMEM8BA6NDV4 472 aa9.99□□□□□ -0.81
VPS41-201ENST00000265745 DRGXA6NNA5 263 aa9.99□□□□□ -0.81
VPS41-201ENST00000265745 F8VZ95 297 aa9.99□□□□□ -0.81
VPS41-201ENST00000265745 MCF2LO15068 1137 aa9.99□□□□□ -0.81
VPS41-201ENST00000265745 VILLO15195 856 aa9.99□□□□□ -0.81
VPS41-201ENST00000265745 FLRT2O43155 660 aa9.99□□□□□ -0.81
VPS41-201ENST00000265745 PCDHGA12O60330 932 aa9.99□□□□□ -0.81
VPS41-201ENST00000265745 CNTN5O94779 1100 aa9.99□□□□□ -0.81
VPS41-201ENST00000265745 IL1BP01584 269 aa9.99□□□□□ -0.81
VPS41-201ENST00000265745 FTH1P19P0C7X4 201 aa9.99□□□□□ -0.81
VPS41-201ENST00000265745 DRD3P35462 400 aa9.99□□□□□ -0.81
VPS41-201ENST00000265745 FLT3P36888 993 aa9.99□□□□□ -0.81
VPS41-201ENST00000265745 CTSKP43235 329 aa9.99□□□□□ -0.81
VPS41-201ENST00000265745 CCR5P51681 352 aa9.99□□□□□ -0.81
VPS41-201ENST00000265745 METAP1P53582 386 aa9.99□□□□□ -0.81
VPS41-201ENST00000265745 ADPRHP54922 357 aa9.99□□□□□ -0.81
VPS41-201ENST00000265745 DLG2Q15700 870 aa9.99□□□□□ -0.81
VPS41-201ENST00000265745 ALFQ53S48 1182 aa9.99□□□□□ -0.81
VPS41-201ENST00000265745 C2CD6Q53TS8 623 aa9.99□□□□□ -0.81
VPS41-201ENST00000265745 ARTNQ5T4W7 220 aa9.99□□□□□ -0.81
VPS41-201ENST00000265745 FAM102AQ5T9C2 384 aaPredicted RBP9.99□□□□□ -0.81
VPS41-201ENST00000265745 CDKAL1Q5VV42 579 aa9.99□□□□□ -0.81
VPS41-201ENST00000265745 LRSAM1Q6UWE0 723 aa9.99□□□□□ -0.81
VPS41-201ENST00000265745 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.99□□□□□ -0.81
VPS41-201ENST00000265745 SND1Q7KZF4 910 aaKnown RBP eCLIP9.99□□□□□ -0.81
VPS41-201ENST00000265745 PNPLA1Q8N8W4 532 aa9.99□□□□□ -0.81
VPS41-201ENST00000265745 OR14C36Q8NHC7 312 aa9.99□□□□□ -0.81
VPS41-201ENST00000265745 BAHD1Q8TBE0 780 aaPredicted RBP9.99□□□□□ -0.81
VPS41-201ENST00000265745 RHBDD1Q8TEB9 315 aa9.99□□□□□ -0.81
VPS41-201ENST00000265745 CPA5Q8WXQ8 436 aa9.99□□□□□ -0.81
VPS41-201ENST00000265745 FAM131CQ96AQ9 280 aa9.99□□□□□ -0.81
VPS41-201ENST00000265745 TBCBQ99426 244 aa9.99□□□□□ -0.81
VPS41-201ENST00000265745 TAB2Q9NYJ8 693 aa9.99□□□□□ -0.81
VPS41-201ENST00000265745 VPS28Q9UK41 221 aa9.99□□□□□ -0.81
VPS41-201ENST00000265745 SARDHQ9UL12 918 aa9.99□□□□□ -0.81
VPS41-201ENST00000265745 ZMIZ1Q9ULJ6 1067 aa9.99□□□□□ -0.81
VPS41-201ENST00000265745 PPM1HQ9ULR3 514 aa9.99□□□□□ -0.81
VPS41-201ENST00000265745 BTBD3Q9Y2F9 522 aa9.99□□□□□ -0.81
VPS41-201ENST00000265745 SNX10Q9Y5X0 201 aa9.99□□□□□ -0.81
VPS41-201ENST00000265745 FRYQ5TBA9 3013 aa9.99□□□□□ -0.81
VPS41-201ENST00000265745 PCDH15Q96QU1 1955 aa9.99□□□□□ -0.81
VPS41-201ENST00000265745 PI4KAP42356 2102 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 IGF2RP11717 2491 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 ZFHX4Q86UP3 3567 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 IGLV3-10A0A075B6K4 115 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 TBC1D3DA0A087WVF3 549 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 TBC1D3IA0A087WXS9 549 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 TBC1D3EA0A087X179 549 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 TBC1D3KA0A087X1G2 549 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 FAM170AA1A519 330 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 TBC1D3FA6NER0 549 aaPredicted RBP9.98□□□□□ -0.81
VPS41-201ENST00000265745 TBC1D3LB9A6J9 549 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 H0Y8X5 98 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 WNT9AO14904 365 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 LATO43561 262 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 DFNA5O60443 496 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 DKK1O94907 266 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 MT-CO1P00395 513 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 WNT1P04628 370 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 MMEP08473 750 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 TBC1D3HP0C7X1 549 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 ZNF18P17022 549 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 SULT1E1P49888 294 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 NOMO3P69849 1222 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 DEUP1Q05D60 604 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 KRT31Q15323 416 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 ACCSLQ4AC99 568 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 ACBD5Q5T8D3 534 aaPredicted RBP9.98□□□□□ -0.81
VPS41-201ENST00000265745 FAM46CQ5VWP2 391 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 NAA35Q5VZE5 725 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 TBC1D3GQ6DHY5 549 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 TBC1D3CQ6IPX1 549 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 TRNP1Q6NT89 227 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 LYPD8Q6UX82 237 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 RBM43Q6ZSC3 357 aaKnown RBP9.98□□□□□ -0.81
VPS41-201ENST00000265745 Q6ZVU0 165 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 ARCQ7LC44 396 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 BNIPLQ7Z465 357 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 ADAT2Q7Z6V5 191 aaKnown RBP9.98□□□□□ -0.81
VPS41-201ENST00000265745 DSG4Q86SJ6 1040 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 SETD3Q86TU7 594 aaPredicted RBP9.98□□□□□ -0.81
VPS41-201ENST00000265745 TBC1D3Q8IZP1 549 aaPredicted RBP9.98□□□□□ -0.81
VPS41-201ENST00000265745 SH2D3CQ8N5H7 860 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms