RNA–Protein interactions for RNA: ENST00000263966.7

USP13-201, Transcript of ubiquitin specific peptidase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP13, Length 8,323 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-201ENST00000263966 VGLL3A8MV65 326 aa16.75■□□□□ 0.27
USP13-201ENST00000263966 CYP1A1P04798 512 aaPredicted RBP16.75■□□□□ 0.27
USP13-201ENST00000263966 GHRP10912 638 aa16.75■□□□□ 0.27
USP13-201ENST00000263966 ME2P23368 584 aa16.75■□□□□ 0.27
USP13-201ENST00000263966 ZC2HC1CQ53FD0 456 aaPredicted RBP16.75■□□□□ 0.27
USP13-201ENST00000263966 SPANXN3Q5MJ09 141 aa16.75■□□□□ 0.27
USP13-201ENST00000263966 GSPT2Q8IYD1 628 aaKnown RBP16.75■□□□□ 0.27
USP13-201ENST00000263966 SLC9A6Q92581 669 aa16.75■□□□□ 0.27
USP13-201ENST00000263966 A0A087X1B8 175 aa16.75■□□□□ 0.27
USP13-201ENST00000263966 IFNGP01579 166 aa16.75■□□□□ 0.27
USP13-201ENST00000263966 JCHAINP01591 159 aa16.75■□□□□ 0.27
USP13-201ENST00000263966 ARL3P36405 182 aa16.75■□□□□ 0.27
USP13-201ENST00000263966 METTL7BQ6UX53 244 aa16.75■□□□□ 0.27
USP13-201ENST00000263966 SLC4A11Q8NBS3 891 aa16.75■□□□□ 0.27
USP13-201ENST00000263966 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.74■□□□□ 0.27
USP13-201ENST00000263966 RIMS1Q86UR5 1692 aaKnown RBP16.74■□□□□ 0.27
USP13-201ENST00000263966 PP2D1A8MPX8 630 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 HOXB8P17481 243 aaPredicted RBP16.74■□□□□ 0.27
USP13-201ENST00000263966 MBTD1Q05BQ5 628 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 TMC8Q8IU68 726 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 ERP27Q96DN0 273 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 BTBD7Q9P203 1132 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 FGF10O15520 208 aaPredicted RBP16.74■□□□□ 0.27
USP13-201ENST00000263966 KCNH1O95259 989 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 CAP2P40123 477 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 FXR2P51116 673 aaKnown RBP eCLIP16.74■□□□□ 0.27
USP13-201ENST00000263966 NR1D2Q14995 579 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 CCDC80Q76M96 950 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 SYT12Q8IV01 421 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 FBXO22Q8NEZ5 403 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 OR5T3Q8NGG3 340 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 CHAMP1Q96JM3 812 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 C9orf72Q96LT7 481 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 FERD3LQ96RJ6 166 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 REEP1Q9H902 201 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 WHRNQ9P202 907 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 SDK1Q7Z5N4 2213 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 CYP17A1P05093 508 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 TAF8Q7Z7C8 310 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 USP50Q70EL3 339 aaPredicted RBP16.74■□□□□ 0.27
USP13-201ENST00000263966 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.74■□□□□ 0.27
USP13-201ENST00000263966 HIST1H2AAQ96QV6 131 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 RUSC1Q9BVN2 902 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 TRIM2Q9C040 744 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 MARCH2Q9P0N8 246 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 INVSQ9Y283 1065 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 SLC28A2O43868 658 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 CCNYL3P0C7X3 344 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 CPA3P15088 417 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 CCND1P24385 295 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 ITGA3P26006 1051 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 AP1S1P61966 158 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 PCNX4Q63HM2 1172 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 REM2Q8IYK8 340 aaPredicted RBP16.74■□□□□ 0.27
USP13-201ENST00000263966 SGCDQ92629 289 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 NSMCE2Q96MF7 247 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 CLIC5Q9NZA1 410 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 RPS6KA6Q9UK32 745 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 TMEM120BA0PK00 339 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 DDX3XO00571 662 aaKnown RBP eCLIP16.74■□□□□ 0.274e-6■□□□□ 10
USP13-201ENST00000263966 ITGA2P17301 1181 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 ITPKBP27987 946 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 VBP1P61758 197 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 PHC3Q8NDX5 983 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 RHOBTB2Q9BYZ6 727 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 PIF1Q9H611 641 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 CYP2F1P24903 491 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 ADORA2AP29274 412 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.74■□□□□ 0.27
USP13-201ENST00000263966 SLC4A5Q9BY07 1137 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 ZMYM5Q9UJ78 669 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 SNX13Q9Y5W8 968 aa16.74■□□□□ 0.27
USP13-201ENST00000263966 METTL6Q8TCB7 284 aa16.73■□□□□ 0.27
USP13-201ENST00000263966 HEXDCQ8WVB3 486 aa16.73■□□□□ 0.27
USP13-201ENST00000263966 ZNF607Q96SK3 696 aa16.73■□□□□ 0.27
USP13-201ENST00000263966 PDGFDQ9GZP0 370 aaPredicted RBP16.73■□□□□ 0.27
USP13-201ENST00000263966 PNPLA6Q8IY17 1366 aa16.73■□□□□ 0.27
USP13-201ENST00000263966 WRBO00258 174 aa16.73■□□□□ 0.27
USP13-201ENST00000263966 GATBO75879 557 aaKnown RBP16.73■□□□□ 0.27
USP13-201ENST00000263966 PRLRP16471 622 aa16.73■□□□□ 0.27
USP13-201ENST00000263966 ARFIP1P53367 373 aa16.73■□□□□ 0.27
USP13-201ENST00000263966 HECTD3Q5T447 861 aa16.73■□□□□ 0.27
USP13-201ENST00000263966 TMEM120AQ9BXJ8 343 aa16.73■□□□□ 0.27
USP13-201ENST00000263966 PXMP2Q9NR77 195 aa16.73■□□□□ 0.27
USP13-201ENST00000263966 PKP1Q13835 747 aa16.73■□□□□ 0.27
USP13-201ENST00000263966 MZT2BQ6NZ67 158 aa16.73■□□□□ 0.27
USP13-201ENST00000263966 CXXC5Q7LFL8 322 aaKnown RBP16.73■□□□□ 0.27
USP13-201ENST00000263966 HPS6Q86YV9 775 aa16.73■□□□□ 0.27
USP13-201ENST00000263966 SYN2Q92777 582 aaPredicted RBP16.73■□□□□ 0.27
USP13-201ENST00000263966 GIT1Q9Y2X7 761 aa16.73■□□□□ 0.27
USP13-201ENST00000263966 TBC1D3DA0A087WVF3 549 aa16.73■□□□□ 0.27
USP13-201ENST00000263966 TBC1D3IA0A087WXS9 549 aa16.73■□□□□ 0.27
USP13-201ENST00000263966 TBC1D3EA0A087X179 549 aa16.73■□□□□ 0.27
USP13-201ENST00000263966 TBC1D3KA0A087X1G2 549 aa16.73■□□□□ 0.27
USP13-201ENST00000263966 TBC1D3FA6NER0 549 aaPredicted RBP16.73■□□□□ 0.27
USP13-201ENST00000263966 TBC1D3LB9A6J9 549 aa16.73■□□□□ 0.27
USP13-201ENST00000263966 TBC1D3HP0C7X1 549 aa16.73■□□□□ 0.27
USP13-201ENST00000263966 KCNA5P22460 613 aa16.73■□□□□ 0.27
USP13-201ENST00000263966 AP5B1Q2VPB7 878 aa16.73■□□□□ 0.27
USP13-201ENST00000263966 LSM12Q3MHD2 195 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms