RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 CDH18Q13634 790 aa9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 HTR4Q13639 388 aa9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 DHX34Q14147 1143 aaKnown RBP9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 SYCP2LQ5T4T6 812 aa9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 TTC39BQ5VTQ0 682 aaPredicted RBP9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 NAIF1Q69YI7 327 aaPredicted RBP9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 IL31Q6EBC2 164 aa9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 BZW1Q7L1Q6 419 aaKnown RBP9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 OTOP3Q7RTS5 596 aa9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 MAATS1Q7Z4T9 603 aa9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 C12orf40Q86WS4 652 aa9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 CDKL3Q8IVW4 592 aaPredicted RBP9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 CCDC13Q8IYE1 715 aa9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 HTR3CQ8WXA8 447 aa9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 ELSPBP1Q96BH3 223 aa9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 HDAC11Q96DB2 347 aa9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 ALG14Q96F25 216 aa9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 ZNF419Q96HQ0 510 aaPredicted RBP9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 MUC3BQ9H195 1237 aa9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 EPB41L5Q9HCM4 733 aa9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 ABCB8Q9NUT2 735 aa9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 OBP2AQ9NY56 170 aa9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 GTSE1Q9NYZ3 720 aa9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 EPS15L1Q9UBC2 864 aa9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 LIMD1Q9UGP4 676 aa9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 IPO11Q9UI26 975 aaKnown RBP9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 SNX24Q9Y343 169 aa9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 RAD54BQ9Y620 910 aa9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 ILVBLA1L0T0 632 aa9.95□□□□□ -0.82
SNRNP40-201ENST00000263694 ARHGAP42A6NI28 874 aa9.95□□□□□ -0.82
SNRNP40-201ENST00000263694 HACD1B0YJ81 288 aa9.95□□□□□ -0.82
SNRNP40-201ENST00000263694 RNF103O00237 685 aa9.95□□□□□ -0.82
SNRNP40-201ENST00000263694 CBX4O00257 560 aa9.95□□□□□ -0.82
SNRNP40-201ENST00000263694 NCAM2O15394 837 aa9.95□□□□□ -0.82
SNRNP40-201ENST00000263694 CTIFO43310 598 aaKnown RBP9.95□□□□□ -0.82
SNRNP40-201ENST00000263694 ADH5P11766 374 aa9.95□□□□□ -0.82
SNRNP40-201ENST00000263694 PSMC3P17980 439 aa9.95□□□□□ -0.82
SNRNP40-201ENST00000263694 CCNCP24863 283 aa9.95□□□□□ -0.82
SNRNP40-201ENST00000263694 PTPN3P26045 913 aa9.95□□□□□ -0.82
SNRNP40-201ENST00000263694 HLA-FP30511 346 aa9.95□□□□□ -0.82
SNRNP40-201ENST00000263694 ETFBP38117 255 aa9.95□□□□□ -0.82
SNRNP40-201ENST00000263694 RPL21P46778 160 aaKnown RBP9.95□□□□□ -0.82
SNRNP40-201ENST00000263694 SLC6A11P48066 632 aa9.95□□□□□ -0.82
SNRNP40-201ENST00000263694 YBEYP58557 167 aaPredicted RBP9.95□□□□□ -0.82
SNRNP40-201ENST00000263694 FCHO2Q0JRZ9 810 aa9.95□□□□□ -0.82
SNRNP40-201ENST00000263694 PTK6Q13882 451 aa9.95□□□□□ -0.82
SNRNP40-201ENST00000263694 AAK1Q2M2I8 961 aa9.95□□□□□ -0.82
SNRNP40-201ENST00000263694 GAB4Q2WGN9 574 aa9.95□□□□□ -0.82
SNRNP40-201ENST00000263694 C6orf118Q5T5N4 469 aa9.95□□□□□ -0.82
SNRNP40-201ENST00000263694 FAXCQ5TGI0 409 aa9.95□□□□□ -0.82
SNRNP40-201ENST00000263694 RNF43Q68DV7 783 aa9.95□□□□□ -0.82
SNRNP40-201ENST00000263694 HEATR6Q6AI08 1181 aaKnown RBP9.95□□□□□ -0.82
SNRNP40-201ENST00000263694 LINGO4Q6UY18 593 aa9.95□□□□□ -0.82
SNRNP40-201ENST00000263694 SETD3Q86TU7 594 aaPredicted RBP9.95□□□□□ -0.82
SNRNP40-201ENST00000263694 YAF2Q8IY57 180 aa9.95□□□□□ -0.82
SNRNP40-201ENST00000263694 CCDC89Q8N998 374 aa9.95□□□□□ -0.82
SNRNP40-201ENST00000263694 FIBINQ8TAL6 211 aa9.95□□□□□ -0.82
SNRNP40-201ENST00000263694 GRK7Q8WTQ7 553 aa9.95□□□□□ -0.82
SNRNP40-201ENST00000263694 CASKIN2Q8WXE0 1202 aa9.95□□□□□ -0.82
SNRNP40-201ENST00000263694 SLCO2A1Q92959 643 aa9.95□□□□□ -0.82
SNRNP40-201ENST00000263694 OTUB2Q96DC9 234 aa9.95□□□□□ -0.82
SNRNP40-201ENST00000263694 TSGA13Q96PP4 275 aa9.95□□□□□ -0.82
SNRNP40-201ENST00000263694 ERP44Q9BS26 406 aa9.95□□□□□ -0.82
SNRNP40-201ENST00000263694 FEM1AQ9BSK4 669 aa9.95□□□□□ -0.82
SNRNP40-201ENST00000263694 MAGEH1Q9H213 219 aa9.95□□□□□ -0.82
SNRNP40-201ENST00000263694 ECT2Q9H8V3 914 aa9.95□□□□□ -0.82
SNRNP40-201ENST00000263694 ATP13A1Q9HD20 1204 aa9.95□□□□□ -0.82
SNRNP40-201ENST00000263694 THG1LQ9NWX6 298 aaKnown RBP9.95□□□□□ -0.82
SNRNP40-201ENST00000263694 ASIC3Q9UHC3 531 aa9.95□□□□□ -0.82
SNRNP40-201ENST00000263694 INTS6Q9UL03 887 aaKnown RBP9.95□□□□□ -0.82
SNRNP40-201ENST00000263694 OR51B4Q9Y5P0 310 aa9.95□□□□□ -0.82
SNRNP40-201ENST00000263694 TICRRQ7Z2Z1 1910 aa9.95□□□□□ -0.82
SNRNP40-201ENST00000263694 UQCRHLA0A096LP55 91 aa9.94□□□□□ -0.82
SNRNP40-201ENST00000263694 TTC24A2A3L6 582 aaPredicted RBP9.94□□□□□ -0.82
SNRNP40-201ENST00000263694 FAM187AA6NFU0 413 aa9.94□□□□□ -0.82
SNRNP40-201ENST00000263694 BHMG1C9JSJ3 638 aaPredicted RBP9.94□□□□□ -0.82
SNRNP40-201ENST00000263694 ANHXE9PGG2 379 aa9.94□□□□□ -0.82
SNRNP40-201ENST00000263694 ECI2O75521 394 aa9.94□□□□□ -0.82
SNRNP40-201ENST00000263694 GAS8O95995 478 aa9.94□□□□□ -0.82
SNRNP40-201ENST00000263694 PEX11BO96011 259 aa9.94□□□□□ -0.82
SNRNP40-201ENST00000263694 ASGR2P07307 311 aa9.94□□□□□ -0.82
SNRNP40-201ENST00000263694 UQCRHP07919 91 aa9.94□□□□□ -0.82
SNRNP40-201ENST00000263694 CCNB1P14635 433 aa9.94□□□□□ -0.82
SNRNP40-201ENST00000263694 HOXB1P14653 301 aaPredicted RBP9.94□□□□□ -0.82
SNRNP40-201ENST00000263694 IVDP26440 423 aa9.94□□□□□ -0.82
SNRNP40-201ENST00000263694 STIP1P31948 543 aaKnown RBP9.94□□□□□ -0.82
SNRNP40-201ENST00000263694 ADCY8P40145 1251 aa9.94□□□□□ -0.82
SNRNP40-201ENST00000263694 CTSOP43234 321 aaPredicted RBP9.94□□□□□ -0.82
SNRNP40-201ENST00000263694 OXCT1P55809 520 aa9.94□□□□□ -0.82
SNRNP40-201ENST00000263694 LMNB2Q03252 620 aa9.94□□□□□ -0.82
SNRNP40-201ENST00000263694 SLC10A7Q0GE19 358 aa9.94□□□□□ -0.82
SNRNP40-201ENST00000263694 GPS1Q13098 491 aa9.94□□□□□ -0.82
SNRNP40-201ENST00000263694 PARP15Q460N3 678 aa9.94□□□□□ -0.82
SNRNP40-201ENST00000263694 GLE1Q53GS7 698 aaKnown RBP9.94□□□□□ -0.82
SNRNP40-201ENST00000263694 ANKRD20A2Q5SQ80 823 aa9.94□□□□□ -0.82
SNRNP40-201ENST00000263694 MPP7Q5T2T1 576 aa9.94□□□□□ -0.82
SNRNP40-201ENST00000263694 ANKRD20A1Q5TYW2 823 aa9.94□□□□□ -0.82
SNRNP40-201ENST00000263694 ANKRD20A3Q5VUR7 823 aa9.94□□□□□ -0.82
SNRNP40-201ENST00000263694 DUPD1Q68J44 220 aa9.94□□□□□ -0.82
SNRNP40-201ENST00000263694 PTCRAQ6ISU1 281 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms