RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 ACE2Q9BYF1 805 aaPredicted RBP18.31■□□□□ 0.52
TRAF4-201ENST00000262395 VANGL2Q9ULK5 521 aa18.31■□□□□ 0.52
TRAF4-201ENST00000262395 PHF24Q9UPV7 400 aa18.31■□□□□ 0.52
TRAF4-201ENST00000262395 SOCS7O14512 581 aa18.31■□□□□ 0.52
TRAF4-201ENST00000262395 TFEBP19484 476 aa18.31■□□□□ 0.52
TRAF4-201ENST00000262395 PIGGQ5H8A4 983 aa18.31■□□□□ 0.52
TRAF4-201ENST00000262395 C16orf89Q6UX73 402 aa18.31■□□□□ 0.52
TRAF4-201ENST00000262395 GADL1Q6ZQY3 521 aa18.31■□□□□ 0.52
TRAF4-201ENST00000262395 KBTBD7Q8WVZ9 684 aa18.31■□□□□ 0.52
TRAF4-201ENST00000262395 C11orf84Q9BUA3 381 aaPredicted RBP18.31■□□□□ 0.52
TRAF4-201ENST00000262395 SPATC1LQ9H0A9 340 aa18.31■□□□□ 0.52
TRAF4-201ENST00000262395 Q9H521 79 aa18.31■□□□□ 0.52
TRAF4-201ENST00000262395 LIN28AQ9H9Z2 209 aaKnown RBP18.31■□□□□ 0.52
TRAF4-201ENST00000262395 SNTG2Q9NY99 539 aa18.31■□□□□ 0.52
TRAF4-201ENST00000262395 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.31■□□□□ 0.52
TRAF4-201ENST00000262395 ADA2Q9NZK5 511 aa18.31■□□□□ 0.52
TRAF4-201ENST00000262395 KPNA7A9QM74 516 aa18.3■□□□□ 0.52
TRAF4-201ENST00000262395 FAM72CH0Y354 149 aa18.3■□□□□ 0.52
TRAF4-201ENST00000262395 MATN2O00339 956 aa18.3■□□□□ 0.52
TRAF4-201ENST00000262395 HMGB2P26583 209 aaKnown RBP18.3■□□□□ 0.52
TRAF4-201ENST00000262395 GRM3Q14832 879 aa18.3■□□□□ 0.52
TRAF4-201ENST00000262395 FAM72AQ5TYM5 149 aa18.3■□□□□ 0.52
TRAF4-201ENST00000262395 FAM72DQ6L9T8 149 aa18.3■□□□□ 0.52
TRAF4-201ENST00000262395 PLPPR4Q7Z2D5 763 aa18.3■□□□□ 0.52
TRAF4-201ENST00000262395 FAM72BQ86X60 149 aa18.3■□□□□ 0.52
TRAF4-201ENST00000262395 KCTD4Q8WVF5 259 aa18.3■□□□□ 0.52
TRAF4-201ENST00000262395 ATP6V1E2Q96A05 226 aa18.3■□□□□ 0.52
TRAF4-201ENST00000262395 PCDHAC1Q9H158 963 aa18.3■□□□□ 0.52
TRAF4-201ENST00000262395 PPP1R1BQ9UD71 204 aaPredicted RBP18.3■□□□□ 0.52
TRAF4-201ENST00000262395 FZD10Q9ULW2 581 aa18.3■□□□□ 0.52
TRAF4-201ENST00000262395 DOCK1Q14185 1865 aa18.3■□□□□ 0.52
TRAF4-201ENST00000262395 GRID2O43424 1007 aa18.3■□□□□ 0.52
TRAF4-201ENST00000262395 RNASEH2AO75792 299 aaKnown RBP18.3■□□□□ 0.52
TRAF4-201ENST00000262395 NDUFV1P49821 464 aa18.3■□□□□ 0.52
TRAF4-201ENST00000262395 SLC26A9Q7LBE3 791 aa18.3■□□□□ 0.52
TRAF4-201ENST00000262395 SLC2A14Q8TDB8 520 aa18.3■□□□□ 0.52
TRAF4-201ENST00000262395 CENPIQ92674 756 aaPredicted RBP18.3■□□□□ 0.52
TRAF4-201ENST00000262395 ZCWPW2A0A1B0GU75 182 aa18.29■□□□□ 0.52
TRAF4-201ENST00000262395 HDAC3O15379 428 aa18.29■□□□□ 0.52
TRAF4-201ENST00000262395 HDCP19113 662 aa18.29■□□□□ 0.52
TRAF4-201ENST00000262395 ACAT1P24752 427 aaKnown RBP18.29■□□□□ 0.52
TRAF4-201ENST00000262395 PRDX6P30041 224 aa18.29■□□□□ 0.52
TRAF4-201ENST00000262395 RPL14P50914 215 aaKnown RBP18.29■□□□□ 0.52
TRAF4-201ENST00000262395 MPP3Q13368 585 aa18.29■□□□□ 0.52
TRAF4-201ENST00000262395 SPANXN3Q5MJ09 141 aa18.29■□□□□ 0.52
TRAF4-201ENST00000262395 VPS39Q96JC1 886 aa18.29■□□□□ 0.52
TRAF4-201ENST00000262395 ZNF512Q96ME7 567 aaPredicted RBP18.29■□□□□ 0.52
TRAF4-201ENST00000262395 LRRC40Q9H9A6 602 aa18.29■□□□□ 0.52
TRAF4-201ENST00000262395 OXSMQ9NWU1 459 aa18.29■□□□□ 0.52
TRAF4-201ENST00000262395 PTTG2Q9NZH5 202 aa18.29■□□□□ 0.52
TRAF4-201ENST00000262395 MCM3APO60318 1980 aa18.29■□□□□ 0.52
TRAF4-201ENST00000262395 AP1G1O43747 822 aa18.29■□□□□ 0.52
TRAF4-201ENST00000262395 HBP1O60381 514 aa18.29■□□□□ 0.52
TRAF4-201ENST00000262395 FAM200BP0CF97 657 aa18.29■□□□□ 0.52
TRAF4-201ENST00000262395 ZNF286BP0CG31 522 aa18.29■□□□□ 0.52
TRAF4-201ENST00000262395 EN1Q05925 392 aaPredicted RBP18.29■□□□□ 0.52
TRAF4-201ENST00000262395 IL23RQ5VWK5 629 aa18.29■□□□□ 0.52
TRAF4-201ENST00000262395 KCNMB4Q86W47 210 aa18.29■□□□□ 0.52
TRAF4-201ENST00000262395 APBA2Q99767 749 aa18.29■□□□□ 0.52
TRAF4-201ENST00000262395 SMARCAD1Q9H4L7 1026 aa18.29■□□□□ 0.52
TRAF4-201ENST00000262395 BFARQ9NZS9 450 aa18.29■□□□□ 0.52
TRAF4-201ENST00000262395 RUVBL2Q9Y230 463 aaKnown RBP18.29■□□□□ 0.52
TRAF4-201ENST00000262395 NUP205Q92621 2012 aa18.29■□□□□ 0.52
TRAF4-201ENST00000262395 XPO1O14980 1071 aaKnown RBP18.29■□□□□ 0.52
TRAF4-201ENST00000262395 ZBTB24O43167 697 aaPredicted RBP18.29■□□□□ 0.52
TRAF4-201ENST00000262395 FAM58BPP0C7Q3 252 aa18.29■□□□□ 0.52
TRAF4-201ENST00000262395 ADIGQ0VDE8 80 aa18.29■□□□□ 0.52
TRAF4-201ENST00000262395 SYPL2Q5VXT5 272 aa18.29■□□□□ 0.52
TRAF4-201ENST00000262395 GK5Q6ZS86 529 aa18.29■□□□□ 0.52
TRAF4-201ENST00000262395 RPS27LQ71UM5 84 aaKnown RBP18.29■□□□□ 0.52
TRAF4-201ENST00000262395 TMIGD2Q96BF3 282 aa18.29■□□□□ 0.52
TRAF4-201ENST00000262395 SENP6Q9GZR1 1112 aaPredicted RBP18.29■□□□□ 0.52
TRAF4-201ENST00000262395 CLDN5O00501 218 aa18.28■□□□□ 0.52
TRAF4-201ENST00000262395 TNFAIP8O95379 198 aa18.28■□□□□ 0.52
TRAF4-201ENST00000262395 SBK3P0C264 359 aa18.28■□□□□ 0.52
TRAF4-201ENST00000262395 ME2P23368 584 aa18.28■□□□□ 0.52
TRAF4-201ENST00000262395 RPL10P27635 214 aaKnown RBP18.28■□□□□ 0.52
TRAF4-201ENST00000262395 NMBRP28336 390 aa18.28■□□□□ 0.52
TRAF4-201ENST00000262395 PPARGP37231 505 aaPredicted RBP18.28■□□□□ 0.52
TRAF4-201ENST00000262395 CTU1Q7Z7A3 348 aaKnown RBP18.28■□□□□ 0.52
TRAF4-201ENST00000262395 RIOX2Q8IUF8 465 aa18.28■□□□□ 0.52
TRAF4-201ENST00000262395 NAT9Q9BTE0 207 aa18.28■□□□□ 0.52
TRAF4-201ENST00000262395 GJD2Q9UKL4 321 aa18.28■□□□□ 0.52
TRAF4-201ENST00000262395 HACD1B0YJ81 288 aa18.28■□□□□ 0.52
TRAF4-201ENST00000262395 M0QYT0 321 aa18.28■□□□□ 0.52
TRAF4-201ENST00000262395 TSPAN1O60635 241 aa18.28■□□□□ 0.52
TRAF4-201ENST00000262395 RP9Q8TA86 221 aaKnown RBP18.28■□□□□ 0.52
TRAF4-201ENST00000262395 PDCD6IPQ8WUM4 868 aaKnown RBP18.28■□□□□ 0.52
TRAF4-201ENST00000262395 SREK1Q8WXA9 508 aaKnown RBP18.28■□□□□ 0.52
TRAF4-201ENST00000262395 EME1Q96AY2 570 aa18.28■□□□□ 0.52
TRAF4-201ENST00000262395 NDUFA13Q9P0J0 144 aa18.28■□□□□ 0.52
TRAF4-201ENST00000262395 TLK1Q9UKI8 766 aa18.28■□□□□ 0.52
TRAF4-201ENST00000262395 RAB26Q9ULW5 256 aa18.28■□□□□ 0.52
TRAF4-201ENST00000262395 PRPF19Q9UMS4 504 aaKnown RBP18.28■□□□□ 0.52
TRAF4-201ENST00000262395 RAP2CQ9Y3L5 183 aa18.28■□□□□ 0.52
TRAF4-201ENST00000262395 SNX10Q9Y5X0 201 aa18.28■□□□□ 0.52
TRAF4-201ENST00000262395 DNAH12Q6ZR08 3092 aa18.27■□□□□ 0.52
TRAF4-201ENST00000262395 PFDN1O60925 122 aa18.27■□□□□ 0.52
TRAF4-201ENST00000262395 BST2Q10589 180 aaKnown RBP18.27■□□□□ 0.52
TRAF4-201ENST00000262395 RALGDSQ12967 914 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms