RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 GRAP2O75791 330 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 LTA4HP09960 611 aaKnown RBP4.38□□□□□ -1.71
VPS13C-202ENST00000261517 ITGAXP20702 1163 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 HNRNPH1P31943 449 aaKnown RBP4.38□□□□□ -1.71
VPS13C-202ENST00000261517 AP1S1P61966 158 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 ADIGQ0VDE8 80 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 GSTA3Q16772 222 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 ARHGAP17Q68EM7 881 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 RBFAQ8N0V3 343 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 TMA16Q96EY4 203 aaKnown RBP4.38□□□□□ -1.71
VPS13C-202ENST00000261517 ZIM3Q96PE6 472 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 LRCH1Q9Y2L9 728 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 UBDO15205 165 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 ATP5F1P24539 256 aaPredicted RBP4.38□□□□□ -1.71
VPS13C-202ENST00000261517 OR1E1P30953 314 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 NTSP30990 170 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 CCNFP41002 786 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 TUBP50607 506 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 KCNA1Q09470 495 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 CRYMQ14894 314 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 FAM189A2Q15884 450 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 DPY19L1Q2PZI1 675 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 RGMBQ6NW40 437 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 LRRC55Q6ZSA7 311 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 ACOT1Q86TX2 421 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 PROSER1Q86XN7 944 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 FBXO16Q8IX29 292 aaPredicted RBP4.38□□□□□ -1.71
VPS13C-202ENST00000261517 EPS8L1Q8TE68 723 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 NKD2Q969F2 451 aaPredicted RBP4.38□□□□□ -1.71
VPS13C-202ENST00000261517 KCNF1Q9H3M0 494 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 DIABLOQ9NR28 239 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 TMEM39AQ9NV64 488 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 MAFBQ9Y5Q3 323 aaPredicted RBP4.38□□□□□ -1.71
VPS13C-202ENST00000261517 SGPL1O95470 568 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 TRUB2O95900 331 aaKnown RBP4.38□□□□□ -1.71
VPS13C-202ENST00000261517 IL1RL1Q01638 556 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 RCN1Q15293 331 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 SLC24A5Q71RS6 500 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 TAS1R2Q8TE23 839 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 SENP8Q96LD8 212 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 CCDC3Q9BQI4 270 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 SMYD3Q9H7B4 428 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 MIEF1Q9NQG6 463 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 SLC27A6Q9Y2P4 619 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 SNCAIPQ9Y6H5 919 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 IGKV6D-41A0A0C4DH26 115 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 DDTLA6NHG4 134 aaPredicted RBP4.38□□□□□ -1.71
VPS13C-202ENST00000261517 RNF103O00237 685 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 RECQL4O94761 1208 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 TNFAIP8O95379 198 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 SYF2O95926 243 aaKnown RBP4.38□□□□□ -1.71
VPS13C-202ENST00000261517 SMIM10L2AP0DMW4 78 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 SMIM10L2BP0DMW5 78 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 FASP25445 335 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 CHI3L1P36222 383 aaPredicted RBP4.38□□□□□ -1.71
VPS13C-202ENST00000261517 RPP38P78345 283 aaKnown RBP4.38□□□□□ -1.71
VPS13C-202ENST00000261517 DLG1Q12959 904 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 MAMLD1Q13495 774 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 VGLL4Q14135 290 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 BTG3Q14201 252 aaPredicted RBP4.38□□□□□ -1.71
VPS13C-202ENST00000261517 OTOAQ7RTW8 1153 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 FBRSQ9HAH7 460 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 PIGBOS1A0A0B4J2F0 54 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 LACTBL1A8MY62 500 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 NFIBO00712 420 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 SEMA3DO95025 777 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 ZNF24P17028 368 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 WARSP23381 471 aaKnown RBP4.38□□□□□ -1.71
VPS13C-202ENST00000261517 KDELR1P24390 212 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 RGS7P49802 495 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 SNX30Q5VWJ9 437 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 DENND5BQ6ZUT9 1274 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 GPSM1Q86YR5 675 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 DIS3LQ8TF46 1054 aaKnown RBP4.38□□□□□ -1.71
VPS13C-202ENST00000261517 SLCO2A1Q92959 643 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 HAPLN3Q96S86 360 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 GPAMQ9HCL2 828 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 MAN1C1Q9NR34 630 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 BLOC1S4Q9NUP1 217 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 RBM22Q9NW64 420 aaKnown RBP eCLIP4.38□□□□□ -1.71
VPS13C-202ENST00000261517 RSL24D1Q9UHA3 163 aaKnown RBP4.38□□□□□ -1.71
VPS13C-202ENST00000261517 ENTPD4Q9Y227 616 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 PTPRJQ12913 1337 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 FAM86B1E9PN63 330 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 LIN7AO14910 233 aaPredicted RBP4.38□□□□□ -1.71
VPS13C-202ENST00000261517 TCEA3O75764 348 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 ANXA5P08758 320 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 FAM86B2P0C5J1 330 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 UMPSP11172 480 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 PSMC3P17980 439 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 NEK10Q6ZWH5 1172 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 SAMD7Q7Z3H4 446 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 LONP2Q86WA8 852 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 CDC26Q8NHZ8 85 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 ERP27Q96DN0 273 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 SERAC1Q96JX3 654 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 PNMA5Q96PV4 448 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 ACBD6Q9BR61 282 aa4.38□□□□□ -1.71
VPS13C-202ENST00000261517 FDXACB1Q9BRP7 624 aaPredicted RBP4.38□□□□□ -1.71
VPS13C-202ENST00000261517 MAGEH1Q9H213 219 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms