RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 DBN1Q16643 649 aa16.49■□□□□ 0.23
SNCAIP-202ENST00000261368 SPNS2Q8IVW8 549 aa16.49■□□□□ 0.23
SNCAIP-202ENST00000261368 ACVR1CQ8NER5 493 aa16.49■□□□□ 0.23
SNCAIP-202ENST00000261368 MKS1Q9NXB0 559 aa16.49■□□□□ 0.23
SNCAIP-202ENST00000261368 MID2Q9UJV3 735 aa16.49■□□□□ 0.23
SNCAIP-202ENST00000261368 TMEM233B4DJY2 109 aa16.48■□□□□ 0.23
SNCAIP-202ENST00000261368 PFDN1O60925 122 aa16.48■□□□□ 0.23
SNCAIP-202ENST00000261368 RTN3O95197 1032 aaPredicted RBP16.48■□□□□ 0.23
SNCAIP-202ENST00000261368 SLC25A27O95847 323 aa16.48■□□□□ 0.23
SNCAIP-202ENST00000261368 MLNP12872 115 aa16.48■□□□□ 0.23
SNCAIP-202ENST00000261368 HNRNPLP14866 589 aaKnown RBP eCLIP16.48■□□□□ 0.23
SNCAIP-202ENST00000261368 CCNA1P78396 465 aa16.48■□□□□ 0.23
SNCAIP-202ENST00000261368 NIPAL4Q0D2K0 466 aa16.48■□□□□ 0.23
SNCAIP-202ENST00000261368 LAMC2Q13753 1193 aa16.48■□□□□ 0.23
SNCAIP-202ENST00000261368 R3HDM1Q15032 1099 aaKnown RBP16.48■□□□□ 0.23
SNCAIP-202ENST00000261368 KYAT1Q16773 422 aa16.48■□□□□ 0.23
SNCAIP-202ENST00000261368 HFE2Q6ZVN8 426 aa16.48■□□□□ 0.23
SNCAIP-202ENST00000261368 STN1Q9H668 368 aaKnown RBP16.48■□□□□ 0.23
SNCAIP-202ENST00000261368 AP4B1Q9Y6B7 739 aa16.48■□□□□ 0.23
SNCAIP-202ENST00000261368 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.48■□□□□ 0.23
SNCAIP-202ENST00000261368 HDAC3O15379 428 aa16.48■□□□□ 0.23
SNCAIP-202ENST00000261368 TIMM44O43615 452 aa16.48■□□□□ 0.23
SNCAIP-202ENST00000261368 BUD23O43709 281 aaKnown RBP16.48■□□□□ 0.23
SNCAIP-202ENST00000261368 MYL4P12829 197 aa16.48■□□□□ 0.23
SNCAIP-202ENST00000261368 IREB2P48200 963 aaKnown RBP16.48■□□□□ 0.23
SNCAIP-202ENST00000261368 TWF2Q6IBS0 349 aaKnown RBP16.48■□□□□ 0.23
SNCAIP-202ENST00000261368 ARHGAP22Q7Z5H3 698 aa16.48■□□□□ 0.23
SNCAIP-202ENST00000261368 NAT14Q8WUY8 206 aa16.48■□□□□ 0.23
SNCAIP-202ENST00000261368 LZTS1Q9Y250 596 aa16.48■□□□□ 0.23
SNCAIP-202ENST00000261368 RGSL1A5PLK6 1076 aa16.48■□□□□ 0.23
SNCAIP-202ENST00000261368 NMBRP28336 390 aa16.48■□□□□ 0.23
SNCAIP-202ENST00000261368 PTK2BQ14289 1009 aa16.48■□□□□ 0.23
SNCAIP-202ENST00000261368 RNF111Q6ZNA4 994 aa16.48■□□□□ 0.23
SNCAIP-202ENST00000261368 ATG14Q6ZNE5 492 aa16.48■□□□□ 0.23
SNCAIP-202ENST00000261368 ULBP1Q9BZM6 244 aa16.48■□□□□ 0.23
SNCAIP-202ENST00000261368 FAM72CH0Y354 149 aa16.47■□□□□ 0.23
SNCAIP-202ENST00000261368 MOCS2O96007 188 aaPredicted RBP16.47■□□□□ 0.23
SNCAIP-202ENST00000261368 TSPAN8P19075 237 aa16.47■□□□□ 0.23
SNCAIP-202ENST00000261368 TFEBP19484 476 aa16.47■□□□□ 0.23
SNCAIP-202ENST00000261368 TAF6P49848 677 aa16.47■□□□□ 0.23
SNCAIP-202ENST00000261368 LIMK2P53671 638 aa16.47■□□□□ 0.23
SNCAIP-202ENST00000261368 MSLNQ13421 630 aaPredicted RBP16.47■□□□□ 0.23
SNCAIP-202ENST00000261368 PDAP1Q13442 181 aaKnown RBP16.47■□□□□ 0.23
SNCAIP-202ENST00000261368 TUBB3Q13509 450 aa16.47■□□□□ 0.23
SNCAIP-202ENST00000261368 SLC25A52Q3SY17 297 aa16.47■□□□□ 0.23
SNCAIP-202ENST00000261368 FAM72AQ5TYM5 149 aa16.47■□□□□ 0.23
SNCAIP-202ENST00000261368 C9orf57Q5W0N0 161 aa16.47■□□□□ 0.23
SNCAIP-202ENST00000261368 FAM72DQ6L9T8 149 aa16.47■□□□□ 0.23
SNCAIP-202ENST00000261368 FAM72BQ86X60 149 aa16.47■□□□□ 0.23
SNCAIP-202ENST00000261368 OPTNQ96CV9 577 aa16.47■□□□□ 0.23
SNCAIP-202ENST00000261368 SUDS3Q9H7L9 328 aaPredicted RBP16.47■□□□□ 0.23
SNCAIP-202ENST00000261368 CAAP1Q9H8G2 361 aa16.47■□□□□ 0.23
SNCAIP-202ENST00000261368 EFCAB1Q9HAE3 211 aa16.47■□□□□ 0.23
SNCAIP-202ENST00000261368 XPR1Q9UBH6 696 aa16.47■□□□□ 0.23
SNCAIP-202ENST00000261368 FZD10Q9ULW2 581 aa16.47■□□□□ 0.23
SNCAIP-202ENST00000261368 SNX13Q9Y5W8 968 aa16.47■□□□□ 0.23
SNCAIP-202ENST00000261368 SF3B1O75533 1304 aaKnown RBP eCLIP16.47■□□□□ 0.23
SNCAIP-202ENST00000261368 TPST1O60507 370 aa16.47■□□□□ 0.23
SNCAIP-202ENST00000261368 USP17L7P0C7H9 530 aa16.47■□□□□ 0.23
SNCAIP-202ENST00000261368 ARL13BQ3SXY8 428 aa16.47■□□□□ 0.23
SNCAIP-202ENST00000261368 LRRC8EQ6NSJ5 796 aa16.47■□□□□ 0.23
SNCAIP-202ENST00000261368 AEBP2Q6ZN18 517 aaPredicted RBP16.47■□□□□ 0.23
SNCAIP-202ENST00000261368 OTOP3Q7RTS5 596 aa16.47■□□□□ 0.23
SNCAIP-202ENST00000261368 RTKNQ9BST9 563 aa16.47■□□□□ 0.23
SNCAIP-202ENST00000261368 MRPL1Q9BYD6 325 aaKnown RBP16.47■□□□□ 0.23
SNCAIP-202ENST00000261368 CCDC167Q9P0B6 97 aa16.47■□□□□ 0.23
SNCAIP-202ENST00000261368 DNAJB4Q9UDY4 337 aa16.47■□□□□ 0.23
SNCAIP-202ENST00000261368 UBQLN1Q9UMX0 589 aaKnown RBP16.47■□□□□ 0.23
SNCAIP-202ENST00000261368 PSMD13Q9UNM6 376 aa16.47■□□□□ 0.23
SNCAIP-202ENST00000261368 ASB14A6NK59 587 aa16.47■□□□□ 0.23
SNCAIP-202ENST00000261368 ITPRIPL1Q6GPH6 555 aa16.47■□□□□ 0.23
SNCAIP-202ENST00000261368 PHF21BQ96EK2 531 aa16.47■□□□□ 0.23
SNCAIP-202ENST00000261368 ZNF560Q96MR9 790 aa16.47■□□□□ 0.23
SNCAIP-202ENST00000261368 PIGVQ9NUD9 493 aa16.47■□□□□ 0.23
SNCAIP-202ENST00000261368 ME2P23368 584 aa16.46■□□□□ 0.23
SNCAIP-202ENST00000261368 PTPN3P26045 913 aa16.46■□□□□ 0.23
SNCAIP-202ENST00000261368 MAGEA3P43357 314 aa16.46■□□□□ 0.23
SNCAIP-202ENST00000261368 TMED1Q13445 227 aa16.46■□□□□ 0.23
SNCAIP-202ENST00000261368 CSHL1Q14406 222 aa16.46■□□□□ 0.23
SNCAIP-202ENST00000261368 PAN2Q504Q3 1202 aaKnown RBP16.46■□□□□ 0.23
SNCAIP-202ENST00000261368 NOTUMQ6P988 496 aa16.46■□□□□ 0.23
SNCAIP-202ENST00000261368 SLC27A1Q6PCB7 646 aa16.46■□□□□ 0.23
SNCAIP-202ENST00000261368 SPATA22Q8NHS9 363 aa16.46■□□□□ 0.23
SNCAIP-202ENST00000261368 FSD1LQ9BXM9 530 aa16.46■□□□□ 0.23
SNCAIP-202ENST00000261368 ACOT9Q9Y305 439 aa16.46■□□□□ 0.23
SNCAIP-202ENST00000261368 NUP205Q92621 2012 aa16.46■□□□□ 0.23
SNCAIP-202ENST00000261368 SEC24DO94855 1032 aaPredicted RBP16.46■□□□□ 0.23
SNCAIP-202ENST00000261368 GSRP00390 522 aa16.46■□□□□ 0.23
SNCAIP-202ENST00000261368 MPOP05164 745 aa16.46■□□□□ 0.23
SNCAIP-202ENST00000261368 TKTP29401 623 aaKnown RBP16.46■□□□□ 0.23
SNCAIP-202ENST00000261368 GRM5P41594 1212 aa16.46■□□□□ 0.23
SNCAIP-202ENST00000261368 MAGEA6P43360 314 aa16.46■□□□□ 0.23
SNCAIP-202ENST00000261368 RPS6KA3P51812 740 aa16.46■□□□□ 0.23
SNCAIP-202ENST00000261368 TLR1Q15399 786 aa16.46■□□□□ 0.23
SNCAIP-202ENST00000261368 INSCQ1MX18 579 aa16.46■□□□□ 0.23
SNCAIP-202ENST00000261368 WSCD1Q658N2 575 aa16.46■□□□□ 0.23
SNCAIP-202ENST00000261368 PAOXQ6QHF9 649 aa16.46■□□□□ 0.23
SNCAIP-202ENST00000261368 GK5Q6ZS86 529 aa16.46■□□□□ 0.23
SNCAIP-202ENST00000261368 RPS27LQ71UM5 84 aaKnown RBP16.46■□□□□ 0.23
SNCAIP-202ENST00000261368 WNT8BQ93098 351 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms