RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 DUSP10Q9Y6W6 482 aa4.11□□□□□ -1.75
RNF38-201ENST00000259605 H0YJX3 145 aa4.11□□□□□ -1.75
RNF38-201ENST00000259605 RGS5O15539 181 aa4.11□□□□□ -1.75
RNF38-201ENST00000259605 DFNA5O60443 496 aa4.11□□□□□ -1.75
RNF38-201ENST00000259605 BAG2O95816 211 aa4.11□□□□□ -1.75
RNF38-201ENST00000259605 LPLP06858 475 aa4.11□□□□□ -1.75
RNF38-201ENST00000259605 PAEPP09466 180 aa4.11□□□□□ -1.75
RNF38-201ENST00000259605 SLC35G6P0C7Q6 338 aa4.11□□□□□ -1.75
RNF38-201ENST00000259605 RARGP13631 454 aa4.11□□□□□ -1.75
RNF38-201ENST00000259605 RPA1P27694 616 aa4.11□□□□□ -1.75
RNF38-201ENST00000259605 POU1F1P28069 291 aa4.11□□□□□ -1.75
RNF38-201ENST00000259605 MLH1P40692 756 aa4.11□□□□□ -1.75
RNF38-201ENST00000259605 PURAQ00577 322 aaKnown RBP4.11□□□□□ -1.75
RNF38-201ENST00000259605 KRR1Q13601 381 aaKnown RBP4.11□□□□□ -1.75
RNF38-201ENST00000259605 DSG2Q14126 1118 aa4.11□□□□□ -1.75
RNF38-201ENST00000259605 PTGES3Q15185 160 aaKnown RBP4.11□□□□□ -1.75
RNF38-201ENST00000259605 LY6KQ17RY6 165 aa4.11□□□□□ -1.75
RNF38-201ENST00000259605 EPC2Q52LR7 807 aa4.11□□□□□ -1.75
RNF38-201ENST00000259605 HECTD2Q5U5R9 776 aa4.11□□□□□ -1.75
RNF38-201ENST00000259605 ANO7Q6IWH7 933 aa4.11□□□□□ -1.75
RNF38-201ENST00000259605 FUT10Q6P4F1 479 aa4.11□□□□□ -1.75
RNF38-201ENST00000259605 RPTNQ6XPR3 784 aa4.11□□□□□ -1.75
RNF38-201ENST00000259605 RINLQ6ZS11 566 aa4.11□□□□□ -1.75
RNF38-201ENST00000259605 VN1R5Q7Z5H4 357 aa4.11□□□□□ -1.75
RNF38-201ENST00000259605 R3HCC1LQ7Z5L2 792 aaKnown RBP4.11□□□□□ -1.75
RNF38-201ENST00000259605 FGD2Q7Z6J4 655 aa4.11□□□□□ -1.75
RNF38-201ENST00000259605 EXOC3L1Q86VI1 746 aa4.11□□□□□ -1.75
RNF38-201ENST00000259605 METTL16Q86W50 562 aaKnown RBP4.11□□□□□ -1.75
RNF38-201ENST00000259605 TTLQ8NG68 377 aa4.11□□□□□ -1.75
RNF38-201ENST00000259605 GOT1L1Q8NHS2 421 aaPredicted RBP4.11□□□□□ -1.75
RNF38-201ENST00000259605 MAP4K1Q92918 833 aa4.11□□□□□ -1.75
RNF38-201ENST00000259605 NAT6Q93015 286 aa4.11□□□□□ -1.75
RNF38-201ENST00000259605 PRICKLE1Q96MT3 831 aaPredicted RBP4.11□□□□□ -1.75
RNF38-201ENST00000259605 VAT1Q99536 393 aa4.11□□□□□ -1.75
RNF38-201ENST00000259605 MAP3K3Q99759 626 aa4.11□□□□□ -1.75
RNF38-201ENST00000259605 MLPHQ9BV36 600 aaPredicted RBP4.11□□□□□ -1.75
RNF38-201ENST00000259605 FAM192AQ9GZU8 254 aa4.11□□□□□ -1.75
RNF38-201ENST00000259605 PCBD2Q9H0N5 130 aa4.11□□□□□ -1.75
RNF38-201ENST00000259605 OPA3Q9H6K4 179 aa4.11□□□□□ -1.75
RNF38-201ENST00000259605 TIGARQ9NQ88 270 aa4.11□□□□□ -1.75
RNF38-201ENST00000259605 ACSS2Q9NR19 701 aa4.11□□□□□ -1.75
RNF38-201ENST00000259605 FAM105AQ9NUU6 356 aa4.11□□□□□ -1.75
RNF38-201ENST00000259605 FBXO28Q9NVF7 368 aa4.11□□□□□ -1.75
RNF38-201ENST00000259605 PPARGC1AQ9UBK2 798 aaKnown RBP4.11□□□□□ -1.75
RNF38-201ENST00000259605 CTNNAL1Q9UBT7 734 aa4.11□□□□□ -1.75
RNF38-201ENST00000259605 PRKAG3Q9UGI9 489 aa4.11□□□□□ -1.75
RNF38-201ENST00000259605 CAPN11Q9UMQ6 739 aa4.11□□□□□ -1.75
RNF38-201ENST00000259605 NEDD4P46934 1319 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 HYKKA2RU49 373 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 OR5K4A6NMS3 321 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 FAM220BPB1ANY3 271 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 PRR23D1E9PI22 279 aaPredicted RBP4.1□□□□□ -1.75
RNF38-201ENST00000259605 RTN2O75298 545 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 CLDN11O75508 207 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 HLA-DQA2P01906 255 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 PRR23D2P0DMB1 279 aaPredicted RBP4.1□□□□□ -1.75
RNF38-201ENST00000259605 CDK4P11802 303 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 IRF2P14316 349 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 DRD4P21917 467 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 TUBP50607 506 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 STK4Q13043 487 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 TIGD6Q17RP2 521 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 VPS26BQ4G0F5 336 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 SGO1Q5FBB7 561 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 VWA2Q5GFL6 755 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 LYSMD4Q5XG99 296 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 PTCRAQ6ISU1 281 aaPredicted RBP4.1□□□□□ -1.75
RNF38-201ENST00000259605 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.1□□□□□ -1.75
RNF38-201ENST00000259605 LSMEM2Q8N112 164 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 LMX1AQ8TE12 382 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 RNF25Q96BH1 459 aaPredicted RBP4.1□□□□□ -1.75
RNF38-201ENST00000259605 ZNF514Q96K75 400 aaPredicted RBP4.1□□□□□ -1.75
RNF38-201ENST00000259605 PSMB7Q99436 277 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 CDC6Q99741 560 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 TMBIM4Q9HC24 238 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 SAYSD1Q9NPB0 183 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 NT5MQ9NPB1 228 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 SPATS2LQ9NUQ6 558 aaKnown RBP4.1□□□□□ -1.75
RNF38-201ENST00000259605 IMP3Q9NV31 184 aaKnown RBP4.1□□□□□ -1.75
RNF38-201ENST00000259605 TBX20Q9UMR3 447 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 MFHAS1Q9Y4C4 1052 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 CCDC162PA2VCL2 907 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 TP53I11O14683 189 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 MAGEB3O15480 346 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 CTIFO43310 598 aaKnown RBP4.1□□□□□ -1.75
RNF38-201ENST00000259605 RECQL4O94761 1208 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 PLEKHA8P1O95397 391 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 APBB3O95704 486 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 RBP1P09455 135 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 ACADLP28330 430 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 TPP2P29144 1249 aaPredicted RBP4.1□□□□□ -1.75
RNF38-201ENST00000259605 SOX6P35712 828 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 PEX19P40855 299 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 BUD31P41223 144 aaPredicted RBP4.1□□□□□ -1.75
RNF38-201ENST00000259605 HNRNPKP61978 463 aaKnown RBP eCLIP4.1□□□□□ -1.75
RNF38-201ENST00000259605 RUNX1T1Q06455 604 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.1□□□□□ -1.75
RNF38-201ENST00000259605 ZBTB17Q13105 803 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 RCN1Q15293 331 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 RABL6Q3YEC7 729 aaPredicted RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms