RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 MED24O75448 989 aa4.88□□□□□ -1.63
RC3H1-201ENST00000258349 CYP1A1P04798 512 aaPredicted RBP4.88□□□□□ -1.63
RC3H1-201ENST00000258349 SLC26A3P40879 764 aa4.88□□□□□ -1.63
RC3H1-201ENST00000258349 RAB25P57735 213 aa4.88□□□□□ -1.63
RC3H1-201ENST00000258349 CDC42P60953 191 aa4.88□□□□□ -1.63
RC3H1-201ENST00000258349 PTPN11Q06124 597 aaPredicted RBP4.88□□□□□ -1.63
RC3H1-201ENST00000258349 LAMTOR4Q0VGL1 99 aa4.88□□□□□ -1.63
RC3H1-201ENST00000258349 TBX2Q13207 712 aaPredicted RBP4.88□□□□□ -1.63
RC3H1-201ENST00000258349 SLC15A2Q16348 729 aa4.88□□□□□ -1.63
RC3H1-201ENST00000258349 PYDC2Q56P42 97 aa4.88□□□□□ -1.63
RC3H1-201ENST00000258349 INTS11Q5TA45 600 aaKnown RBP4.88□□□□□ -1.63
RC3H1-201ENST00000258349 KIAA0895Q8NCT3 520 aa4.88□□□□□ -1.63
RC3H1-201ENST00000258349 USP7Q93009 1102 aa4.88□□□□□ -1.63
RC3H1-201ENST00000258349 PPP1R14AQ96A00 147 aa4.88□□□□□ -1.63
RC3H1-201ENST00000258349 PLGRKTQ9HBL7 147 aa4.88□□□□□ -1.63
RC3H1-201ENST00000258349 COMMD9Q9P000 198 aa4.88□□□□□ -1.63
RC3H1-201ENST00000258349 VPS51Q9UID3 782 aa4.88□□□□□ -1.63
RC3H1-201ENST00000258349 INVSQ9Y283 1065 aa4.88□□□□□ -1.63
RC3H1-201ENST00000258349 COL14A1Q05707 1796 aaKnown RBP4.88□□□□□ -1.63
RC3H1-201ENST00000258349 GUCY1B2O75343 617 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 MLYCDO95822 493 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 RRM1P23921 792 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 HIRAP54198 1017 aaPredicted RBP4.87□□□□□ -1.63
RC3H1-201ENST00000258349 SREBF2Q12772 1141 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 INSCQ1MX18 579 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 TMEM119Q4V9L6 283 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 LIN54Q6MZP7 749 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 ZNF671Q8TAW3 534 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 FAM81AQ8TBF8 368 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 SYNDIG1Q9H7V2 258 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 CLK4Q9HAZ1 481 aaKnown RBP4.87□□□□□ -1.63
RC3H1-201ENST00000258349 XPNPEP3Q9NQH7 507 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 VPS28Q9UK41 221 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 ENTPD4Q9Y227 616 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 CNTNAP4Q9C0A0 1308 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 DCXO43602 365 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 SYNCRIPO60506 623 aaKnown RBP4.87□□□□□ -1.63
RC3H1-201ENST00000258349 SERPINF2P08697 491 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 CETPP11597 493 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 TCF4P15884 667 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 DSG3P32926 999 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 OR1G1P47890 313 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 ITGADQ13349 1161 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 DDX39BQ13838 428 aaKnown RBP4.87□□□□□ -1.63
RC3H1-201ENST00000258349 COMMD2Q86X83 199 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 SPATA5L1Q9BVQ7 753 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 C5P01031 1676 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 CARNS1A5YM72 827 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 CCNT2O60583 730 aaKnown RBP4.87□□□□□ -1.63
RC3H1-201ENST00000258349 SEC24AO95486 1093 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 CYP2A6P11509 494 aaPredicted RBP4.87□□□□□ -1.63
RC3H1-201ENST00000258349 IDO1P14902 403 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 PLIN5Q00G26 463 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 HSF2Q03933 536 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 QPRTQ15274 297 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 TCEAL5Q5H9L2 206 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 MACC1Q6ZN28 852 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 SLC44A2Q8IWA5 706 aaPredicted RBP4.87□□□□□ -1.63
RC3H1-201ENST00000258349 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.87□□□□□ -1.63
RC3H1-201ENST00000258349 RXFP2Q8WXD0 754 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 VAT1Q99536 393 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 CBWD1Q9BRT8 395 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 PXMP2Q9NR77 195 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 PNMA8BQ9ULN7 279 aaPredicted RBP4.87□□□□□ -1.63
RC3H1-201ENST00000258349 WBP11Q9Y2W2 641 aaKnown RBP4.87□□□□□ -1.63
RC3H1-201ENST00000258349 FRMPD4Q14CM0 1322 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 UBE2QL1A1L167 161 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 PTGES3LE9PB15 166 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 KPNA6O60684 536 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 AKAP3O75969 853 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 OR6B1O95007 311 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 LTFP02788 710 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 CYP1A2P05177 515 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 THP07101 528 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 CSF1RP07333 972 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 PSMD4P55036 377 aaKnown RBP4.87□□□□□ -1.63
RC3H1-201ENST00000258349 ZNF268Q14587 947 aaPredicted RBP4.87□□□□□ -1.63
RC3H1-201ENST00000258349 PAGE2BQ5JRK9 111 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 EIF3MQ7L2H7 374 aaKnown RBP4.87□□□□□ -1.63
RC3H1-201ENST00000258349 SNX32Q86XE0 403 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 PROSER1Q86XN7 944 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 CREG2Q8IUH2 290 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 PTCD3Q96EY7 689 aaKnown RBP4.87□□□□□ -1.63
RC3H1-201ENST00000258349 PLEKHG4BQ96PX9 1271 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 EHD4Q9H223 541 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 SEMA4AQ9H3S1 761 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 ELP3Q9H9T3 547 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 OSGEPQ9NPF4 335 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 CCDC162PA2VCL2 907 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 SGTAO43765 313 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 PBLDP30039 288 aaPredicted RBP4.87□□□□□ -1.63
RC3H1-201ENST00000258349 USP49Q70CQ1 688 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 LZTR1Q8N653 840 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 RPRD1AQ96P16 312 aaPredicted RBP4.87□□□□□ -1.63
RC3H1-201ENST00000258349 BBS4Q96RK4 519 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 RACGAP1Q9H0H5 632 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 LRRC4BQ9NT99 713 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 CCDC59Q9P031 241 aaKnown RBP4.87□□□□□ -1.63
RC3H1-201ENST00000258349 ATXN10Q9UBB4 475 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 ZNF70Q9UC06 446 aaPredicted RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms