RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 HPDLQ96IR7 371 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 RNF145Q96MT1 663 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 OSBPL11Q9BXB4 747 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 FRMD8Q9BZ67 464 aaPredicted RBP12.54□□□□□ -0.4
USP30-201ENST00000257548 TUT1Q9H6E5 874 aaKnown RBP12.54□□□□□ -0.4
USP30-201ENST00000257548 CROTQ9UKG9 612 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 DSEQ9UL01 958 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 FASP25445 335 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 CTBP1Q13363 440 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 CAPRIN1Q14444 709 aaKnown RBP12.54□□□□□ -0.4
USP30-201ENST00000257548 RNF111Q6ZNA4 994 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 PRR23BQ6ZRT6 265 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 TMEM110Q86TL2 294 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 STK32CQ86UX6 486 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 SP8Q8IXZ3 490 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.54□□□□□ -0.4
USP30-201ENST00000257548 HTRA1Q92743 480 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 BORCS5Q969J3 196 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 WDR83Q9BRX9 315 aaKnown RBP12.54□□□□□ -0.4
USP30-201ENST00000257548 ZNF518BQ9C0D4 1074 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 EPS8L2Q9H6S3 715 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 VANGL2Q9ULK5 521 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 ST14Q9Y5Y6 855 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 CCDC88AQ3V6T2 1871 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 GSTA4O15217 222 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 PMPCBO75439 489 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 MFN2O95140 757 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 APBA3O96018 575 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 ICAM1P05362 532 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 MYL4P12829 197 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 STAT5BP51692 787 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 NDST2P52849 883 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 CDH13P55290 713 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 SNX16P57768 344 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 PRKAA1Q13131 559 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 MBLAC2Q68D91 279 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 TMEM53Q6P2H8 277 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 SIX5Q8N196 739 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 RP9Q8TA86 221 aaKnown RBP12.54□□□□□ -0.4
USP30-201ENST00000257548 CANT1Q8WVQ1 401 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 EMID1Q96A84 441 aaPredicted RBP12.54□□□□□ -0.4
USP30-201ENST00000257548 TUBGCP3Q96CW5 907 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 RPL10LQ96L21 214 aaKnown RBP12.54□□□□□ -0.4
USP30-201ENST00000257548 DACH2Q96NX9 599 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 C1orf21Q9H246 121 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 RPAP3Q9H6T3 665 aaPredicted RBP12.54□□□□□ -0.4
USP30-201ENST00000257548 PCDHA11Q9Y5I1 949 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 DNAH12Q6ZR08 3092 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 ASS1P00966 412 aaKnown RBP12.53□□□□□ -0.4
USP30-201ENST00000257548 DHRS4L1P0CG22 281 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 FGF3P11487 239 aaPredicted RBP12.53□□□□□ -0.4
USP30-201ENST00000257548 GOT1P17174 413 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 NDST1P52848 882 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 FBXO48Q5FWF7 155 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 CCDC103Q8IW40 242 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 OR9I1Q8NGQ6 314 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 RIN3Q8TB24 985 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 PLEKHA8Q96JA3 519 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 ZDHHC15Q96MV8 337 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 MARCH7Q9H992 704 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 MRPL40Q9NQ50 206 aaKnown RBP12.53□□□□□ -0.4
USP30-201ENST00000257548 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.53□□□□□ -0.4
USP30-201ENST00000257548 XPR1Q9UBH6 696 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 SFMBT1Q9UHJ3 866 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 VPS51Q9UID3 782 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 ACOT9Q9Y305 439 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 BCORQ6W2J9 1755 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 DOCK2Q92608 1830 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 KLF11O14901 512 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 ACO1P21399 889 aaKnown RBP12.53□□□□□ -0.4
USP30-201ENST00000257548 JAK1P23458 1154 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 CPOXP36551 454 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 GSSP48637 474 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 NSUN2Q08J23 767 aaKnown RBP eCLIP12.53□□□□□ -0.4
USP30-201ENST00000257548 PPP1R8Q12972 351 aaKnown RBP12.53□□□□□ -0.4
USP30-201ENST00000257548 LAMC2Q13753 1193 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 FGD3Q5JSP0 725 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 TMC5Q6UXY8 1006 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 FAM183BPQ6ZVS7 135 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 KBTBD6Q86V97 674 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 CAND1Q86VP6 1230 aaKnown RBP12.53□□□□□ -0.4
USP30-201ENST00000257548 PCYOX1LQ8NBM8 494 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 KIF12Q96FN5 646 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 TMEM176AQ96HP8 235 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 SPATA17Q96L03 361 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 ATAD3AQ9NVI7 634 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 PHLPP1O60346 1717 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 TIAM2Q8IVF5 1701 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 A8MU76 341 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 DFFAO00273 331 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 MATN2O00339 956 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 TRIM38O00635 465 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 ALDOAP04075 364 aaKnown RBP12.53□□□□□ -0.4
USP30-201ENST00000257548 CCNA2P20248 432 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 SULT1E1P49888 294 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 PCLAFQ15004 111 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 POLD3Q15054 466 aaPredicted RBP12.53□□□□□ -0.4
USP30-201ENST00000257548 MAPRE2Q15555 327 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 SNX29P2Q8IUI4 249 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 MICU2Q8IYU8 434 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms