RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 CAPN10Q9HC96 672 aa23.53■■□□□ 1.36
LSM4-201ENST00000252816 NDFIP2Q9NV92 336 aa23.53■■□□□ 1.36
LSM4-201ENST00000252816 FBXL12Q9NXK8 326 aa23.53■■□□□ 1.36
LSM4-201ENST00000252816 SCML1Q9UN30 329 aa23.53■■□□□ 1.36
LSM4-201ENST00000252816 HS3ST2Q9Y278 367 aa23.53■■□□□ 1.36
LSM4-201ENST00000252816 C4orf47A7E2U8 309 aa23.52■■□□□ 1.36
LSM4-201ENST00000252816 MEI4A8MW99 385 aa23.52■■□□□ 1.36
LSM4-201ENST00000252816 K7ERQ8 282 aa23.52■■□□□ 1.36
LSM4-201ENST00000252816 CDX4O14627 284 aaPredicted RBP23.52■■□□□ 1.36
LSM4-201ENST00000252816 TM4SF5O14894 197 aa23.52■■□□□ 1.36
LSM4-201ENST00000252816 SRCP12931 536 aa23.52■■□□□ 1.36
LSM4-201ENST00000252816 SLC8A1P32418 973 aa23.52■■□□□ 1.36
LSM4-201ENST00000252816 PSMD8P48556 350 aa23.52■■□□□ 1.36
LSM4-201ENST00000252816 KRT83P78385 493 aa23.52■■□□□ 1.36
LSM4-201ENST00000252816 ELAVL3Q14576 367 aaKnown RBP23.52■■□□□ 1.36
LSM4-201ENST00000252816 TDRD12Q587J7 1177 aaKnown RBP23.52■■□□□ 1.36
LSM4-201ENST00000252816 WDR45BQ5MNZ6 344 aa23.52■■□□□ 1.36
LSM4-201ENST00000252816 LINGO4Q6UY18 593 aa23.52■■□□□ 1.36
LSM4-201ENST00000252816 ZNF783Q6ZMS7 281 aa23.52■■□□□ 1.36
LSM4-201ENST00000252816 USP30Q70CQ3 517 aa23.52■■□□□ 1.36
LSM4-201ENST00000252816 TMC6Q7Z403 805 aa23.52■■□□□ 1.36
LSM4-201ENST00000252816 CEP76Q8TAP6 659 aa23.52■■□□□ 1.36
LSM4-201ENST00000252816 NUSAP1Q9BXS6 441 aaKnown RBP23.52■■□□□ 1.36
LSM4-201ENST00000252816 TRIM7Q9C029 511 aa23.52■■□□□ 1.36
LSM4-201ENST00000252816 SPTBN2O15020 2390 aa23.52■■□□□ 1.36
LSM4-201ENST00000252816 A0A1W2PP55 124 aa23.51■■□□□ 1.35
LSM4-201ENST00000252816 SEMA4FO95754 770 aa23.51■■□□□ 1.35
LSM4-201ENST00000252816 SERPINF2P08697 491 aa23.51■■□□□ 1.35
LSM4-201ENST00000252816 RHOQP17081 205 aa23.51■■□□□ 1.35
LSM4-201ENST00000252816 ENGP17813 658 aa23.51■■□□□ 1.35
LSM4-201ENST00000252816 GNA12Q03113 381 aa23.51■■□□□ 1.35
LSM4-201ENST00000252816 ZNF252P-AS1Q0IIN9 211 aa23.51■■□□□ 1.35
LSM4-201ENST00000252816 Q6ZVU0 165 aa23.51■■□□□ 1.35
LSM4-201ENST00000252816 AADATQ8N5Z0 425 aa23.51■■□□□ 1.35
LSM4-201ENST00000252816 GANCQ8TET4 914 aa23.51■■□□□ 1.35
LSM4-201ENST00000252816 TBC1D31Q96DN5 1066 aa23.51■■□□□ 1.35
LSM4-201ENST00000252816 IQCDQ96DY2 449 aa23.51■■□□□ 1.35
LSM4-201ENST00000252816 SPON2Q9BUD6 331 aa23.51■■□□□ 1.35
LSM4-201ENST00000252816 ISCUQ9H1K1 167 aa23.51■■□□□ 1.35
LSM4-201ENST00000252816 PCED1AQ9H1Q7 454 aa23.51■■□□□ 1.35
LSM4-201ENST00000252816 SGK2Q9HBY8 427 aa23.51■■□□□ 1.35
LSM4-201ENST00000252816 CNOT8Q9UFF9 292 aaKnown RBP23.51■■□□□ 1.35
LSM4-201ENST00000252816 ADAMTS1Q9UHI8 967 aa23.51■■□□□ 1.35
LSM4-201ENST00000252816 FZD10Q9ULW2 581 aa23.51■■□□□ 1.35
LSM4-201ENST00000252816 SLC6A14Q9UN76 642 aa23.51■■□□□ 1.35
LSM4-201ENST00000252816 LUC7L2Q9Y383 392 aaKnown RBP23.51■■□□□ 1.35
LSM4-201ENST00000252816 BZW2Q9Y6E2 419 aaKnown RBP23.51■■□□□ 1.35
LSM4-201ENST00000252816 NYNRINQ9P2P1 1898 aaKnown RBP23.5■■□□□ 1.35
LSM4-201ENST00000252816 TMEM191CA6NGB0 347 aa23.5■■□□□ 1.35
LSM4-201ENST00000252816 SMAD6O43541 496 aaKnown RBP23.5■■□□□ 1.35
LSM4-201ENST00000252816 ZMPSTE24O75844 475 aa23.5■■□□□ 1.35
LSM4-201ENST00000252816 IL1BP01584 269 aa23.5■■□□□ 1.35
LSM4-201ENST00000252816 SERPING1P05155 500 aa23.5■■□□□ 1.35
LSM4-201ENST00000252816 PSMA2P25787 234 aa23.5■■□□□ 1.35
LSM4-201ENST00000252816 L1CAMP32004 1257 aa23.5■■□□□ 1.35
LSM4-201ENST00000252816 METAP1P53582 386 aa23.5■■□□□ 1.35
LSM4-201ENST00000252816 EFHC2Q5JST6 749 aa23.5■■□□□ 1.35
LSM4-201ENST00000252816 IL31Q6EBC2 164 aa23.5■■□□□ 1.35
LSM4-201ENST00000252816 RABEPKQ7Z6M1 372 aa23.5■■□□□ 1.35
LSM4-201ENST00000252816 ARFGAP1Q8N6T3 406 aa23.5■■□□□ 1.35
LSM4-201ENST00000252816 ATP11CQ8NB49 1132 aa23.5■■□□□ 1.35
LSM4-201ENST00000252816 RNF214Q8ND24 703 aa23.5■■□□□ 1.35
LSM4-201ENST00000252816 ZNF653Q96CK0 615 aa23.5■■□□□ 1.35
LSM4-201ENST00000252816 NEUROG2Q9H2A3 272 aa23.5■■□□□ 1.35
LSM4-201ENST00000252816 TMEM9BQ9NQ34 198 aa23.5■■□□□ 1.35
LSM4-201ENST00000252816 TMEM248Q9NWD8 314 aa23.5■■□□□ 1.35
LSM4-201ENST00000252816 SARDHQ9UL12 918 aa23.5■■□□□ 1.35
LSM4-201ENST00000252816 NCKAP1Q9Y2A7 1128 aa23.5■■□□□ 1.35
LSM4-201ENST00000252816 CBX4O00257 560 aa23.49■■□□□ 1.35
LSM4-201ENST00000252816 RNASEH2AO75792 299 aaKnown RBP23.49■■□□□ 1.35
LSM4-201ENST00000252816 C5AR1P21730 350 aa23.49■■□□□ 1.35
LSM4-201ENST00000252816 CASP14P31944 242 aa23.49■■□□□ 1.35
LSM4-201ENST00000252816 ACVRL1P37023 503 aa23.49■■□□□ 1.35
LSM4-201ENST00000252816 HDDC3Q8N4P3 179 aa23.49■■□□□ 1.35
LSM4-201ENST00000252816 ZCCHC9Q8N567 271 aaKnown RBP23.49■■□□□ 1.35
LSM4-201ENST00000252816 C1orf216Q8TAB5 229 aa23.49■■□□□ 1.35
LSM4-201ENST00000252816 OR8D1Q8WZ84 308 aa23.49■■□□□ 1.35
LSM4-201ENST00000252816 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.49■■□□□ 1.35
LSM4-201ENST00000252816 ACE2Q9BYF1 805 aaPredicted RBP23.49■■□□□ 1.35
LSM4-201ENST00000252816 MIR1-1HGQ9H1L0 117 aa23.49■■□□□ 1.35
LSM4-201ENST00000252816 ATP13A1Q9HD20 1204 aa23.49■■□□□ 1.35
LSM4-201ENST00000252816 EIF2B4Q9UI10 523 aaKnown RBP23.49■■□□□ 1.35
LSM4-201ENST00000252816 DNAI1Q9UI46 699 aa23.49■■□□□ 1.35
LSM4-201ENST00000252816 ZBTB32Q9Y2Y4 487 aaPredicted RBP23.49■■□□□ 1.35
LSM4-201ENST00000252816 SLCO1B1Q9Y6L6 691 aa23.49■■□□□ 1.35
LSM4-201ENST00000252816 CNOT1A5YKK6 2376 aaKnown RBP23.48■■□□□ 1.35
LSM4-201ENST00000252816 MCF2LO15068 1137 aa23.48■■□□□ 1.35
LSM4-201ENST00000252816 BNIP3LO60238 219 aa23.48■■□□□ 1.35
LSM4-201ENST00000252816 ADH1BP00325 375 aa23.48■■□□□ 1.35
LSM4-201ENST00000252816 TPM3P06753 285 aa23.48■■□□□ 1.35
LSM4-201ENST00000252816 GNSP15586 552 aa23.48■■□□□ 1.35
LSM4-201ENST00000252816 MAPK8P45983 427 aa23.48■■□□□ 1.35
LSM4-201ENST00000252816 MAPKAPK2P49137 400 aa23.48■■□□□ 1.35
LSM4-201ENST00000252816 ARF5P84085 180 aa23.48■■□□□ 1.35
LSM4-201ENST00000252816 GFPT1Q06210 699 aaPredicted RBP23.48■■□□□ 1.35
LSM4-201ENST00000252816 SEMA3BQ13214 749 aa23.48■■□□□ 1.35
LSM4-201ENST00000252816 SNX19Q92543 992 aa23.48■■□□□ 1.35
LSM4-201ENST00000252816 BIRC7Q96CA5 298 aa23.48■■□□□ 1.35
LSM4-201ENST00000252816 OMDQ99983 421 aa23.48■■□□□ 1.35
LSM4-201ENST00000252816 RETREG1Q9H6L5 497 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms