RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 RTL3Q8N8U3 475 aaKnown RBP25.69■■□□□ 1.7
LSM7-201ENST00000252622 PEBP4Q96S96 227 aa25.69■■□□□ 1.7
LSM7-201ENST00000252622 DEF6Q9H4E7 631 aa25.69■■□□□ 1.7
LSM7-201ENST00000252622 ATP13A1Q9HD20 1204 aa25.69■■□□□ 1.7
LSM7-201ENST00000252622 NDFIP2Q9NV92 336 aa25.69■■□□□ 1.7
LSM7-201ENST00000252622 NYNRINQ9P2P1 1898 aaKnown RBP25.68■■□□□ 1.7
LSM7-201ENST00000252622 TNRC6BQ9UPQ9 1833 aaKnown RBP25.68■■□□□ 1.7
LSM7-201ENST00000252622 AKR1B15C9JRZ8 316 aaPredicted RBP25.68■■□□□ 1.7
LSM7-201ENST00000252622 CREB3O43889 395 aa25.68■■□□□ 1.7
LSM7-201ENST00000252622 PRPSAP2O60256 369 aa25.68■■□□□ 1.7
LSM7-201ENST00000252622 MIPP30301 263 aa25.68■■□□□ 1.7
LSM7-201ENST00000252622 GALCP54803 685 aa25.68■■□□□ 1.7
LSM7-201ENST00000252622 DLG2Q15700 870 aa25.68■■□□□ 1.7
LSM7-201ENST00000252622 ERMARDQ5T6L9 678 aa25.68■■□□□ 1.7
LSM7-201ENST00000252622 PEAR1Q5VY43 1037 aaPredicted RBP25.68■■□□□ 1.7
LSM7-201ENST00000252622 RETSATQ6NUM9 610 aa25.68■■□□□ 1.7
LSM7-201ENST00000252622 PSTKQ8IV42 348 aaKnown RBP25.68■■□□□ 1.7
LSM7-201ENST00000252622 STK40Q8N2I9 435 aa25.68■■□□□ 1.7
LSM7-201ENST00000252622 ARHGEF26Q96DR7 871 aa25.68■■□□□ 1.7
LSM7-201ENST00000252622 ZNF419Q96HQ0 510 aaPredicted RBP25.68■■□□□ 1.7
LSM7-201ENST00000252622 FAM129BQ96TA1 746 aa25.68■■□□□ 1.7
LSM7-201ENST00000252622 SPON2Q9BUD6 331 aa25.68■■□□□ 1.7
LSM7-201ENST00000252622 SNRNP25Q9BV90 132 aaKnown RBP25.68■■□□□ 1.7
LSM7-201ENST00000252622 NUP85Q9BW27 656 aa25.68■■□□□ 1.7
LSM7-201ENST00000252622 ACE2Q9BYF1 805 aaPredicted RBP25.68■■□□□ 1.7
LSM7-201ENST00000252622 MAGEH1Q9H213 219 aa25.68■■□□□ 1.7
LSM7-201ENST00000252622 PABPC3Q9H361 631 aaKnown RBP25.68■■□□□ 1.7
LSM7-201ENST00000252622 PCSK1NQ9UHG2 260 aa25.68■■□□□ 1.7
LSM7-201ENST00000252622 WASH4PA8MWX3 477 aa25.67■■□□□ 1.7
LSM7-201ENST00000252622 FGF10O15520 208 aaPredicted RBP25.67■■□□□ 1.7
LSM7-201ENST00000252622 ZMPSTE24O75844 475 aa25.67■■□□□ 1.7
LSM7-201ENST00000252622 MT-CO1P00395 513 aa25.67■■□□□ 1.7
LSM7-201ENST00000252622 VAV1P15498 845 aa25.67■■□□□ 1.7
LSM7-201ENST00000252622 HOXD12P35452 270 aa25.67■■□□□ 1.7
LSM7-201ENST00000252622 ZNF33AQ06730 810 aa25.67■■□□□ 1.7
LSM7-201ENST00000252622 SFSWAPQ12872 951 aaKnown RBP25.67■■□□□ 1.7
LSM7-201ENST00000252622 PIGHQ14442 188 aaPredicted RBP25.67■■□□□ 1.7
LSM7-201ENST00000252622 CST6Q15828 149 aa25.67■■□□□ 1.7
LSM7-201ENST00000252622 CCDC6Q16204 474 aa25.67■■□□□ 1.7
LSM7-201ENST00000252622 ACCSLQ4AC99 568 aa25.67■■□□□ 1.7
LSM7-201ENST00000252622 CYP4V2Q6ZWL3 525 aaPredicted RBP25.67■■□□□ 1.7
LSM7-201ENST00000252622 USP30Q70CQ3 517 aa25.67■■□□□ 1.7
LSM7-201ENST00000252622 GAS2L3Q86XJ1 694 aa25.67■■□□□ 1.7
LSM7-201ENST00000252622 SYT12Q8IV01 421 aa25.67■■□□□ 1.7
LSM7-201ENST00000252622 SLC41A1Q8IVJ1 513 aa25.67■■□□□ 1.7
LSM7-201ENST00000252622 NIPA2Q8N8Q9 360 aa25.67■■□□□ 1.7
LSM7-201ENST00000252622 ATP11CQ8NB49 1132 aa25.67■■□□□ 1.7
LSM7-201ENST00000252622 CADM4Q8NFZ8 388 aa25.67■■□□□ 1.7
LSM7-201ENST00000252622 FOXJ1Q92949 421 aa25.67■■□□□ 1.7
LSM7-201ENST00000252622 HSPA12BQ96MM6 686 aa25.67■■□□□ 1.7
LSM7-201ENST00000252622 PCED1AQ9H1Q7 454 aa25.67■■□□□ 1.7
LSM7-201ENST00000252622 CATSPERBQ9H7T0 1116 aa25.67■■□□□ 1.7
LSM7-201ENST00000252622 GPATCH2LQ9NWQ4 482 aa25.67■■□□□ 1.7
LSM7-201ENST00000252622 DNAI1Q9UI46 699 aa25.67■■□□□ 1.7
LSM7-201ENST00000252622 ANAPC7Q9UJX3 599 aa25.67■■□□□ 1.7
LSM7-201ENST00000252622 PRR5-ARHGAP8B1AHC4 643 aa25.66■■□□□ 1.7
LSM7-201ENST00000252622 CBX4O00257 560 aa25.66■■□□□ 1.7
LSM7-201ENST00000252622 ALOX15BO15296 676 aa25.66■■□□□ 1.7
LSM7-201ENST00000252622 AKR1B10O60218 316 aa25.66■■□□□ 1.7
LSM7-201ENST00000252622 RAMP2O60895 175 aa25.66■■□□□ 1.7
LSM7-201ENST00000252622 GLDCP23378 1020 aa25.66■■□□□ 1.7
LSM7-201ENST00000252622 ARHGAP8P85298 464 aa25.66■■□□□ 1.7
LSM7-201ENST00000252622 SLC20A2Q08357 652 aa25.66■■□□□ 1.7
LSM7-201ENST00000252622 MMAAQ8IVH4 418 aaKnown RBP25.66■■□□□ 1.7
LSM7-201ENST00000252622 PIGKQ92643 395 aa25.66■■□□□ 1.7
LSM7-201ENST00000252622 ARHGEF2Q92974 986 aaKnown RBP25.66■■□□□ 1.7
LSM7-201ENST00000252622 MRFAP1L1Q96HT8 127 aa25.66■■□□□ 1.7
LSM7-201ENST00000252622 GPR174Q9BXC1 333 aa25.66■■□□□ 1.7
LSM7-201ENST00000252622 DHX35Q9H5Z1 703 aaKnown RBP25.66■■□□□ 1.7
LSM7-201ENST00000252622 IP6K2Q9UHH9 426 aa25.66■■□□□ 1.7
LSM7-201ENST00000252622 DYNC1LI1Q9Y6G9 523 aaKnown RBP25.66■■□□□ 1.7
LSM7-201ENST00000252622 ADH1BP00325 375 aa25.65■■□□□ 1.7
LSM7-201ENST00000252622 ACVRL1P37023 503 aa25.65■■□□□ 1.7
LSM7-201ENST00000252622 ZNF75DP51815 510 aa25.65■■□□□ 1.7
LSM7-201ENST00000252622 ZNF135P52742 658 aaPredicted RBP25.65■■□□□ 1.7
LSM7-201ENST00000252622 TPI1P60174 286 aa25.65■■□□□ 1.7
LSM7-201ENST00000252622 ARF5P84085 180 aa25.65■■□□□ 1.7
LSM7-201ENST00000252622 SF3A2Q15428 464 aaKnown RBP25.65■■□□□ 1.7
LSM7-201ENST00000252622 CA9Q16790 459 aa25.65■■□□□ 1.7
LSM7-201ENST00000252622 IL31Q6EBC2 164 aa25.65■■□□□ 1.7
LSM7-201ENST00000252622 LINGO4Q6UY18 593 aa25.65■■□□□ 1.7
LSM7-201ENST00000252622 Q6ZVU0 165 aa25.65■■□□□ 1.7
LSM7-201ENST00000252622 DSG4Q86SJ6 1040 aa25.65■■□□□ 1.7
LSM7-201ENST00000252622 DEFB119Q8N690 84 aa25.65■■□□□ 1.7
LSM7-201ENST00000252622 C12orf50Q8NA57 414 aaPredicted RBP25.65■■□□□ 1.7
LSM7-201ENST00000252622 CTNNBL1Q8WYA6 563 aaPredicted RBP25.65■■□□□ 1.7
LSM7-201ENST00000252622 OR8D1Q8WZ84 308 aa25.65■■□□□ 1.7
LSM7-201ENST00000252622 CCDC42Q96M95 316 aa25.65■■□□□ 1.7
LSM7-201ENST00000252622 CHP1Q99653 195 aa25.65■■□□□ 1.7
LSM7-201ENST00000252622 NHEJ1Q9H9Q4 299 aaPredicted RBP25.65■■□□□ 1.7
LSM7-201ENST00000252622 PILRBQ9UKJ0 227 aa25.65■■□□□ 1.7
LSM7-201ENST00000252622 CHD5Q8TDI0 1954 aa25.65■■□□□ 1.7
LSM7-201ENST00000252622 RALGAPA1Q6GYQ0 2036 aa25.64■■□□□ 1.7
LSM7-201ENST00000252622 NUP205Q92621 2012 aa25.64■■□□□ 1.7
LSM7-201ENST00000252622 MCF2LO15068 1137 aa25.64■■□□□ 1.7
LSM7-201ENST00000252622 MID1O15344 667 aa25.64■■□□□ 1.7
LSM7-201ENST00000252622 H2AFZP0C0S5 128 aa25.64■■□□□ 1.7
LSM7-201ENST00000252622 ITPKAP23677 461 aa25.64■■□□□ 1.7
LSM7-201ENST00000252622 PSMD8P48556 350 aa25.64■■□□□ 1.7
LSM7-201ENST00000252622 SERPINH1P50454 418 aaKnown RBP25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms