RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 TOE1Q96GM8 510 aaKnown RBP13.09□□□□□ -0.31
VPREB3-201ENST00000248948 RPL10LQ96L21 214 aaKnown RBP13.09□□□□□ -0.31
VPREB3-201ENST00000248948 CCDC114Q96M63 670 aa13.09□□□□□ -0.31
VPREB3-201ENST00000248948 HSPA12BQ96MM6 686 aa13.09□□□□□ -0.31
VPREB3-201ENST00000248948 PABPC3Q9H361 631 aaKnown RBP13.09□□□□□ -0.31
VPREB3-201ENST00000248948 ABHD10Q9NUJ1 306 aa13.09□□□□□ -0.31
VPREB3-201ENST00000248948 SLCO3A1Q9UIG8 710 aa13.09□□□□□ -0.31
VPREB3-201ENST00000248948 FZD4Q9ULV1 537 aa13.09□□□□□ -0.31
VPREB3-201ENST00000248948 ADAMTS9Q9P2N4 1935 aa13.08□□□□□ -0.32
VPREB3-201ENST00000248948 A0A0D9SEW6 157 aa13.08□□□□□ -0.32
VPREB3-201ENST00000248948 FAM72CH0Y354 149 aa13.08□□□□□ -0.32
VPREB3-201ENST00000248948 LRCH4O75427 683 aa13.08□□□□□ -0.32
VPREB3-201ENST00000248948 SRCP12931 536 aa13.08□□□□□ -0.32
VPREB3-201ENST00000248948 ZNF135P52742 658 aaPredicted RBP13.08□□□□□ -0.32
VPREB3-201ENST00000248948 GEMIN4P57678 1058 aaKnown RBP13.08□□□□□ -0.32
VPREB3-201ENST00000248948 MAPK8IP2Q13387 824 aaPredicted RBP13.08□□□□□ -0.32
VPREB3-201ENST00000248948 SLC18A3Q16572 532 aa13.08□□□□□ -0.32
VPREB3-201ENST00000248948 AASDHQ4L235 1098 aaPredicted RBP13.08□□□□□ -0.32
VPREB3-201ENST00000248948 FAM72AQ5TYM5 149 aa13.08□□□□□ -0.32
VPREB3-201ENST00000248948 FAM72DQ6L9T8 149 aa13.08□□□□□ -0.32
VPREB3-201ENST00000248948 RETSATQ6NUM9 610 aa13.08□□□□□ -0.32
VPREB3-201ENST00000248948 RWDD4Q6NW29 188 aaKnown RBP13.08□□□□□ -0.32
VPREB3-201ENST00000248948 SCYL2Q6P3W7 929 aa13.08□□□□□ -0.32
VPREB3-201ENST00000248948 ALKBH5Q6P6C2 394 aaKnown RBP13.08□□□□□ -0.32
VPREB3-201ENST00000248948 ARMCX6Q7L4S7 300 aa13.08□□□□□ -0.32
VPREB3-201ENST00000248948 FAM72BQ86X60 149 aa13.08□□□□□ -0.32
VPREB3-201ENST00000248948 SLC41A1Q8IVJ1 513 aa13.08□□□□□ -0.32
VPREB3-201ENST00000248948 NIPA2Q8N8Q9 360 aa13.08□□□□□ -0.32
VPREB3-201ENST00000248948 RTL3Q8N8U3 475 aaKnown RBP13.08□□□□□ -0.32
VPREB3-201ENST00000248948 OR8D1Q8WZ84 308 aa13.08□□□□□ -0.32
VPREB3-201ENST00000248948 ZNF419Q96HQ0 510 aaPredicted RBP13.08□□□□□ -0.32
VPREB3-201ENST00000248948 CEP44Q9C0F1 390 aa13.08□□□□□ -0.32
VPREB3-201ENST00000248948 THAP2Q9H0W7 228 aa13.08□□□□□ -0.32
VPREB3-201ENST00000248948 MAGEH1Q9H213 219 aa13.08□□□□□ -0.32
VPREB3-201ENST00000248948 MTG2Q9H4K7 406 aa13.08□□□□□ -0.32
VPREB3-201ENST00000248948 CATSPERBQ9H7T0 1116 aa13.08□□□□□ -0.32
VPREB3-201ENST00000248948 SGK2Q9HBY8 427 aa13.08□□□□□ -0.32
VPREB3-201ENST00000248948 ATP13A1Q9HD20 1204 aa13.08□□□□□ -0.32
VPREB3-201ENST00000248948 ZNHIT6Q9NWK9 470 aaKnown RBP13.08□□□□□ -0.32
VPREB3-201ENST00000248948 DONSONQ9NYP3 566 aa13.08□□□□□ -0.32
VPREB3-201ENST00000248948 SUSD2Q9UGT4 822 aa13.08□□□□□ -0.32
VPREB3-201ENST00000248948 PILRBQ9UKJ0 227 aa13.08□□□□□ -0.32
VPREB3-201ENST00000248948 CDV3Q9UKY7 258 aaKnown RBP13.08□□□□□ -0.32
VPREB3-201ENST00000248948 AP4E1Q9UPM8 1137 aa13.08□□□□□ -0.32
VPREB3-201ENST00000248948 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.08□□□□□ -0.32
VPREB3-201ENST00000248948 MEI4A8MW99 385 aa13.07□□□□□ -0.32
VPREB3-201ENST00000248948 WASH4PA8MWX3 477 aa13.07□□□□□ -0.32
VPREB3-201ENST00000248948 PRPSAP2O60256 369 aa13.07□□□□□ -0.32
VPREB3-201ENST00000248948 SNAP91O60641 907 aa13.07□□□□□ -0.32
VPREB3-201ENST00000248948 RAMP2O60895 175 aa13.07□□□□□ -0.32
VPREB3-201ENST00000248948 CYP1A2P05177 515 aa13.07□□□□□ -0.32
VPREB3-201ENST00000248948 C5AR1P21730 350 aa13.07□□□□□ -0.32
VPREB3-201ENST00000248948 ITPKAP23677 461 aa13.07□□□□□ -0.32
VPREB3-201ENST00000248948 EPHB2P29323 1055 aa13.07□□□□□ -0.32
VPREB3-201ENST00000248948 PCK1P35558 622 aa13.07□□□□□ -0.32
VPREB3-201ENST00000248948 SERPINH1P50454 418 aaKnown RBP13.07□□□□□ -0.32
VPREB3-201ENST00000248948 SF3A2Q15428 464 aaKnown RBP13.07□□□□□ -0.32
VPREB3-201ENST00000248948 TSR1Q2NL82 804 aaKnown RBP13.07□□□□□ -0.32
VPREB3-201ENST00000248948 WDR45BQ5MNZ6 344 aa13.07□□□□□ -0.32
VPREB3-201ENST00000248948 SYCP2LQ5T4T6 812 aa13.07□□□□□ -0.32
VPREB3-201ENST00000248948 C22orf39Q6P5X5 142 aa13.07□□□□□ -0.32
VPREB3-201ENST00000248948 DNAAF5Q86Y56 855 aa13.07□□□□□ -0.32
VPREB3-201ENST00000248948 OR7D4Q8NG98 312 aa13.07□□□□□ -0.32
VPREB3-201ENST00000248948 CEP76Q8TAP6 659 aa13.07□□□□□ -0.32
VPREB3-201ENST00000248948 PIGKQ92643 395 aa13.07□□□□□ -0.32
VPREB3-201ENST00000248948 FAM131CQ96AQ9 280 aa13.07□□□□□ -0.32
VPREB3-201ENST00000248948 SNRNP25Q9BV90 132 aaKnown RBP13.07□□□□□ -0.32
VPREB3-201ENST00000248948 ACE2Q9BYF1 805 aaPredicted RBP13.07□□□□□ -0.32
VPREB3-201ENST00000248948 TRIM7Q9C029 511 aa13.07□□□□□ -0.32
VPREB3-201ENST00000248948 BTBD1Q9H0C5 482 aa13.07□□□□□ -0.32
VPREB3-201ENST00000248948 DLL3Q9NYJ7 618 aa13.07□□□□□ -0.32
VPREB3-201ENST00000248948 MYO1AQ9UBC5 1043 aa13.07□□□□□ -0.32
VPREB3-201ENST00000248948 LCMT1Q9UIC8 334 aa13.07□□□□□ -0.32
VPREB3-201ENST00000248948 ANKRD36A6QL64 1941 aa13.07□□□□□ -0.32
VPREB3-201ENST00000248948 ATXN2Q99700 1313 aaKnown RBP13.07□□□□□ -0.32
VPREB3-201ENST00000248948 LNP1A1A4G5 178 aa13.06□□□□□ -0.32
VPREB3-201ENST00000248948 ZSCAN5CA6NGD5 496 aaPredicted RBP13.06□□□□□ -0.32
VPREB3-201ENST00000248948 C1QTNF3-AMACRE9PGA6 284 aa13.06□□□□□ -0.32
VPREB3-201ENST00000248948 CBX4O00257 560 aa13.06□□□□□ -0.32
VPREB3-201ENST00000248948 KHNYNO15037 678 aaKnown RBP13.06□□□□□ -0.32
VPREB3-201ENST00000248948 MID1O15344 667 aa13.06□□□□□ -0.32
VPREB3-201ENST00000248948 SLC7A4O43246 635 aa13.06□□□□□ -0.32
VPREB3-201ENST00000248948 ZMPSTE24O75844 475 aa13.06□□□□□ -0.32
VPREB3-201ENST00000248948 SEMA4FO95754 770 aa13.06□□□□□ -0.32
VPREB3-201ENST00000248948 MIPP30301 263 aa13.06□□□□□ -0.32
VPREB3-201ENST00000248948 ID4P47928 161 aa13.06□□□□□ -0.32
VPREB3-201ENST00000248948 PSMD8P48556 350 aa13.06□□□□□ -0.32
VPREB3-201ENST00000248948 TPI1P60174 286 aa13.06□□□□□ -0.32
VPREB3-201ENST00000248948 ARF5P84085 180 aa13.06□□□□□ -0.32
VPREB3-201ENST00000248948 SLC20A2Q08357 652 aa13.06□□□□□ -0.32
VPREB3-201ENST00000248948 PIGHQ14442 188 aaPredicted RBP13.06□□□□□ -0.32
VPREB3-201ENST00000248948 DLG2Q15700 870 aa13.06□□□□□ -0.32
VPREB3-201ENST00000248948 CCDC6Q16204 474 aa13.06□□□□□ -0.32
VPREB3-201ENST00000248948 ASTE1Q2TB18 679 aaPredicted RBP13.06□□□□□ -0.32
VPREB3-201ENST00000248948 PARP15Q460N3 678 aa13.06□□□□□ -0.32
VPREB3-201ENST00000248948 CCDC122Q5T0U0 273 aa13.06□□□□□ -0.32
VPREB3-201ENST00000248948 FAM46CQ5VWP2 391 aa13.06□□□□□ -0.32
VPREB3-201ENST00000248948 SLC23A3Q6PIS1 610 aa13.06□□□□□ -0.32
VPREB3-201ENST00000248948 Q6ZVU0 165 aa13.06□□□□□ -0.32
VPREB3-201ENST00000248948 CYP4V2Q6ZWL3 525 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms