RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 KLC1Q07866 573 aa9.33□□□□□ -0.92
SYDE2-201ENST00000234668 MPP3Q13368 585 aa9.33□□□□□ -0.92
SYDE2-201ENST00000234668 RABGAP1LQ5R372 815 aa9.33□□□□□ -0.92
SYDE2-201ENST00000234668 ESRP1Q6NXG1 681 aaKnown RBP9.33□□□□□ -0.92
SYDE2-201ENST00000234668 TAC4Q86UU9 113 aa9.33□□□□□ -0.92
SYDE2-201ENST00000234668 CCNYL1Q8N7R7 359 aa9.33□□□□□ -0.92
SYDE2-201ENST00000234668 NT5C3BQ969T7 300 aa9.33□□□□□ -0.92
SYDE2-201ENST00000234668 RBBP8Q99708 897 aa9.33□□□□□ -0.92
SYDE2-201ENST00000234668 GATA5Q9BWX5 397 aaPredicted RBP9.33□□□□□ -0.92
SYDE2-201ENST00000234668 NUF2Q9BZD4 464 aa9.33□□□□□ -0.92
SYDE2-201ENST00000234668 LRRC40Q9H9A6 602 aa9.33□□□□□ -0.92
SYDE2-201ENST00000234668 FBXW11Q9UKB1 542 aa9.33□□□□□ -0.92
SYDE2-201ENST00000234668 CDY2AQ9Y6F7 541 aa9.33□□□□□ -0.92
SYDE2-201ENST00000234668 C17orf102A2RUQ5 167 aa9.32□□□□□ -0.92
SYDE2-201ENST00000234668 G3V2L1 256 aa9.32□□□□□ -0.92
SYDE2-201ENST00000234668 ZNF195O14628 629 aa9.32□□□□□ -0.92
SYDE2-201ENST00000234668 MAP3K7O43318 606 aa9.32□□□□□ -0.92
SYDE2-201ENST00000234668 AP2A1O95782 977 aa9.32□□□□□ -0.92
SYDE2-201ENST00000234668 MT-CO1P00395 513 aa9.32□□□□□ -0.92
SYDE2-201ENST00000234668 GSTA2P09210 222 aa9.32□□□□□ -0.92
SYDE2-201ENST00000234668 MLNP12872 115 aa9.32□□□□□ -0.92
SYDE2-201ENST00000234668 WARSP23381 471 aaKnown RBP9.32□□□□□ -0.92
SYDE2-201ENST00000234668 GABRB3P28472 473 aa9.32□□□□□ -0.92
SYDE2-201ENST00000234668 SPRP35270 261 aaPredicted RBP9.32□□□□□ -0.92
SYDE2-201ENST00000234668 PNPLA4P41247 253 aa9.32□□□□□ -0.92
SYDE2-201ENST00000234668 RPL34P49207 117 aaKnown RBP9.32□□□□□ -0.92
SYDE2-201ENST00000234668 USP10Q14694 798 aaKnown RBP9.32□□□□□ -0.92
SYDE2-201ENST00000234668 PAFAH1B3Q15102 231 aaKnown RBP9.32□□□□□ -0.92
SYDE2-201ENST00000234668 NAIF1Q69YI7 327 aaPredicted RBP9.32□□□□□ -0.92
SYDE2-201ENST00000234668 C4orf22Q6V702 233 aa9.32□□□□□ -0.92
SYDE2-201ENST00000234668 ARCQ7LC44 396 aa9.32□□□□□ -0.92
SYDE2-201ENST00000234668 LRRTM3Q86VH5 581 aa9.32□□□□□ -0.92
SYDE2-201ENST00000234668 CCNJLQ8IV13 435 aa9.32□□□□□ -0.92
SYDE2-201ENST00000234668 PPFIBP2Q8ND30 876 aa9.32□□□□□ -0.92
SYDE2-201ENST00000234668 GPR152Q8TDT2 470 aa9.32□□□□□ -0.92
SYDE2-201ENST00000234668 VPS39Q96JC1 886 aa9.32□□□□□ -0.92
SYDE2-201ENST00000234668 LENG8Q96PV6 779 aaPredicted RBP9.32□□□□□ -0.92
SYDE2-201ENST00000234668 PPP1R10Q96QC0 940 aaKnown RBP9.32□□□□□ -0.92
SYDE2-201ENST00000234668 FERMT1Q9BQL6 677 aa9.32□□□□□ -0.92
SYDE2-201ENST00000234668 AGO3Q9H9G7 860 aaKnown RBP9.32□□□□□ -0.92
SYDE2-201ENST00000234668 BATF3Q9NR55 127 aa9.32□□□□□ -0.92
SYDE2-201ENST00000234668 SOX13Q9UN79 622 aa9.32□□□□□ -0.92
SYDE2-201ENST00000234668 RUVBL2Q9Y230 463 aaKnown RBP9.32□□□□□ -0.92
SYDE2-201ENST00000234668 MTF2Q9Y483 593 aaPredicted RBP9.32□□□□□ -0.92
SYDE2-201ENST00000234668 AK5Q9Y6K8 562 aa9.32□□□□□ -0.92
SYDE2-201ENST00000234668 XPOTO43592 962 aaKnown RBP9.32□□□□□ -0.92
SYDE2-201ENST00000234668 CELF2O95319 508 aaKnown RBP9.32□□□□□ -0.92
SYDE2-201ENST00000234668 LMNAP02545 664 aaKnown RBP9.32□□□□□ -0.92
SYDE2-201ENST00000234668 THP07101 528 aa9.32□□□□□ -0.92
SYDE2-201ENST00000234668 ZNF865P0CJ78 1059 aaPredicted RBP9.32□□□□□ -0.92
SYDE2-201ENST00000234668 TCN1P20061 433 aaPredicted RBP9.32□□□□□ -0.92
SYDE2-201ENST00000234668 COPAP53621 1224 aa9.32□□□□□ -0.92
SYDE2-201ENST00000234668 ADAM17P78536 824 aa9.32□□□□□ -0.92
SYDE2-201ENST00000234668 SEPT6Q14141 434 aa9.32□□□□□ -0.92
SYDE2-201ENST00000234668 PDCD2Q16342 344 aaPredicted RBP9.32□□□□□ -0.92
SYDE2-201ENST00000234668 GNASQ5JWF2 1037 aa9.32□□□□□ -0.92
SYDE2-201ENST00000234668 LDB1Q86U70 411 aaPredicted RBP9.32□□□□□ -0.92
SYDE2-201ENST00000234668 TDRD5Q8NAT2 981 aaKnown RBP9.32□□□□□ -0.92
SYDE2-201ENST00000234668 USP13Q92995 863 aaPredicted RBP9.32□□□□□ -0.92
SYDE2-201ENST00000234668 MYLPFQ96A32 169 aa9.32□□□□□ -0.92
SYDE2-201ENST00000234668 FAM136AQ96C01 138 aa9.32□□□□□ -0.92
SYDE2-201ENST00000234668 SLC2A13Q96QE2 648 aa9.32□□□□□ -0.92
SYDE2-201ENST00000234668 NMRAL1Q9HBL8 299 aa9.32□□□□□ -0.92
SYDE2-201ENST00000234668 ARL5CA6NH57 179 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 A6NHS1 94 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 STX16-NPEPL1H3BU86 382 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 GABRDO14764 452 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 AHSGP02765 367 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 TSPAN8P19075 237 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 MX2P20592 715 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 SERPINB6P35237 376 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 GARSP41250 739 aaKnown RBP9.31□□□□□ -0.92
SYDE2-201ENST00000234668 CXCR3P49682 368 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 RAP1GDS1P52306 607 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 PLK1P53350 603 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 CRYBB1P53674 252 aaPredicted RBP9.31□□□□□ -0.92
SYDE2-201ENST00000234668 ACTR3P61158 418 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 CNGA3Q16281 694 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 GRTP1Q5TC63 336 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 ARHGAP24Q8N264 748 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 TOP6BLQ8N6T0 577 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 ZSCAN18Q8TBC5 510 aaPredicted RBP9.31□□□□□ -0.92
SYDE2-201ENST00000234668 NDNQ99608 321 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 CPNE1Q99829 537 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 AP5M1Q9H0R1 490 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 SUDS3Q9H7L9 328 aaPredicted RBP9.31□□□□□ -0.92
SYDE2-201ENST00000234668 FAM105AQ9NUU6 356 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 MKS1Q9NXB0 559 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 IGSF9Q9P2J2 1179 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 GTF2IRD1Q9UHL9 959 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 C9IYK1 514 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 MAGEC1O60732 1142 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 IL1BP01584 269 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 HOXD8P13378 290 aaPredicted RBP9.31□□□□□ -0.92
SYDE2-201ENST00000234668 LIMK2P53671 638 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 PKNOX1P55347 436 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 GJA9P57773 515 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 MAXP61244 160 aa9.31□□□□□ -0.92
SYDE2-201ENST00000234668 ARL13AQ5H913 290 aaPredicted RBP9.31□□□□□ -0.92
SYDE2-201ENST00000234668 SPANXN3Q5MJ09 141 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms