RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 SEC24CP53992 1094 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 XIAPP98170 497 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 NRG1Q02297 640 aaPredicted RBP8.52□□□□□ -1.05
SPARC-201ENST00000231061 DRP2Q13474 957 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 NPTX1Q15818 432 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 KCNJ8Q15842 424 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 AMHR2Q16671 573 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 USP51Q70EK9 711 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 NIPA2Q8N8Q9 360 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 BANPQ8N9N5 519 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 DNAAF3Q8N9W5 541 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 RAB7BQ96AH8 199 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 CELF4Q9BZC1 486 aaKnown RBP8.52□□□□□ -1.05
SPARC-201ENST00000231061 EVA1BQ9NVM1 165 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 SEPT3Q9UH03 358 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 PCDHGB1Q9Y5G3 927 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 DDX3XO00571 662 aaKnown RBP eCLIP8.52□□□□□ -1.05
SPARC-201ENST00000231061 SMAD9O15198 467 aaKnown RBP8.52□□□□□ -1.05
SPARC-201ENST00000231061 NDUFB10O96000 172 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 TRIM49P0CI25 452 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 TRIM49CP0CI26 452 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 CTNNA2P26232 953 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 TLX1P31314 330 aaPredicted RBP8.52□□□□□ -1.05
SPARC-201ENST00000231061 ATXN3P54252 364 aaPredicted RBP8.52□□□□□ -1.05
SPARC-201ENST00000231061 GALCP54803 685 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 NRLP54845 237 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 ARHGAP8P85298 464 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 TIGD2Q4W5G0 525 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 JMJD6Q6NYC1 403 aaPredicted RBP8.52□□□□□ -1.05
SPARC-201ENST00000231061 SLC41A1Q8IVJ1 513 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 ST8SIA2Q92186 375 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 SLC35C1Q96A29 364 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 DYDC2Q96IM9 177 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 PARD6GQ9BYG4 376 aaPredicted RBP8.52□□□□□ -1.05
SPARC-201ENST00000231061 PCDHGB4Q9UN71 923 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 SLC22A14Q9Y267 594 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 BCS1LQ9Y276 419 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 LRRC42Q9Y546 428 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 MYH7BA7E2Y1 1941 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 CDK5RAP2Q96SN8 1893 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 hCG_2039718K7EN88 272 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 EML1O00423 815 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 SLC9A3R1O14745 358 aaPredicted RBP8.52□□□□□ -1.05
SPARC-201ENST00000231061 SLC25A17O43808 307 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 HSPA9P38646 679 aaKnown RBP8.52□□□□□ -1.05
SPARC-201ENST00000231061 SCTRP47872 440 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 CACNA2D1P54289 1103 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 CALCOCO2Q13137 446 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 DNAJC3Q13217 504 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 PHKG1Q16816 387 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 PARP6Q2NL67 630 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 SPOPLQ6IQ16 392 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 USP50Q70EL3 339 aaPredicted RBP8.52□□□□□ -1.05
SPARC-201ENST00000231061 CCDC28AQ8IWP9 274 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 ZC3H3Q8IXZ2 948 aaKnown RBP8.52□□□□□ -1.05
SPARC-201ENST00000231061 MREGQ8N565 214 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 FBXO22Q8NEZ5 403 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 PRPF31Q8WWY3 499 aaKnown RBP8.52□□□□□ -1.05
SPARC-201ENST00000231061 CENPIQ92674 756 aaPredicted RBP8.52□□□□□ -1.05
SPARC-201ENST00000231061 REXO5Q96IC2 774 aaKnown RBP8.52□□□□□ -1.05
SPARC-201ENST00000231061 SARGQ9BW04 601 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 PRKD2Q9BZL6 878 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 FAM192AQ9GZU8 254 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 OSGEPQ9NPF4 335 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 ARMC1Q9NVT9 282 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 SPATA6Q9NWH7 488 aaPredicted RBP8.52□□□□□ -1.05
SPARC-201ENST00000231061 NYAP2Q9P242 653 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 KIF17Q9P2E2 1029 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 VPS4AQ9UN37 437 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 ANKRD6Q9Y2G4 727 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 DERAQ9Y315 318 aa8.52□□□□□ -1.05
SPARC-201ENST00000231061 NHSQ6T4R5 1651 aa8.51□□□□□ -1.05
SPARC-201ENST00000231061 TRIM77I1YAP6 450 aa8.51□□□□□ -1.05
SPARC-201ENST00000231061 SLC16A3O15427 465 aaKnown RBP8.51□□□□□ -1.05
SPARC-201ENST00000231061 EYA4O95677 639 aa8.51□□□□□ -1.05
SPARC-201ENST00000231061 EGFRP00533 1210 aa8.51□□□□□ -1.05
SPARC-201ENST00000231061 FGGP02679 453 aa8.51□□□□□ -1.05
SPARC-201ENST00000231061 TP53P04637 393 aaPredicted RBP8.51□□□□□ -1.05
SPARC-201ENST00000231061 BMP3P12645 472 aa8.51□□□□□ -1.05
SPARC-201ENST00000231061 ALDH4A1P30038 563 aa8.51□□□□□ -1.05
SPARC-201ENST00000231061 SPRED3Q2MJR0 410 aa8.51□□□□□ -1.05
SPARC-201ENST00000231061 PSRC1Q6PGN9 363 aaPredicted RBP8.51□□□□□ -1.05
SPARC-201ENST00000231061 NSMFQ6X4W1 530 aa8.51□□□□□ -1.05
SPARC-201ENST00000231061 CATSPERGQ6ZRH7 1159 aa8.51□□□□□ -1.05
SPARC-201ENST00000231061 ARFGAP2Q8N6H7 521 aa8.51□□□□□ -1.05
SPARC-201ENST00000231061 ZNF454Q8N9F8 522 aa8.51□□□□□ -1.05
SPARC-201ENST00000231061 LRRC57Q8N9N7 239 aa8.51□□□□□ -1.05
SPARC-201ENST00000231061 ACTRT1Q8TDG2 376 aa8.51□□□□□ -1.05
SPARC-201ENST00000231061 CAPSLQ8WWF8 208 aa8.51□□□□□ -1.05
SPARC-201ENST00000231061 GATA6Q92908 595 aa8.51□□□□□ -1.05
SPARC-201ENST00000231061 SLC29A1Q99808 456 aa8.51□□□□□ -1.05
SPARC-201ENST00000231061 TRIM51Q9BSJ1 452 aa8.51□□□□□ -1.05
SPARC-201ENST00000231061 RHOBTB2Q9BYZ6 727 aa8.51□□□□□ -1.05
SPARC-201ENST00000231061 NEUROG2Q9H2A3 272 aa8.51□□□□□ -1.05
SPARC-201ENST00000231061 TMEM245Q9H330 911 aa8.51□□□□□ -1.05
SPARC-201ENST00000231061 TRPV4Q9HBA0 871 aa8.51□□□□□ -1.05
SPARC-201ENST00000231061 STMN3Q9NZ72 180 aa8.51□□□□□ -1.05
SPARC-201ENST00000231061 PKD2L1Q9P0L9 805 aa8.51□□□□□ -1.05
SPARC-201ENST00000231061 DNAJC12Q9UKB3 198 aa8.51□□□□□ -1.05
SPARC-201ENST00000231061 UTP11Q9Y3A2 253 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms