RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 MAMSTRQ6ZN01 415 aa24.18■■□□□ 1.46
HOMER3-201ENST00000221222 ARHGAP12Q8IWW6 846 aa24.18■■□□□ 1.46
HOMER3-201ENST00000221222 NPWQ8N729 165 aa24.18■■□□□ 1.46
HOMER3-201ENST00000221222 PQLC3Q8N755 202 aa24.18■■□□□ 1.46
HOMER3-201ENST00000221222 KDM1BQ8NB78 822 aa24.18■■□□□ 1.46
HOMER3-201ENST00000221222 ALG3Q92685 438 aa24.18■■□□□ 1.46
HOMER3-201ENST00000221222 PRDM16Q9HAZ2 1276 aa24.18■■□□□ 1.46
HOMER3-201ENST00000221222 ATP13A1Q9HD20 1204 aa24.18■■□□□ 1.46
HOMER3-201ENST00000221222 PLA2G4CQ9UP65 541 aa24.18■■□□□ 1.46
HOMER3-201ENST00000221222 MFHAS1Q9Y4C4 1052 aa24.18■■□□□ 1.46
HOMER3-201ENST00000221222 FAM186AA6NE01 2351 aa24.18■■□□□ 1.46
HOMER3-201ENST00000221222 CXorf51AA0A1B0GTR3 108 aa24.17■■□□□ 1.46
HOMER3-201ENST00000221222 PRR23AA6NEV1 266 aa24.17■■□□□ 1.46
HOMER3-201ENST00000221222 RASA4BC9J798 803 aa24.17■■□□□ 1.46
HOMER3-201ENST00000221222 DDX3YO15523 660 aaKnown RBP24.17■■□□□ 1.46
HOMER3-201ENST00000221222 RASA4O43374 803 aa24.17■■□□□ 1.46
HOMER3-201ENST00000221222 ATG13O75143 517 aa24.17■■□□□ 1.46
HOMER3-201ENST00000221222 SRPRAP08240 638 aaKnown RBP24.17■■□□□ 1.46
HOMER3-201ENST00000221222 CDKN2BP42772 138 aa24.17■■□□□ 1.46
HOMER3-201ENST00000221222 VASPP50552 380 aaPredicted RBP24.17■■□□□ 1.46
HOMER3-201ENST00000221222 ECT2LQ008S8 904 aa24.17■■□□□ 1.46
HOMER3-201ENST00000221222 MEI1Q5TIA1 1274 aa24.17■■□□□ 1.46
HOMER3-201ENST00000221222 PKN3Q6P5Z2 889 aa24.17■■□□□ 1.46
HOMER3-201ENST00000221222 SPOCD1Q6ZMY3 1216 aa24.17■■□□□ 1.46
HOMER3-201ENST00000221222 SPEM1Q8N4L4 309 aa24.17■■□□□ 1.46
HOMER3-201ENST00000221222 ALLCQ8N6M5 410 aa24.17■■□□□ 1.46
HOMER3-201ENST00000221222 UBL4BQ8N7F7 174 aa24.17■■□□□ 1.46
HOMER3-201ENST00000221222 CYB5D2Q8WUJ1 264 aa24.17■■□□□ 1.46
HOMER3-201ENST00000221222 MRGPRX3Q96LB0 322 aa24.17■■□□□ 1.46
HOMER3-201ENST00000221222 VPS51Q9UID3 782 aa24.17■■□□□ 1.46
HOMER3-201ENST00000221222 PACSIN2Q9UNF0 486 aaPredicted RBP24.17■■□□□ 1.46
HOMER3-201ENST00000221222 ERVW-1Q9UQF0 538 aa24.17■■□□□ 1.46
HOMER3-201ENST00000221222 NYNRINQ9P2P1 1898 aaKnown RBP24.17■■□□□ 1.46
HOMER3-201ENST00000221222 USP27XA6NNY8 438 aa24.16■■□□□ 1.46
HOMER3-201ENST00000221222 ZMPSTE24O75844 475 aa24.16■■□□□ 1.46
HOMER3-201ENST00000221222 NTSR1P30989 418 aa24.16■■□□□ 1.46
HOMER3-201ENST00000221222 SERPINB6P35237 376 aa24.16■■□□□ 1.46
HOMER3-201ENST00000221222 CTSOP43234 321 aaPredicted RBP24.16■■□□□ 1.46
HOMER3-201ENST00000221222 COPS2P61201 443 aa24.16■■□□□ 1.46
HOMER3-201ENST00000221222 ZNF234Q14588 700 aa24.16■■□□□ 1.46
HOMER3-201ENST00000221222 PAFAH1B3Q15102 231 aaKnown RBP24.16■■□□□ 1.46
HOMER3-201ENST00000221222 NCBP2-AS2Q69YL0 99 aa24.16■■□□□ 1.46
HOMER3-201ENST00000221222 MYO19Q96H55 970 aa24.16■■□□□ 1.46
HOMER3-201ENST00000221222 CELF6Q96J87 481 aaKnown RBP24.16■■□□□ 1.46
HOMER3-201ENST00000221222 ACOX2Q99424 681 aa24.16■■□□□ 1.46
HOMER3-201ENST00000221222 SPON2Q9BUD6 331 aa24.16■■□□□ 1.46
HOMER3-201ENST00000221222 ZDHHC4Q9NPG8 344 aa24.16■■□□□ 1.46
HOMER3-201ENST00000221222 KCND1Q9NSA2 647 aa24.16■■□□□ 1.46
HOMER3-201ENST00000221222 MMP17Q9ULZ9 603 aa24.16■■□□□ 1.46
HOMER3-201ENST00000221222 VPS13AQ96RL7 3174 aa24.16■■□□□ 1.46
HOMER3-201ENST00000221222 MYO15AQ9UKN7 3530 aa24.16■■□□□ 1.46
HOMER3-201ENST00000221222 KLF8O95600 359 aaPredicted RBP24.16■■□□□ 1.46
HOMER3-201ENST00000221222 MTAPQ13126 283 aa24.16■■□□□ 1.46
HOMER3-201ENST00000221222 SERINC3Q13530 473 aa24.16■■□□□ 1.46
HOMER3-201ENST00000221222 PPP2R5EQ16537 467 aa24.16■■□□□ 1.46
HOMER3-201ENST00000221222 TFDP3Q5H9I0 405 aa24.16■■□□□ 1.46
HOMER3-201ENST00000221222 SLC9A4Q6AI14 798 aa24.16■■□□□ 1.46
HOMER3-201ENST00000221222 IL31Q6EBC2 164 aa24.16■■□□□ 1.46
HOMER3-201ENST00000221222 CHPFQ8IZ52 775 aa24.16■■□□□ 1.46
HOMER3-201ENST00000221222 HMCESQ96FZ2 354 aa24.16■■□□□ 1.46
HOMER3-201ENST00000221222 GABRG3Q99928 467 aa24.16■■□□□ 1.46
HOMER3-201ENST00000221222 SLC39A8Q9C0K1 460 aa24.16■■□□□ 1.46
HOMER3-201ENST00000221222 TMEM245Q9H330 911 aa24.16■■□□□ 1.46
HOMER3-201ENST00000221222 HS3ST2Q9Y278 367 aa24.16■■□□□ 1.46
HOMER3-201ENST00000221222 CKAP5Q14008 2032 aa24.15■■□□□ 1.46
HOMER3-201ENST00000221222 KDELR3O43731 214 aa24.15■■□□□ 1.46
HOMER3-201ENST00000221222 SNAP91O60641 907 aa24.15■■□□□ 1.46
HOMER3-201ENST00000221222 ADAM23O75077 832 aa24.15■■□□□ 1.46
HOMER3-201ENST00000221222 IL12RB1P42701 662 aa24.15■■□□□ 1.46
HOMER3-201ENST00000221222 NUMBP49757 651 aa24.15■■□□□ 1.46
HOMER3-201ENST00000221222 EOGTQ5NDL2 527 aa24.15■■□□□ 1.46
HOMER3-201ENST00000221222 SYT13Q7L8C5 426 aa24.15■■□□□ 1.46
HOMER3-201ENST00000221222 CCDC33Q8N5R6 958 aa24.15■■□□□ 1.46
HOMER3-201ENST00000221222 TXNDC5Q8NBS9 432 aaKnown RBP24.15■■□□□ 1.46
HOMER3-201ENST00000221222 NKD2Q969F2 451 aaPredicted RBP24.15■■□□□ 1.46
HOMER3-201ENST00000221222 MAK16Q9BXY0 300 aaKnown RBP24.15■■□□□ 1.46
HOMER3-201ENST00000221222 CACNA2D2Q9NY47 1150 aa24.15■■□□□ 1.46
HOMER3-201ENST00000221222 SLC25A13Q9UJS0 675 aa24.15■■□□□ 1.46
HOMER3-201ENST00000221222 HPCAL4Q9UM19 191 aa24.15■■□□□ 1.46
HOMER3-201ENST00000221222 STON1Q9Y6Q2 735 aa24.15■■□□□ 1.46
HOMER3-201ENST00000221222 CFAP54Q96N23 3096 aa24.15■■□□□ 1.46
HOMER3-201ENST00000221222 hCG_1818297A0A087WSY0 165 aa24.14■■□□□ 1.45
HOMER3-201ENST00000221222 ARHGAP42A6NI28 874 aa24.14■■□□□ 1.45
HOMER3-201ENST00000221222 SGK1O00141 431 aa24.14■■□□□ 1.45
HOMER3-201ENST00000221222 CBX4O00257 560 aa24.14■■□□□ 1.45
HOMER3-201ENST00000221222 GLDCP23378 1020 aa24.14■■□□□ 1.45
HOMER3-201ENST00000221222 PTPN7P35236 360 aa24.14■■□□□ 1.45
HOMER3-201ENST00000221222 ST8SIA6P61647 398 aa24.14■■□□□ 1.45
HOMER3-201ENST00000221222 ARF5P84085 180 aa24.14■■□□□ 1.45
HOMER3-201ENST00000221222 SLC20A2Q08357 652 aa24.14■■□□□ 1.45
HOMER3-201ENST00000221222 FNDC3BQ53EP0 1204 aaKnown RBP24.14■■□□□ 1.45
HOMER3-201ENST00000221222 HS1BP3Q53T59 392 aa24.14■■□□□ 1.45
HOMER3-201ENST00000221222 SDE2Q6IQ49 451 aa24.14■■□□□ 1.45
HOMER3-201ENST00000221222 RETSATQ6NUM9 610 aa24.14■■□□□ 1.45
HOMER3-201ENST00000221222 CCDC50Q8IVM0 306 aa24.14■■□□□ 1.45
HOMER3-201ENST00000221222 PLD5Q8N7P1 536 aa24.14■■□□□ 1.45
HOMER3-201ENST00000221222 TRAF3IP1Q8TDR0 691 aaPredicted RBP24.14■■□□□ 1.45
HOMER3-201ENST00000221222 RPL10LQ96L21 214 aaKnown RBP24.14■■□□□ 1.45
HOMER3-201ENST00000221222 EFR3BQ9Y2G0 817 aa24.14■■□□□ 1.45
HOMER3-201ENST00000221222 CACNA1IQ9P0X4 2223 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms