RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 MTMR8Q96EF0 704 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 PTPRHQ9HD43 1115 aa19.24■□□□□ 0.67
SMPD3-201ENST00000219334 ADH1CP00326 375 aa19.23■□□□□ 0.67
SMPD3-201ENST00000219334 RARAP10276 462 aa19.23■□□□□ 0.67
SMPD3-201ENST00000219334 PEX6Q13608 980 aa19.23■□□□□ 0.67
SMPD3-201ENST00000219334 ITIH4Q14624 930 aa19.23■□□□□ 0.67
SMPD3-201ENST00000219334 C15orf59Q2T9L4 293 aaPredicted RBP19.23■□□□□ 0.67
SMPD3-201ENST00000219334 FAM45BPQ6NSW5 357 aa19.23■□□□□ 0.67
SMPD3-201ENST00000219334 ANKRD23Q86SG2 305 aa19.23■□□□□ 0.67
SMPD3-201ENST00000219334 KATNAL2Q8IYT4 538 aa19.23■□□□□ 0.67
SMPD3-201ENST00000219334 VGLL2Q8N8G2 317 aa19.23■□□□□ 0.67
SMPD3-201ENST00000219334 DUSP9Q99956 384 aaKnown RBP19.23■□□□□ 0.67
SMPD3-201ENST00000219334 LRRC14BA6NHZ5 514 aa19.23■□□□□ 0.67
SMPD3-201ENST00000219334 CES2O00748 559 aa19.23■□□□□ 0.67
SMPD3-201ENST00000219334 SH3BGRLO75368 114 aa19.23■□□□□ 0.67
SMPD3-201ENST00000219334 ASGR1P07306 291 aa19.23■□□□□ 0.67
SMPD3-201ENST00000219334 PPP3CAQ08209 521 aa19.23■□□□□ 0.67
SMPD3-201ENST00000219334 KIAA2013Q8IYS2 634 aa19.23■□□□□ 0.67
SMPD3-201ENST00000219334 NACC2Q96BF6 587 aa19.23■□□□□ 0.67
SMPD3-201ENST00000219334 ADI1Q9BV57 179 aa19.23■□□□□ 0.67
SMPD3-201ENST00000219334 SEMA4AQ9H3S1 761 aa19.23■□□□□ 0.67
SMPD3-201ENST00000219334 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.23■□□□□ 0.67
SMPD3-201ENST00000219334 FGF19O95750 216 aa19.23■□□□□ 0.67
SMPD3-201ENST00000219334 UMPSP11172 480 aa19.23■□□□□ 0.67
SMPD3-201ENST00000219334 TKTP29401 623 aaKnown RBP19.23■□□□□ 0.67
SMPD3-201ENST00000219334 GRIK5Q16478 980 aa19.23■□□□□ 0.67
SMPD3-201ENST00000219334 LRRC39Q96DD0 335 aa19.23■□□□□ 0.67
SMPD3-201ENST00000219334 ADPRHL2Q9NX46 363 aa19.23■□□□□ 0.67
SMPD3-201ENST00000219334 SSTR1P30872 391 aa19.23■□□□□ 0.67
SMPD3-201ENST00000219334 ZNF143P52747 638 aaPredicted RBP19.23■□□□□ 0.67
SMPD3-201ENST00000219334 DPYSL3Q14195 570 aa19.23■□□□□ 0.67
SMPD3-201ENST00000219334 DUSP28Q4G0W2 176 aa19.23■□□□□ 0.67
SMPD3-201ENST00000219334 TMEM154Q6P9G4 183 aa19.23■□□□□ 0.67
SMPD3-201ENST00000219334 TMEM132CQ8N3T6 1108 aa19.23■□□□□ 0.67
SMPD3-201ENST00000219334 TTPALQ9BTX7 342 aa19.23■□□□□ 0.67
SMPD3-201ENST00000219334 MEI4A8MW99 385 aa19.22■□□□□ 0.67
SMPD3-201ENST00000219334 ELNP15502 786 aa19.22■□□□□ 0.67
SMPD3-201ENST00000219334 S100A3P33764 101 aa19.22■□□□□ 0.67
SMPD3-201ENST00000219334 GRM5P41594 1212 aa19.22■□□□□ 0.67
SMPD3-201ENST00000219334 RXRGP48443 463 aa19.22■□□□□ 0.67
SMPD3-201ENST00000219334 PLPP4Q5VZY2 271 aa19.22■□□□□ 0.67
SMPD3-201ENST00000219334 FAM183BPQ6ZVS7 135 aa19.22■□□□□ 0.67
SMPD3-201ENST00000219334 NKAPQ8N5F7 415 aaKnown RBP19.22■□□□□ 0.67
SMPD3-201ENST00000219334 KYQ8NBH2 561 aa19.22■□□□□ 0.67
SMPD3-201ENST00000219334 ZNF510Q9Y2H8 683 aa19.22■□□□□ 0.67
SMPD3-201ENST00000219334 CYP3A7-CYP3A51PA0A087WV96 503 aa19.22■□□□□ 0.67
SMPD3-201ENST00000219334 CCDC154A6NI56 674 aa19.22■□□□□ 0.67
SMPD3-201ENST00000219334 UBTFL6P0CB48 400 aaPredicted RBP19.22■□□□□ 0.67
SMPD3-201ENST00000219334 CYP3A7P24462 503 aa19.22■□□□□ 0.67
SMPD3-201ENST00000219334 OR1D2P34982 312 aa19.22■□□□□ 0.67
SMPD3-201ENST00000219334 CDK7P50613 346 aa19.22■□□□□ 0.67
SMPD3-201ENST00000219334 TCEA2Q15560 299 aa19.22■□□□□ 0.67
SMPD3-201ENST00000219334 ZNHIT3Q15649 155 aaPredicted RBP19.22■□□□□ 0.67
SMPD3-201ENST00000219334 MTDHQ86UE4 582 aaKnown RBP19.22■□□□□ 0.67
SMPD3-201ENST00000219334 UTP15Q8TED0 518 aaKnown RBP19.22■□□□□ 0.67
SMPD3-201ENST00000219334 BRD9Q9H8M2 597 aa19.22■□□□□ 0.67
SMPD3-201ENST00000219334 NFKBIL1Q9UBC1 381 aaPredicted RBP19.22■□□□□ 0.67
SMPD3-201ENST00000219334 A0A0A0MRY4 1105 aa19.22■□□□□ 0.67
SMPD3-201ENST00000219334 TRDMT1O14717 391 aaKnown RBP19.22■□□□□ 0.67
SMPD3-201ENST00000219334 GABRR2P28476 465 aa19.22■□□□□ 0.67
SMPD3-201ENST00000219334 SOX6P35712 828 aa19.22■□□□□ 0.67
SMPD3-201ENST00000219334 NUP107P57740 925 aa19.22■□□□□ 0.67
SMPD3-201ENST00000219334 MSLNQ13421 630 aaPredicted RBP19.22■□□□□ 0.67
SMPD3-201ENST00000219334 TARBP2Q15633 366 aaKnown RBP19.22■□□□□ 0.67
SMPD3-201ENST00000219334 MACC1Q6ZN28 852 aa19.22■□□□□ 0.67
SMPD3-201ENST00000219334 PPTC7Q8NI37 304 aa19.22■□□□□ 0.67
SMPD3-201ENST00000219334 SPATA13Q96N96 652 aa19.22■□□□□ 0.67
SMPD3-201ENST00000219334 RCN1Q15293 331 aa19.22■□□□□ 0.67
SMPD3-201ENST00000219334 CENPTQ96BT3 561 aa19.22■□□□□ 0.67
SMPD3-201ENST00000219334 CROTQ9UKG9 612 aa19.22■□□□□ 0.67
SMPD3-201ENST00000219334 hCG_2014768A0A024R1R8 64 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 NT5C1B-RDH14C9J2C7 533 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 GLUD2P49448 558 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 COPZ1P61923 177 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 IL27RAQ6UWB1 636 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 C16orf62Q7Z3J2 963 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 FAM228AQ86W67 206 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 COMMD2Q86X83 199 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 PCDHAC2Q9Y5I4 1007 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.21■□□□□ 0.67
SMPD3-201ENST00000219334 SGTAO43765 313 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 TLR5O60602 858 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 DSG1Q02413 1049 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 TREML2Q5T2D2 321 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 STAG3L4Q8TBR4 150 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 APOPT1Q96IL0 206 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 EXO5Q9H790 373 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 THAP1Q9NVV9 213 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 SAE1Q9UBE0 346 aaPredicted RBP19.21■□□□□ 0.67
SMPD3-201ENST00000219334 RIPK2O43353 540 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 DNTTP04053 509 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 FEN1P39748 380 aaKnown RBP19.21■□□□□ 0.67
SMPD3-201ENST00000219334 ABL2P42684 1182 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 CDK16Q00536 496 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 FBXW10Q5XX13 1052 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 CASP12Q6UXS9 341 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 ZNF621Q6ZSS3 439 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 DET1Q7L5Y6 550 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 OR8D1Q8WZ84 308 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 POMKQ9H5K3 350 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms