RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 RGSL1A5PLK6 1076 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.56□□□□□ -0.24
SRP54-201ENST00000216774 FBXO21O94952 628 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 DNAJB1P25685 340 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 ADSLP30566 484 aaPredicted RBP13.56□□□□□ -0.24
SRP54-201ENST00000216774 GTF2A2P52657 109 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 TPI1P60174 286 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 TMEM62Q0P6H9 643 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 LRRC36Q1X8D7 754 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 ANO4Q32M45 955 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 MMEL1Q495T6 779 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 OGFRL1Q5TC84 451 aaPredicted RBP13.56□□□□□ -0.24
SRP54-201ENST00000216774 AP1ARQ63HQ0 302 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 ZYG11AQ6WRX3 759 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 SETD3Q86TU7 594 aaPredicted RBP13.56□□□□□ -0.24
SRP54-201ENST00000216774 TMEM126BQ8IUX1 230 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 NCSTNQ92542 709 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 OPTNQ96CV9 577 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 HDAC11Q96DB2 347 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 VPS39Q96JC1 886 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 OR52B2Q96RD2 323 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 ACE2Q9BYF1 805 aaPredicted RBP13.56□□□□□ -0.24
SRP54-201ENST00000216774 DRC3Q9H069 523 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 FAM49AQ9H0Q0 323 aaPredicted RBP13.56□□□□□ -0.24
SRP54-201ENST00000216774 CAB39LQ9H9S4 337 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 C20orf96Q9NUD7 363 aaPredicted RBP13.56□□□□□ -0.24
SRP54-201ENST00000216774 VPS28Q9UK41 221 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 SLCO1B7G3V0H7 640 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 FAM72CH0Y354 149 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 ZBTB24O43167 697 aaPredicted RBP13.56□□□□□ -0.24
SRP54-201ENST00000216774 AP1G1O43747 822 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 ZMPSTE24O75844 475 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 FAM163BP0C2L3 166 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 DNAJB2P25686 324 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 RPL14P50914 215 aaKnown RBP13.56□□□□□ -0.24
SRP54-201ENST00000216774 ZNF135P52742 658 aaPredicted RBP13.56□□□□□ -0.24
SRP54-201ENST00000216774 LILRA4P59901 499 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 PEX6Q13608 980 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 DLG2Q15700 870 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 FAM72AQ5TYM5 149 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 LIPMQ5VYY2 423 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 SEL1L3Q68CR1 1132 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 FAM72DQ6L9T8 149 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 OSTM1Q86WC4 334 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 FAM72BQ86X60 149 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 CPSF7Q8N684 471 aaKnown RBP13.56□□□□□ -0.24
SRP54-201ENST00000216774 ICA1LQ8NDH6 482 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 GPRC5AQ8NFJ5 357 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 RP9Q8TA86 221 aaKnown RBP13.56□□□□□ -0.24
SRP54-201ENST00000216774 MFSD3Q96ES6 412 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 PGLYRP2Q96PD5 576 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 OSMRQ99650 979 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 GPR22Q99680 433 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 MLPHQ9BV36 600 aaPredicted RBP13.56□□□□□ -0.24
SRP54-201ENST00000216774 CDHR5Q9HBB8 845 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 RNF19AQ9NV58 838 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 VTI1BQ9UEU0 232 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 PSMD13Q9UNM6 376 aa13.56□□□□□ -0.24
SRP54-201ENST00000216774 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.55□□□□□ -0.24
SRP54-201ENST00000216774 C9IYK1 514 aa13.55□□□□□ -0.24
SRP54-201ENST00000216774 CABYRO75952 493 aa13.55□□□□□ -0.24
SRP54-201ENST00000216774 BEST1O76090 585 aa13.55□□□□□ -0.24
SRP54-201ENST00000216774 PTPN1P18031 435 aaKnown RBP13.55□□□□□ -0.24
SRP54-201ENST00000216774 PIK3R1P27986 724 aa13.55□□□□□ -0.24
SRP54-201ENST00000216774 GSTT1P30711 240 aa13.55□□□□□ -0.24
SRP54-201ENST00000216774 CD68P34810 354 aaPredicted RBP13.55□□□□□ -0.24
SRP54-201ENST00000216774 NDUFV1P49821 464 aa13.55□□□□□ -0.24
SRP54-201ENST00000216774 GJA9P57773 515 aa13.55□□□□□ -0.24
SRP54-201ENST00000216774 GALNT2Q10471 571 aa13.55□□□□□ -0.24
SRP54-201ENST00000216774 DUSP28Q4G0W2 176 aa13.55□□□□□ -0.24
SRP54-201ENST00000216774 CERCAMQ5T4B2 595 aa13.55□□□□□ -0.24
SRP54-201ENST00000216774 RASIP1Q5U651 963 aa13.55□□□□□ -0.24
SRP54-201ENST00000216774 CLEC20AQ6ZU45 233 aa13.55□□□□□ -0.24
SRP54-201ENST00000216774 PAQR9Q6ZVX9 377 aa13.55□□□□□ -0.24
SRP54-201ENST00000216774 KYQ8NBH2 561 aa13.55□□□□□ -0.24
SRP54-201ENST00000216774 HIPK4Q8NE63 616 aa13.55□□□□□ -0.24
SRP54-201ENST00000216774 PGAP3Q96FM1 320 aaPredicted RBP13.55□□□□□ -0.24
SRP54-201ENST00000216774 WDR6Q9NNW5 1121 aaKnown RBP13.55□□□□□ -0.24
SRP54-201ENST00000216774 DMAP1Q9NPF5 467 aaPredicted RBP13.55□□□□□ -0.24
SRP54-201ENST00000216774 BCAP29Q9UHQ4 241 aa13.55□□□□□ -0.24
SRP54-201ENST00000216774 FBXW11Q9UKB1 542 aa13.55□□□□□ -0.24
SRP54-201ENST00000216774 TLK1Q9UKI8 766 aa13.55□□□□□ -0.24
SRP54-201ENST00000216774 SLC4A7Q9Y6M7 1214 aa13.55□□□□□ -0.24
SRP54-201ENST00000216774 CLDN5O00501 218 aa13.55□□□□□ -0.24
SRP54-201ENST00000216774 SNAI1O95863 264 aaPredicted RBP13.55□□□□□ -0.24
SRP54-201ENST00000216774 LTFP02788 710 aa13.55□□□□□ -0.24
SRP54-201ENST00000216774 FYNP06241 537 aa13.55□□□□□ -0.24
SRP54-201ENST00000216774 PABPC4LP0CB38 370 aaKnown RBP13.55□□□□□ -0.24
SRP54-201ENST00000216774 PPARGP37231 505 aaPredicted RBP13.55□□□□□ -0.24
SRP54-201ENST00000216774 NUDT2P50583 147 aa13.55□□□□□ -0.24
SRP54-201ENST00000216774 TKTL1P51854 596 aa13.55□□□□□ -0.24
SRP54-201ENST00000216774 SOX4Q06945 474 aaPredicted RBP13.55□□□□□ -0.24
SRP54-201ENST00000216774 DLG1Q12959 904 aa13.55□□□□□ -0.24
SRP54-201ENST00000216774 PRKAA1Q13131 559 aa13.55□□□□□ -0.24
SRP54-201ENST00000216774 DYNC1I2Q13409 638 aaKnown RBP13.55□□□□□ -0.24
SRP54-201ENST00000216774 CNPY1Q3B7I2 92 aa13.55□□□□□ -0.24
SRP54-201ENST00000216774 ZFP1Q6P2D0 407 aa13.55□□□□□ -0.24
SRP54-201ENST00000216774 PQLC1Q8N2U9 271 aa13.55□□□□□ -0.24
SRP54-201ENST00000216774 RNF169Q8NCN4 708 aa13.55□□□□□ -0.24
SRP54-201ENST00000216774 TSNARE1Q96NA8 513 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms