RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 GRAMD1AQ96CP6 724 aa17.75■□□□□ 0.43
VRK1-201ENST00000216639 SERAC1Q96JX3 654 aa17.75■□□□□ 0.43
VRK1-201ENST00000216639 RPRD1AQ96P16 312 aaPredicted RBP17.75■□□□□ 0.43
VRK1-201ENST00000216639 KLF6Q99612 283 aaPredicted RBP17.75■□□□□ 0.43
VRK1-201ENST00000216639 ELAC2Q9BQ52 826 aaKnown RBP17.75■□□□□ 0.43
VRK1-201ENST00000216639 CYP4F11Q9HBI6 524 aa17.75■□□□□ 0.43
VRK1-201ENST00000216639 FGFR1OP2Q9NVK5 253 aa17.75■□□□□ 0.43
VRK1-201ENST00000216639 SPG21Q9NZD8 308 aa17.75■□□□□ 0.43
VRK1-201ENST00000216639 TXNDC16Q9P2K2 825 aa17.75■□□□□ 0.43
VRK1-201ENST00000216639 MYO18AQ92614 2054 aaKnown RBP17.75■□□□□ 0.43
VRK1-201ENST00000216639 SHROOM3Q8TF72 1996 aa17.75■□□□□ 0.43
VRK1-201ENST00000216639 BRCA2P51587 3418 aa17.75■□□□□ 0.43
VRK1-201ENST00000216639 COPEO14579 308 aa17.75■□□□□ 0.43
VRK1-201ENST00000216639 USP1O94782 785 aa17.75■□□□□ 0.43
VRK1-201ENST00000216639 URODP06132 367 aa17.75■□□□□ 0.43
VRK1-201ENST00000216639 PYGBP11216 843 aa17.75■□□□□ 0.43
VRK1-201ENST00000216639 NIPAL4Q0D2K0 466 aa17.75■□□□□ 0.43
VRK1-201ENST00000216639 DNAJC3Q13217 504 aa17.75■□□□□ 0.43
VRK1-201ENST00000216639 FRG1Q14331 258 aaKnown RBP17.75■□□□□ 0.43
VRK1-201ENST00000216639 VEPH1Q14D04 833 aa17.75■□□□□ 0.43
VRK1-201ENST00000216639 SLC1A5Q15758 541 aa17.75■□□□□ 0.43
VRK1-201ENST00000216639 HECTD3Q5T447 861 aa17.75■□□□□ 0.43
VRK1-201ENST00000216639 FAM117BQ6P1L5 589 aa17.75■□□□□ 0.43
VRK1-201ENST00000216639 KLHDC10Q6PID8 442 aa17.75■□□□□ 0.43
VRK1-201ENST00000216639 OTOP3Q7RTS5 596 aa17.75■□□□□ 0.43
VRK1-201ENST00000216639 TMEM199Q8N511 208 aa17.75■□□□□ 0.43
VRK1-201ENST00000216639 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.75■□□□□ 0.43
VRK1-201ENST00000216639 LRRC8CQ8TDW0 803 aa17.75■□□□□ 0.43
VRK1-201ENST00000216639 VWCEQ96DN2 955 aa17.75■□□□□ 0.43
VRK1-201ENST00000216639 CERS2Q96G23 380 aa17.75■□□□□ 0.43
VRK1-201ENST00000216639 PAWRQ96IZ0 340 aaKnown RBP17.75■□□□□ 0.43
VRK1-201ENST00000216639 TRPM5Q9NZQ8 1165 aa17.75■□□□□ 0.43
VRK1-201ENST00000216639 LTBP2Q14767 1821 aa17.74■□□□□ 0.43
VRK1-201ENST00000216639 NUP205Q92621 2012 aa17.74■□□□□ 0.43
VRK1-201ENST00000216639 F5H5T6 163 aa17.74■□□□□ 0.43
VRK1-201ENST00000216639 RAG1P15918 1043 aa17.74■□□□□ 0.43
VRK1-201ENST00000216639 TAC1P20366 129 aa17.74■□□□□ 0.43
VRK1-201ENST00000216639 MAPKAPK2P49137 400 aa17.74■□□□□ 0.43
VRK1-201ENST00000216639 HARS2P49590 506 aaKnown RBP17.74■□□□□ 0.43
VRK1-201ENST00000216639 IFT88Q13099 833 aa17.74■□□□□ 0.43
VRK1-201ENST00000216639 HNRNPDQ14103 355 aaKnown RBP17.74■□□□□ 0.43
VRK1-201ENST00000216639 LRRC26Q2I0M4 334 aa17.74■□□□□ 0.43
VRK1-201ENST00000216639 ALFQ53S48 1182 aa17.74■□□□□ 0.43
VRK1-201ENST00000216639 DDX53Q86TM3 631 aaKnown RBP17.74■□□□□ 0.43
VRK1-201ENST00000216639 TMEM135Q86UB9 458 aa17.74■□□□□ 0.43
VRK1-201ENST00000216639 RASSF3Q86WH2 238 aa17.74■□□□□ 0.43
VRK1-201ENST00000216639 ZNF669Q96BR6 464 aaPredicted RBP17.74■□□□□ 0.43
VRK1-201ENST00000216639 TBL1YQ9BQ87 522 aa17.74■□□□□ 0.43
VRK1-201ENST00000216639 RETREG1Q9H6L5 497 aa17.74■□□□□ 0.43
VRK1-201ENST00000216639 SP110Q9HB58 689 aa17.74■□□□□ 0.43
VRK1-201ENST00000216639 RC3H2Q9HBD1 1191 aaKnown RBP17.74■□□□□ 0.43
VRK1-201ENST00000216639 UBP1Q9NZI7 540 aa17.74■□□□□ 0.43
VRK1-201ENST00000216639 ZFATQ9P243 1243 aa17.74■□□□□ 0.43
VRK1-201ENST00000216639 FAM237BA0A1B0GVD1 139 aa17.73■□□□□ 0.43
VRK1-201ENST00000216639 ZNF840PA6NDX5 716 aa17.73■□□□□ 0.43
VRK1-201ENST00000216639 SEC24AO95486 1093 aa17.73■□□□□ 0.43
VRK1-201ENST00000216639 ALADP13716 330 aa17.73■□□□□ 0.43
VRK1-201ENST00000216639 CSF2RAP15509 400 aa17.73■□□□□ 0.43
VRK1-201ENST00000216639 TACR2P21452 398 aa17.73■□□□□ 0.43
VRK1-201ENST00000216639 FOXN2P32314 431 aa17.73■□□□□ 0.43
VRK1-201ENST00000216639 ELF1P32519 619 aa17.73■□□□□ 0.43
VRK1-201ENST00000216639 PPP3CCP48454 512 aa17.73■□□□□ 0.43
VRK1-201ENST00000216639 SLC11A2P49281 568 aa17.73■□□□□ 0.43
VRK1-201ENST00000216639 WDR5P61964 334 aaKnown RBP17.73■□□□□ 0.43
VRK1-201ENST00000216639 DEFB103AP81534 67 aa17.73■□□□□ 0.43
VRK1-201ENST00000216639 OLIG2Q13516 323 aa17.73■□□□□ 0.43
VRK1-201ENST00000216639 PARP15Q460N3 678 aa17.73■□□□□ 0.43
VRK1-201ENST00000216639 C6orf89Q6UWU4 347 aa17.73■□□□□ 0.43
VRK1-201ENST00000216639 TIFABQ6ZNK6 161 aa17.73■□□□□ 0.43
VRK1-201ENST00000216639 SH2D5Q6ZV89 423 aa17.73■□□□□ 0.43
VRK1-201ENST00000216639 ZNF354CQ86Y25 554 aa17.73■□□□□ 0.43
VRK1-201ENST00000216639 OTUD6BQ8N6M0 293 aa17.73■□□□□ 0.43
VRK1-201ENST00000216639 IGSF8Q969P0 613 aa17.73■□□□□ 0.43
VRK1-201ENST00000216639 MYRFLQ96LU7 910 aa17.73■□□□□ 0.43
VRK1-201ENST00000216639 PITPNM3Q9BZ71 974 aa17.73■□□□□ 0.43
VRK1-201ENST00000216639 VPS11Q9H270 941 aa17.73■□□□□ 0.43
VRK1-201ENST00000216639 NOL6Q9H6R4 1146 aaKnown RBP17.73■□□□□ 0.43
VRK1-201ENST00000216639 ENTPD7Q9NQZ7 604 aa17.73■□□□□ 0.43
VRK1-201ENST00000216639 STK39Q9UEW8 545 aa17.73■□□□□ 0.43
VRK1-201ENST00000216639 MRPL42Q9Y6G3 142 aaKnown RBP17.73■□□□□ 0.43
VRK1-201ENST00000216639 COL4A6Q14031 1691 aa17.73■□□□□ 0.43
VRK1-201ENST00000216639 CEP350Q5VT06 3117 aa17.73■□□□□ 0.43
VRK1-201ENST00000216639 KIAA0355O15063 1070 aa17.72■□□□□ 0.43
VRK1-201ENST00000216639 ATP9BO43861 1147 aa17.72■□□□□ 0.43
VRK1-201ENST00000216639 SNX3O60493 162 aa17.72■□□□□ 0.43
VRK1-201ENST00000216639 UGT1A9O60656 530 aa17.72■□□□□ 0.43
VRK1-201ENST00000216639 RAMP2O60895 175 aa17.72■□□□□ 0.43
VRK1-201ENST00000216639 CNTN5O94779 1100 aa17.72■□□□□ 0.43
VRK1-201ENST00000216639 BAIAP3O94812 1187 aa17.72■□□□□ 0.43
VRK1-201ENST00000216639 HLA-DQB2P05538 268 aa17.72■□□□□ 0.43
VRK1-201ENST00000216639 PPM1AP35813 382 aa17.72■□□□□ 0.43
VRK1-201ENST00000216639 NEK3P51956 506 aa17.72■□□□□ 0.43
VRK1-201ENST00000216639 YBEYP58557 167 aaPredicted RBP17.72■□□□□ 0.43
VRK1-201ENST00000216639 RAB33AQ14088 237 aa17.72■□□□□ 0.43
VRK1-201ENST00000216639 POLD3Q15054 466 aaPredicted RBP17.72■□□□□ 0.43
VRK1-201ENST00000216639 ZKSCAN8Q15776 578 aaPredicted RBP17.72■□□□□ 0.43
VRK1-201ENST00000216639 MARC1Q5VT66 337 aa17.72■□□□□ 0.43
VRK1-201ENST00000216639 CCDC121Q6ZUS5 278 aa17.72■□□□□ 0.43
VRK1-201ENST00000216639 PLD4Q96BZ4 506 aa17.72■□□□□ 0.43
VRK1-201ENST00000216639 HMCESQ96FZ2 354 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms