RNA–Protein interactions for RNA: ENST00000194152.3

PCDHB4-201, Transcript of protocadherin beta 4, humanhuman

APPRIS P1 BASIC

Gene PCDHB4, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-201ENST00000194152 ZNF358Q9NW07 568 aa13.18□□□□□ -0.3
PCDHB4-201ENST00000194152 STX18Q9P2W9 335 aaKnown RBP13.18□□□□□ -0.3
PCDHB4-201ENST00000194152 PCDHGC3Q9UN70 934 aa13.18□□□□□ -0.3
PCDHB4-201ENST00000194152 STARD13Q9Y3M8 1113 aa13.18□□□□□ -0.3
PCDHB4-201ENST00000194152 ARFGEF1Q9Y6D6 1849 aa13.18□□□□□ -0.3
PCDHB4-201ENST00000194152 MYOCOSA0A1B0GUC4 107 aa13.18□□□□□ -0.3
PCDHB4-201ENST00000194152 FAM237BA0A1B0GVD1 139 aa13.18□□□□□ -0.3
PCDHB4-201ENST00000194152 GIPC1O14908 333 aa13.18□□□□□ -0.3
PCDHB4-201ENST00000194152 LYPLA1O75608 230 aaPredicted RBP13.18□□□□□ -0.3
PCDHB4-201ENST00000194152 MT-CYBP00156 380 aaPredicted RBP13.18□□□□□ -0.3
PCDHB4-201ENST00000194152 ITGB1P05556 798 aa13.18□□□□□ -0.3
PCDHB4-201ENST00000194152 ODC1P11926 461 aa13.18□□□□□ -0.3
PCDHB4-201ENST00000194152 PDK2Q15119 407 aa13.18□□□□□ -0.3
PCDHB4-201ENST00000194152 PRR11Q96HE9 360 aaPredicted RBP13.18□□□□□ -0.3
PCDHB4-201ENST00000194152 APBA2Q99767 749 aa13.18□□□□□ -0.3
PCDHB4-201ENST00000194152 LHX5Q9H2C1 402 aa13.18□□□□□ -0.3
PCDHB4-201ENST00000194152 PIGVQ9NUD9 493 aa13.18□□□□□ -0.3
PCDHB4-201ENST00000194152 TAS2R1Q9NYW7 299 aa13.18□□□□□ -0.3
PCDHB4-201ENST00000194152 SLC12A8A0AV02 714 aa13.18□□□□□ -0.3
PCDHB4-201ENST00000194152 FAM72CH0Y354 149 aa13.18□□□□□ -0.3
PCDHB4-201ENST00000194152 ITGAVP06756 1048 aa13.18□□□□□ -0.3
PCDHB4-201ENST00000194152 TSPAN8P19075 237 aa13.18□□□□□ -0.3
PCDHB4-201ENST00000194152 SERPINB8P50452 374 aa13.18□□□□□ -0.3
PCDHB4-201ENST00000194152 GHRHRQ02643 423 aa13.18□□□□□ -0.3
PCDHB4-201ENST00000194152 TSTA3Q13630 321 aaPredicted RBP13.18□□□□□ -0.3
PCDHB4-201ENST00000194152 FBXO48Q5FWF7 155 aa13.18□□□□□ -0.3
PCDHB4-201ENST00000194152 FAM72AQ5TYM5 149 aa13.18□□□□□ -0.3
PCDHB4-201ENST00000194152 TTC39BQ5VTQ0 682 aaPredicted RBP13.18□□□□□ -0.3
PCDHB4-201ENST00000194152 FAM72DQ6L9T8 149 aa13.18□□□□□ -0.3
PCDHB4-201ENST00000194152 TAF2Q6P1X5 1199 aa13.18□□□□□ -0.3
PCDHB4-201ENST00000194152 GPRIN1Q7Z2K8 1008 aa13.18□□□□□ -0.3
PCDHB4-201ENST00000194152 STRA8Q7Z7C7 330 aa13.18□□□□□ -0.3
PCDHB4-201ENST00000194152 LDB1Q86U70 411 aaPredicted RBP13.18□□□□□ -0.3
PCDHB4-201ENST00000194152 FAM72BQ86X60 149 aa13.18□□□□□ -0.3
PCDHB4-201ENST00000194152 BLOC1S5Q8TDH9 187 aa13.18□□□□□ -0.3
PCDHB4-201ENST00000194152 WNT8BQ93098 351 aa13.18□□□□□ -0.3
PCDHB4-201ENST00000194152 WWP1Q9H0M0 922 aa13.18□□□□□ -0.3
PCDHB4-201ENST00000194152 TASP1Q9H6P5 420 aa13.18□□□□□ -0.3
PCDHB4-201ENST00000194152 POPDC2Q9HBU9 364 aa13.18□□□□□ -0.3
PCDHB4-201ENST00000194152 RBM22Q9NW64 420 aaKnown RBP eCLIP13.18□□□□□ -0.3
PCDHB4-201ENST00000194152 HCSTQ9UBK5 93 aa13.18□□□□□ -0.3
PCDHB4-201ENST00000194152 DLEC1Q9Y238 1755 aa13.18□□□□□ -0.3
PCDHB4-201ENST00000194152 ANKRD12Q6UB98 2062 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 SMIM35A0A1B0GVV1 85 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 FCHO1O14526 889 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 EDF1O60869 148 aaKnown RBP13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 ZMPSTE24O75844 475 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 MRPS5P82675 430 aaKnown RBP13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 NSUN2Q08J23 767 aaKnown RBP eCLIP13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 CDC16Q13042 620 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 KLF1Q13351 362 aaPredicted RBP13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 LSAMPQ13449 338 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 RASA2Q15283 850 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 CNGA3Q16281 694 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 B3GNT6Q6ZMB0 384 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 UTS2BQ765I0 119 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 SLC26A11Q86WA9 606 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 TTC39CQ8N584 583 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 ENDOVQ8N8Q3 282 aaKnown RBP13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 URGCPQ8TCY9 931 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 TRIB2Q92519 343 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 ALKBH8Q96BT7 664 aaKnown RBP13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 TRIM17Q9Y577 477 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 AIM2O14862 343 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 PEX1O43933 1283 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 VAPBO95292 243 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 NELFEP18615 380 aaKnown RBP13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 NFKB1P19838 968 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 IVDP26440 423 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 NAA20P61599 178 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 DMPKQ09013 629 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 ITGA7Q13683 1181 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 ATP1A4Q13733 1029 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 NOMO1Q15155 1222 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 DLG2Q15700 870 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 NOMO2Q5JPE7 1267 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 PTAR1Q7Z6K3 402 aaPredicted RBP13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 TRABD2AQ86V40 505 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 ANKLE1Q8NAG6 615 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 FICDQ9BVA6 458 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 SENP6Q9GZR1 1112 aaPredicted RBP13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 MAN1C1Q9NR34 630 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 NUP205Q92621 2012 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 A0A0J9YVX5 310 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 C3orf70A6NLC5 250 aaPredicted RBP13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 MATKP42679 507 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 ZNF132P52740 706 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 GPX6P59796 221 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 ART3Q13508 389 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 CYP1B1Q16678 543 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 GSTCDQ8NEC7 633 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 OR6Y1Q8NGX8 325 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 FBXO32Q969P5 355 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 MFSD3Q96ES6 412 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 OMDQ99983 421 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 TUBB6Q9BUF5 446 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 LIN28AQ9H9Z2 209 aaKnown RBP13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 SSX2IPQ9Y2D8 614 aa13.17□□□□□ -0.3
PCDHB4-201ENST00000194152 URB1O60287 2271 aaKnown RBP13.16□□□□□ -0.3
PCDHB4-201ENST00000194152 TBKBP1A7MCY6 615 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms