RNA–Protein interactions for RNA: ENSMUST00000185355.6

Ldb1-208, Transcript of LIM domain-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Ldb1, Length 2,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-208ENSMUST00000185355 ADGRF3Q58Y75 991 aa28.35■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Itm2aQ61500 263 aa28.35■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Cpa1Q7TPZ8 419 aa28.35■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Nup54Q8BTS4 510 aaKnown RBP28.35■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Slco6c1Q8C0X7 706 aa28.35■■■□□ 2.13
Ldb1-208ENSMUST00000185355 LnpepQ8C129 1025 aa28.35■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Slc22a19Q8VCA0 551 aa28.35■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Nt5c1bQ91YE9 573 aa28.35■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Dhrs1Q99L04 313 aa28.35■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Sytl2Q99N50 950 aa28.35■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Alg13Q9D8C3 1166 aaKnown RBP28.35■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Dhx35A2ACQ1 703 aaKnown RBP28.34■■■□□ 2.13
Ldb1-208ENSMUST00000185355 UprtB1AVZ0 310 aa28.34■■■□□ 2.13
Ldb1-208ENSMUST00000185355 KitP05532 979 aa28.34■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Dnmt3cP0DOY1 709 aa28.34■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Krt32Q62168 407 aa28.34■■■□□ 2.13
Ldb1-208ENSMUST00000185355 ChpfQ6IQX7 774 aa28.34■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Dusp11Q6NXK5 321 aaKnown RBP28.34■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Nemp1Q6ZQE4 437 aa28.34■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Echs1Q8BH95 290 aaKnown RBP28.34■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Mat2bQ99LB6 334 aa28.34■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Map2k5Q9WVS7 448 aa28.34■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Psma3O70435 255 aa28.34■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Lamp2P17047 415 aa28.34■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Lrrc8bQ5DU41 803 aa28.34■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Pqbp1Q91VJ5 263 aaKnown RBP28.34■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Tmem68Q9D850 329 aa28.34■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Slc13a1Q9JHI4 594 aa28.34■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Chrna4O70174 629 aa28.33■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Cbfa2t2O70374 594 aa28.33■■■□□ 2.13
Ldb1-208ENSMUST00000185355 AlplP09242 524 aa28.33■■■□□ 2.13
Ldb1-208ENSMUST00000185355 StacP97306 403 aa28.33■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Atxn7l3bQ3UD01 97 aa28.33■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Msi1Q61474 362 aaKnown RBP28.33■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Ip6k1Q6PD10 433 aa28.33■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Abhd10Q6PE15 297 aa28.33■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Asb14Q8C6Y6 587 aa28.33■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Wdr60Q8C761 999 aa28.33■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Sorcs3Q8VI51 1219 aa28.33■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Sgf29Q9DA08 293 aaKnown RBP28.33■■■□□ 2.13
Ldb1-208ENSMUST00000185355 C1qtnf1Q9QXP7 281 aa28.33■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Igkv5-43A0A0B4J1J2 115 aa28.33■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Fam8a1Q3URQ4 399 aa28.33■■■□□ 2.13
Ldb1-208ENSMUST00000185355 P3h1Q3V1T4 739 aa28.33■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Gucy2fQ5SDA5 1108 aa28.33■■■□□ 2.13
Ldb1-208ENSMUST00000185355 MafkQ61827 156 aa28.33■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Rassf6Q80UQ2 353 aa28.33■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Ldlrap1Q8C142 308 aa28.33■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Atp6ap2Q9CYN9 350 aa28.33■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Trim42Q9D2H5 723 aa28.33■■■□□ 2.13
Ldb1-208ENSMUST00000185355 GabrqQ9JLF1 638 aa28.33■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Maged1Q9QYH6 775 aaKnown RBP28.33■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Spint1Q9R097 507 aa28.33■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Slfn2Q9Z0I6 378 aa28.33■■■□□ 2.13
Ldb1-208ENSMUST00000185355 Plxna3P70208 1872 aa28.32■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Kdelc2G5E897 503 aa28.32■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Tlx1P43345 332 aa28.32■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Rtl3Q6P1Y1 553 aa28.32■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Dusp16Q6PCP3 660 aa28.32■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Olfr293Q7TS10 336 aa28.32■■■□□ 2.12
Ldb1-208ENSMUST00000185355 PimregQ8BFY7 231 aa28.32■■■□□ 2.12
Ldb1-208ENSMUST00000185355 LipmQ8K2A6 422 aa28.32■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Cdkn2aipnlQ9D211 116 aaKnown RBP28.32■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Kcng1A2BDX4 514 aa28.31■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Kifc5bE9PUA5 672 aa28.31■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Gm10250G3X9L6 160 aaKnown RBP28.31■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Axin1O35625 863 aa28.31■■■□□ 2.12
Ldb1-208ENSMUST00000185355 P01644 108 aa28.31■■■□□ 2.12
Ldb1-208ENSMUST00000185355 P01645 108 aa28.31■■■□□ 2.12
Ldb1-208ENSMUST00000185355 P01646 108 aa28.31■■■□□ 2.12
Ldb1-208ENSMUST00000185355 P01647 108 aa28.31■■■□□ 2.12
Ldb1-208ENSMUST00000185355 ChgbP16014 677 aa28.31■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Fam167bP17257 162 aa28.31■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Sppl2bQ3TD49 578 aa28.31■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Arid5aQ3U108 590 aa28.31■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Mfsd3Q5U419 412 aa28.31■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Hmgb4Q6P8W9 181 aa28.31■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Pcsk9Q80W65 694 aa28.31■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Trpa1Q8BLA8 1125 aa28.31■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Clptm1lQ8BXA5 539 aa28.31■■■□□ 2.12
Ldb1-208ENSMUST00000185355 CtbsQ8R242 366 aa28.31■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Mob2Q8VI63 235 aa28.31■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Mrpl57Q9CQF8 102 aaKnown RBP28.31■■■□□ 2.12
Ldb1-208ENSMUST00000185355 EtfbQ9DCW4 255 aaKnown RBP28.31■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Atp5hQ9DCX2 161 aa28.31■■■□□ 2.12
Ldb1-208ENSMUST00000185355 RalbQ9JIW9 206 aa28.31■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Tdp2Q9JJX7 370 aa28.31■■■□□ 2.12
Ldb1-208ENSMUST00000185355 NumbQ9QZS3 653 aa28.31■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Atp11cQ9QZW0 1129 aa28.31■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Cyp4a12bA2A974 508 aa28.31■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Odc1P00860 461 aa28.31■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Sbk3P0C5K0 361 aa28.31■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Ppm1aP49443 382 aa28.31■■■□□ 2.12
Ldb1-208ENSMUST00000185355 1810049J17RikQ3V2G9 153 aa28.31■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Ctxn3Q8BXZ0 80 aa28.31■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Cyp4a12aQ91WL5 508 aa28.31■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Akirin1Q99LF1 191 aa28.31■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Nme5Q99MH5 211 aa28.31■■■□□ 2.12
Ldb1-208ENSMUST00000185355 PolhQ9JJN0 694 aa28.31■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Gm5415E9PXF3 478 aa28.3■■■□□ 2.12
Retrieved 100 of 22,080 RNA–protein pairs in 24.8 ms