RNA–Protein interactions for RNA: ENSMUST00000177588.7

Lig1-211, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-211ENSMUST00000177588 AcdQ5EE38 416 aa11.51□□□□□ -0.57
Lig1-211ENSMUST00000177588 Itih1Q61702 907 aa11.51□□□□□ -0.57
Lig1-211ENSMUST00000177588 Ahcyl2Q68FL4 613 aaKnown RBP11.51□□□□□ -0.57
Lig1-211ENSMUST00000177588 Tmem151aQ6GQT5 468 aa11.51□□□□□ -0.57
Lig1-211ENSMUST00000177588 Grsf1Q8C5Q4 479 aaKnown RBP11.51□□□□□ -0.57
Lig1-211ENSMUST00000177588 Fnbp1lQ8K012 605 aa11.51□□□□□ -0.57
Lig1-211ENSMUST00000177588 Serpinb10Q8K1K6 397 aa11.51□□□□□ -0.57
Lig1-211ENSMUST00000177588 Tspan14Q8QZY6 270 aa11.51□□□□□ -0.57
Lig1-211ENSMUST00000177588 Ssx2ipQ8VC66 615 aa11.51□□□□□ -0.57
Lig1-211ENSMUST00000177588 Rem2Q8VEL9 341 aa11.51□□□□□ -0.57
Lig1-211ENSMUST00000177588 Msi2Q920Q6 346 aaKnown RBP11.51□□□□□ -0.57
Lig1-211ENSMUST00000177588 Arl2Q9D0J4 184 aa11.51□□□□□ -0.57
Lig1-211ENSMUST00000177588 Eif4e3Q9DBB5 207 aa11.51□□□□□ -0.57
Lig1-211ENSMUST00000177588 RecqlQ9Z129 648 aa11.51□□□□□ -0.57
Lig1-211ENSMUST00000177588 Zfp236S4R299 1847 aa11.51□□□□□ -0.57
Lig1-211ENSMUST00000177588 Klhl32A2AJX0 620 aa11.51□□□□□ -0.57
Lig1-211ENSMUST00000177588 2610028H24RikG5E8K1 270 aa11.51□□□□□ -0.57
Lig1-211ENSMUST00000177588 Gm10721J3QPJ9 223 aa11.51□□□□□ -0.57
Lig1-211ENSMUST00000177588 Krt10P02535 570 aa11.51□□□□□ -0.57
Lig1-211ENSMUST00000177588 Aldh3a1P47739 453 aa11.51□□□□□ -0.57
Lig1-211ENSMUST00000177588 Rnf157Q3TEL6 685 aa11.51□□□□□ -0.57
Lig1-211ENSMUST00000177588 Armcx5Q3UZB0 606 aa11.51□□□□□ -0.57
Lig1-211ENSMUST00000177588 Scn2bQ56A07 215 aa11.51□□□□□ -0.57
Lig1-211ENSMUST00000177588 Kctd12Q6WVG3 327 aa11.51□□□□□ -0.57
Lig1-211ENSMUST00000177588 Slc39a14Q75N73 489 aa11.51□□□□□ -0.57
Lig1-211ENSMUST00000177588 Zdhhc17Q80TN5 632 aa11.51□□□□□ -0.57
Lig1-211ENSMUST00000177588 Pxylp1Q8BHA9 480 aa11.51□□□□□ -0.57
Lig1-211ENSMUST00000177588 Bmp3Q8BHE5 468 aa11.51□□□□□ -0.57
Lig1-211ENSMUST00000177588 StgQ8BM15 349 aa11.51□□□□□ -0.57
Lig1-211ENSMUST00000177588 Dis3lQ8C0S1 1053 aa11.51□□□□□ -0.57
Lig1-211ENSMUST00000177588 Pcdhb7Q8CDY9 829 aa11.51□□□□□ -0.57
Lig1-211ENSMUST00000177588 Ddx18Q8K363 660 aaKnown RBP11.51□□□□□ -0.57
Lig1-211ENSMUST00000177588 Krt5Q922U2 580 aa11.51□□□□□ -0.57
Lig1-211ENSMUST00000177588 Mrps18aQ99N85 196 aa11.51□□□□□ -0.57
Lig1-211ENSMUST00000177588 Tubgcp4Q9D4F8 667 aa11.51□□□□□ -0.57
Lig1-211ENSMUST00000177588 Fiz1Q9WTJ4 500 aa11.51□□□□□ -0.57
Lig1-211ENSMUST00000177588 Apobec2Q9WV35 224 aa11.51□□□□□ -0.57
Lig1-211ENSMUST00000177588 Shcbp1Q9Z179 668 aa11.51□□□□□ -0.57
Lig1-211ENSMUST00000177588 Cntnap5aQ0V8T9 1304 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 Skint1A7TZE6 364 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 Nfx1B1AY10 1114 aaKnown RBP11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 C87414E9PWI7 475 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 JhyE9Q793 770 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 Gm7942L7N277 499 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 Scd1P13516 355 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 TktP40142 623 aaKnown RBP11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 Snx27Q3UHD6 539 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 Scube3Q66PY1 993 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 Prl3a1Q78Y73 227 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 Mtmr10Q7TPM9 771 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 Xylt1Q811B1 953 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 Tmem198Q8BG75 360 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 Rap2cQ8BU31 183 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 Anapc2Q8BZQ7 837 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 Vps11Q91W86 941 aaKnown RBP11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 Sec16bQ91XT4 1051 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 KlbQ99N32 1043 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 Rnf181Q9CY62 165 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 Psmd12Q9D8W5 456 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 Akr1c12Q9JLI0 323 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 PolkQ9QUG2 852 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 Znhit2Q9QY66 399 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 Dnajc12Q9R022 198 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 Nme3Q9WV85 169 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 Slc23a1Q9Z2J0 605 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 Pcna-ps2A0A140T8V5 261 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 Nlrp12E9Q5R7 1054 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 Gm5160F8VPN3 147 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 Gm7694J3QNH8 270 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 Kng1O08677 661 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 PcnaP17918 261 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 Arl4aP61213 200 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 Tmem102Q3UPR7 509 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 Nqo1Q64669 274 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 Sel1l3Q80TS8 1137 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 Mis18bp1Q80WQ8 998 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 Clptm1lQ8BXA5 539 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 Slco6c1Q8C0X7 706 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 RtknQ8C6B2 564 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 Acad10Q8K370 1069 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 Pcdhgb1Q91XX8 918 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 Acbd6Q9D061 282 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 Bcas2Q9D287 225 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 Cab39lQ9DB16 337 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 Slc29a1Q9JIM1 460 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 Bscl2Q9Z2E9 383 aa11.5□□□□□ -0.57
Lig1-211ENSMUST00000177588 Prr14lE9Q7C4 1971 aa11.49□□□□□ -0.57
Lig1-211ENSMUST00000177588 Pcsk6F6XJP7 959 aa11.49□□□□□ -0.57
Lig1-211ENSMUST00000177588 Ifi206G3UZV2 921 aa11.49□□□□□ -0.57
Lig1-211ENSMUST00000177588 Vps4bP46467 444 aaKnown RBP11.49□□□□□ -0.57
Lig1-211ENSMUST00000177588 CstaP56567 97 aa11.49□□□□□ -0.57
Lig1-211ENSMUST00000177588 Akap7Q7TN79 314 aa11.49□□□□□ -0.57
Lig1-211ENSMUST00000177588 Olfr23Q7TRX4 325 aa11.49□□□□□ -0.57
Lig1-211ENSMUST00000177588 Best2Q8BGM5 508 aa11.49□□□□□ -0.57
Lig1-211ENSMUST00000177588 CcnyQ8BGU5 341 aa11.49□□□□□ -0.57
Lig1-211ENSMUST00000177588 Zcchc4Q8BKW4 512 aa11.49□□□□□ -0.57
Lig1-211ENSMUST00000177588 Ccdc184Q8BMK5 191 aa11.49□□□□□ -0.57
Lig1-211ENSMUST00000177588 Cndp1Q8BUG2 492 aa11.49□□□□□ -0.57
Lig1-211ENSMUST00000177588 Adam32Q8K410 754 aa11.49□□□□□ -0.57
Lig1-211ENSMUST00000177588 Gsg1Q8R1W2 324 aa11.49□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms