RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Gm5415E9PXF3 478 aa23.17■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Zbtb11G5E8B9 1050 aaKnown RBP23.17■■□□□ 1.3
Scn1b-201ENSMUST00000098548 RaxO35602 342 aa23.17■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Anxa8O35640 327 aa23.17■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Fgf13P70377 245 aa23.17■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Irx2P81066 474 aa23.17■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Trmt10cQ3UFY8 414 aaKnown RBP23.17■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Gpd1lQ3ULJ0 351 aa23.17■■□□□ 1.3
Scn1b-201ENSMUST00000098548 KrtdapQ3V2T4 102 aa23.17■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Nlrp4eQ66X19 978 aa23.17■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Glra2Q7TNC8 452 aa23.17■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Epb41l5Q8BGS1 731 aa23.17■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Olfm2Q8BM13 448 aa23.17■■□□□ 1.3
Scn1b-201ENSMUST00000098548 SncaipQ99ME3 962 aa23.17■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Ascc1Q9D8Z1 356 aaKnown RBP23.17■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Bace2Q9JL18 514 aa23.17■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Numa1E9Q7G0 2094 aaKnown RBP23.16■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Kat6aQ8BZ21 2003 aa23.16■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Rhox3fA2ANE1 215 aa23.16■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Kctd18E0CZ26 429 aa23.16■■□□□ 1.3
Scn1b-201ENSMUST00000098548 4930426L09RikE9Q0N7 123 aa23.16■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Vmn2r67K7N6T2 851 aa23.16■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Ercc2O08811 760 aaKnown RBP23.16■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Folr1P35846 255 aa23.16■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Msh2P43247 935 aaKnown RBP23.16■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Trappc9Q3U0M1 1148 aa23.16■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Cnga4Q3UW12 575 aa23.16■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Taar7eQ5QD09 358 aa23.16■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Gbp4Q61107 620 aa23.16■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Ccdc40Q8BI79 1192 aa23.16■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Znf276Q8CE64 614 aa23.16■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Lrrc14Q8VC16 493 aa23.16■■□□□ 1.3
Scn1b-201ENSMUST00000098548 NonoQ99K48 473 aaKnown RBP23.16■■□□□ 1.3
Scn1b-201ENSMUST00000098548 DlstQ9D2G2 454 aa23.16■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Eef1akmt2Q9D853 244 aa23.16■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Scn8aQ9WTU3 1978 aa23.16■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Pcsk5Q04592 1877 aa23.15■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Ccdc8D3YZV8 685 aa23.15■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Pdss1Q33DR2 409 aa23.15■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Prkaa1Q5EG47 559 aa23.15■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Gpr19Q61121 415 aa23.15■■□□□ 1.3
Scn1b-201ENSMUST00000098548 2700097O09RikQ6PGK3 301 aa23.15■■□□□ 1.3
Scn1b-201ENSMUST00000098548 CcnyQ8BGU5 341 aa23.15■■□□□ 1.3
Scn1b-201ENSMUST00000098548 SheQ8BSD5 492 aa23.15■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Rccd1Q8BTU7 377 aa23.15■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Itpk1Q8BYN3 419 aa23.15■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Afap1l1Q8BZI0 768 aa23.15■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Sit1Q8C503 180 aa23.15■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Arhgap18Q8K0Q5 663 aa23.15■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Cybrd1Q925G2 290 aa23.15■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Sike1Q9CPR7 207 aa23.15■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Ndufb5Q9CQH3 189 aa23.15■■□□□ 1.3
Scn1b-201ENSMUST00000098548 PtprfA2A8L5 1898 aa23.15■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Zfp626A0A0U1RQ84 676 aa23.14■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Gm3424L7N298 263 aa23.14■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Gm8246M0QWX9 263 aa23.14■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Usp2O88623 613 aa23.14■■□□□ 1.3
Scn1b-201ENSMUST00000098548 AfpP02772 605 aa23.14■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Rag1P15919 1040 aa23.14■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Cdo1P60334 200 aa23.14■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Kctd19Q562E2 927 aa23.14■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Ndrg1Q62433 394 aa23.14■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Parp6Q6P6P7 630 aa23.14■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Nup54Q8BTS4 510 aaKnown RBP23.14■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Osbpl1aQ91XL9 950 aa23.14■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Arl2Q9D0J4 184 aa23.14■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Plscr2Q9DCW2 307 aa23.14■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Dnajb1Q9QYJ3 340 aaKnown RBP23.14■■□□□ 1.3
Scn1b-201ENSMUST00000098548 Aldh1a7O35945 501 aa23.14■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Mcpt4P21812 246 aa23.14■■□□□ 1.29
Scn1b-201ENSMUST00000098548 St3gal1P54751 337 aa23.14■■□□□ 1.29
Scn1b-201ENSMUST00000098548 AxlQ00993 888 aa23.14■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Pecam1Q08481 727 aaKnown RBP23.14■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Abcg2Q7TMS5 657 aa23.14■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Eif2aQ8BJW6 581 aaKnown RBP23.14■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Robo4Q8C310 1012 aa23.14■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Scara3Q8C850 606 aa23.14■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Slc35f6Q8VE96 372 aa23.14■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Lpin1Q91ZP3 924 aa23.14■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Habp4Q9JKS5 411 aaKnown RBP23.14■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Olfr271-ps1A0A1L1SQH2 283 aa23.13■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Znf518bB2RRE4 1077 aa23.13■■□□□ 1.29
Scn1b-201ENSMUST00000098548 GmlE9PX31 176 aa23.13■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Ptch2O35595 1182 aa23.13■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Psma2P49722 234 aa23.13■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Ddx6P54823 483 aaKnown RBP23.13■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Rin3P59729 980 aa23.13■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Uba1Q02053 1058 aaKnown RBP23.13■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Ripply1Q2WG77 201 aa23.13■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Krt32Q62168 407 aa23.13■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Itga3Q62470 1053 aa23.13■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Gga2Q6P5E6 603 aa23.13■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Naif1Q6PFD7 327 aa23.13■■□□□ 1.29
Scn1b-201ENSMUST00000098548 CptpQ8BS40 216 aa23.13■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Zfp263Q8CF60 680 aa23.13■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Ackr4Q924I3 350 aa23.13■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Ndufab1Q9CR21 156 aa23.13■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Rpl34Q9D1R9 117 aaKnown RBP23.13■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Scube2Q9JJS0 997 aa23.13■■□□□ 1.29
Scn1b-201ENSMUST00000098548 Mcm3apQ9WUU9 1971 aa23.13■■□□□ 1.29
Retrieved 100 of 22,080 RNA–protein pairs in 18.2 ms