RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Arhgap8Q9CXP4 425 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Fbxo16Q9QZM9 334 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Med20Q9R0X0 212 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Cpxm1Q9Z100 722 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Chek2Q9Z265 546 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Zgrf1Q0VGT4 1863 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Ighv11-2A0A075B5R8 117 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Kng1O08677 661 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Dnmt3bO88509 859 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Abcb1bP06795 1276 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 IppP28575 584 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 ThraP63058 492 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Vps45P97390 570 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Fam189a2Q4FZH1 290 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Clhc1Q5M6W3 596 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Rps27lQ6ZWY3 84 aaKnown RBP11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Olfr389Q7TRX7 312 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Sel1l3Q80TS8 1137 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Fra10ac1Q8BP78 315 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Lca5lQ8C0X0 741 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 NeproQ8R2U2 564 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Q9D4A5 307 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Kctd4Q9D7X1 259 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Paqr5Q9DCU0 330 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 VarsQ9Z1Q9 1263 aaKnown RBP11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Slc4a11A2AJN7 862 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Cyp2b13A6H6J2 491 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Gm43302L7N1X8 611 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Hcn3O88705 779 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Kcnj6P48542 425 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Gbp10Q000W5 611 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Gdf3Q07104 366 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Arhgap1Q5FWK3 439 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Atp2c1Q80XR2 918 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Trim14Q8BVW3 440 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 SgczQ8BX51 311 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Atg14Q8CDJ3 492 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 HscbQ8K3A0 234 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Pcdhga10Q91XY9 930 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Twf1Q91YR1 350 aaKnown RBP11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Lrrc71Q9D3W5 558 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Echdc3Q9D7J9 300 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Ccdc97Q9DBT3 340 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Ruvbl2Q9WTM5 463 aaKnown RBP11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Rps6ka2Q9WUT3 733 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Apobec2Q9WV35 224 aa11.78□□□□□ -0.52
Col9a1-202ENSMUST00000088349 Gm6370A0A0G2JGX9 315 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Trim5E9PV98 497 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Zfp850J3QPC5 689 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Gm6309L7N481 315 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Neu1O35657 409 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Gjd2O54851 321 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Scd1P13516 355 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Msr1P30204 458 aaKnown RBP11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Il12bP43432 335 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Il6stQ00560 917 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Cog7Q3UM29 770 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Fam129aQ3UW53 926 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Krt32Q62168 407 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Nlrp9cQ66X01 1004 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Mis18bp1Q80WQ8 998 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Ankrd45Q810N6 248 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Pnma2Q8BHK0 365 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Ptk7Q8BKG3 1062 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Tbc1d17Q8BYH7 645 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Wwp1Q8BZZ3 918 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Brat1Q8C3R1 822 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 HpdlQ8K248 371 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Tspan14Q8QZY6 270 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Slc22a19Q8VCA0 551 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Ampd2Q9DBT5 798 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Grm3Q9QYS2 879 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Map3k6Q9WTR2 1291 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Grin3aA2AIR5 1135 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Pdia2D3Z6P0 527 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 C87414E9PWI7 475 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Cyp2f2P33267 491 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Ephx2P34914 554 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Aldh3a1P47739 453 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 LmnaP48678 665 aaKnown RBP11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Oas1fQ14AZ4 364 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Tmem26Q3UP23 366 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Trim67Q505D9 768 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Itga3Q62470 1053 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Arhgap10Q6Y5D8 786 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Grik4Q8BMF5 956 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 OsgepQ8BWU5 335 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Wdr59Q8C0M0 992 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Slco6c1Q8C0X7 706 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Ccdc90bQ8C3X2 256 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Evi2bQ8VD58 444 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Tmco4Q91WU4 631 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Gtf2ird2Q99NI3 936 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Ogfod2Q9CQ04 349 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Tma16Q9CR02 221 aaKnown RBP11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Mmp19Q9JHI0 527 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Alms1Q8K4E0 3251 aa11.77□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Klhl32A2AJX0 620 aa11.76□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Gm10720D3Z1I5 223 aa11.76□□□□□ -0.53
Col9a1-202ENSMUST00000088349 SmgcF6VRN1 385 aa11.76□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 35.8 ms