RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Serpina12Q7TMF5 413 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Znf436Q8BPP0 452 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Thop1Q8C1A5 687 aaKnown RBP9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Csgalnact2Q8C1F4 542 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Grsf1Q8C5Q4 479 aaKnown RBP9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 BicralQ8CHH5 1074 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Ccdc137Q8R0K4 290 aaKnown RBP9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Setd3Q91WC0 594 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Slc8b1Q925Q3 585 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Dph2Q9CR25 489 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Trmt11Q9CWH5 460 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Arl2bpQ9D385 163 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 NapaQ9DB05 295 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 TrehQ9JLT2 576 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Mageh1Q9NWG9 218 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Tagln2Q9WVA4 199 aaKnown RBP9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 DohhA0A1Y7VJ29 135 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Zmat3O54836 290 aaKnown RBP9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Cdh8P97291 799 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Cdk7Q03147 346 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Myl6Q60605 151 aaKnown RBP9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 HiraQ61666 1015 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Tgoln1Q62313 353 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Dalrd3Q6PJN8 538 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 B430306N03RikQ6QX36 289 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Trim52Q8CDV4 233 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Lin7aQ8JZS0 233 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gstm4Q8R5I6 218 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Cbwd1Q8VEH6 393 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 PpidQ9CR16 370 aaKnown RBP9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Nup50Q9JIH2 466 aaKnown RBP9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Ror1Q9Z139 937 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Pgap3A2A559 320 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Mllt10O54826 1068 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Cyp1a1P00184 524 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 AgtP11859 477 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Lef1P27782 397 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Tcf7Q00417 419 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Nlrp1aQ2LKU9 1182 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gpr160Q3U3F9 336 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Dclk2Q6PGN3 756 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Ints7Q7TQK1 966 aaKnown RBP9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Tubgcp5Q8BKN5 1024 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Zfp263Q8CF60 680 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Creb5Q8K1L0 357 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Fam118aQ91YN1 357 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Ninj2Q9JL89 143 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Uba2Q9Z1F9 638 aa9.1□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Ptar1E9QAB6 424 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gm4778L7N229 365 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Tnfrsf18O35714 228 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Cyp2b9P12790 491 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Ccnd3P30282 292 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Mageb5Q14AN0 366 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Tmprss11bQ14C59 416 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Tmc5Q32NZ6 967 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Rufy4Q3TYX8 563 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Mapkapk3Q3UMW7 384 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Fam196aQ3USH1 422 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Sult1d1Q3UZZ6 295 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Mettl7a2Q5I0W6 244 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Glra4Q61603 456 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Oca2Q62052 833 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Epc2Q8C0I4 808 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Mettl7a1Q8C6B0 244 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Vps25Q9CQ80 176 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 4930503E14RikQ9D583 177 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Sytl4Q9R0Q1 673 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Chek2Q9Z265 546 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Zfand4D3Z3C6 739 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gm5926E9PWJ8 236 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 EomesO54839 707 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Pknox1O70477 436 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Ifngr1P15261 477 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 GabrdP22933 449 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Vsnl1P62761 191 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 SgcdP82347 289 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Psme2P97372 239 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Fam149b1Q6NSV7 578 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 PapolgQ6PCL9 739 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Tas2r131Q7M708 310 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 NelfbQ8C4Y3 580 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Stxbp6Q8R3T5 210 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Pcdhb10Q91VE5 797 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 OgfrQ99PG2 633 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Q9D2X8 372 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Tubb3Q9ERD7 450 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Tcirg1Q9JHF5 834 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Smad9Q9JIW5 430 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Rad1Q9QWZ1 280 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Pcdhgb8A0A140LI48 931 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Btbd2E9PUS2 523 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Rtel1Q0VGM9 1203 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 H2-M3Q31093 336 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Bahd1Q497V6 772 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Pcsk7Q61139 770 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Rwdd3Q8VIL2 267 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Tdrd3Q91W18 743 aaKnown RBP9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Chmp1b2Q9CQD4 199 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gpc1Q9QZF2 557 aa9.09□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 16.9 ms