RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Prr33Q8C494 260 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Snx30Q8CE50 437 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Gspt1Q8R050 636 aaKnown RBP12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Creld1Q91XD7 420 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Pcdha6Q91Y14 946 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Necab2Q91ZP9 389 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Mgea5Q9EQQ9 916 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 C1qtnf1Q9QXP7 281 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Slc8a3S4R2P9 928 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Zfc3h1B2RT41 1992 aaKnown RBP12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Gm8113E0CXS8 587 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Slc4a9E9PUP3 929 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Gm4788E9Q8B5 879 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Kdelc2G5E897 503 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 HcrtO55241 130 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Cbfa2t2O70374 594 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Alas2P08680 587 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Hcls1P49710 486 aaKnown RBP12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Atp6v0d1P51863 351 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Grid2ipQ0QWG9 1203 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Lrrc8bQ5DU41 803 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Luc7l3Q5SUF2 432 aaKnown RBP12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Dpp9Q8BVG4 862 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 ClmnQ8C5W0 1052 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Slfn5Q8CBA2 884 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Caap1Q8VDY9 356 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Actr3Q99JY9 418 aaKnown RBP12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Psmd8Q9CX56 353 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 CasrQ9QY96 1079 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Klhl41A2AUC9 606 aa12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Gm3252E9PUT9 216 aa12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Gm3468E9QAJ8 216 aa12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Ift81O35594 676 aa12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Chrna4O70174 629 aa12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 PdgfaP20033 211 aa12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 ZfaP23607 742 aa12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 DesP31001 469 aaKnown RBP12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Mettl17Q3U2U7 461 aa12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Lsmem1Q3UQS2 128 aa12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Tas2r129Q7M709 320 aa12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Rimbp2Q80U40 1072 aa12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Pramel7Q810Y8 479 aa12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Fam204aQ8C6C7 236 aa12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Klhl2Q8JZP3 593 aa12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Rps6kl1Q8R2S1 544 aa12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Sult5a1Q91X36 291 aa12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Trim42Q9D2H5 723 aa12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Cep83Q9D5R3 692 aa12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Oser1Q9D722 291 aa12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Efcab9Q9DAM2 216 aa12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Cab39lQ9DB16 337 aa12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Slc29a1Q9JIM1 460 aa12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Tspan3Q9QY33 253 aa12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 PignQ9R1S3 931 aa12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Mtmr7Q9Z2C9 660 aa12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Smok3cA0A087WSF2 504 aa12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Akain1G3UWD5 69 aa12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 P01673 111 aa12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Atxn1lP0C7T6 687 aa12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Gsta3P30115 221 aa12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 HmgcrQ01237 887 aa12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Clec4b1Q7TS58 209 aa12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Lrrc27Q80YS5 523 aa12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Ccdc40Q8BI79 1192 aa12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Nlrp4bQ8C6J9 863 aa12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Pgm2l1Q8CAA7 621 aa12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Bclaf1Q8K019 919 aaKnown RBP12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Fbxo21Q8VDH1 627 aa12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Olfr532Q8VGT4 309 aa12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Pcdhb11Q91UZ8 797 aa12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Ddit4Q9D3F7 229 aa12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Dlgap1Q9D415 992 aa12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Akr1c12Q9JLI0 323 aa12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Ern2Q9Z2E3 911 aa12.94□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Casp8ap2Q9WUF3 1962 aa12.93□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Dhx35A2ACQ1 703 aaKnown RBP12.93□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Pex10B1AUE5 324 aa12.93□□□□□ -0.34
Rnf4-201ENSMUST00000030992 9330159F19RikD3Z623 648 aa12.93□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Brcc3P46737 291 aa12.93□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Gabrb3P63080 473 aa12.93□□□□□ -0.34
Rnf4-201ENSMUST00000030992 G3bp2P97379 482 aaKnown RBP12.93□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Cyb5r2Q3KNK3 276 aa12.93□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Scn2bQ56A07 215 aa12.93□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Gata6Q61169 589 aa12.93□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Atp4aQ64436 1033 aa12.93□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Nlrp9cQ66X01 1004 aa12.93□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Cntn4Q69Z26 1026 aa12.93□□□□□ -0.34
Rnf4-201ENSMUST00000030992 BoraQ8BS90 525 aa12.93□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Dmtf1Q8CE22 761 aa12.93□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Ppa2Q91VM9 330 aa12.93□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Mrpl57Q9CQF8 102 aaKnown RBP12.93□□□□□ -0.34
Rnf4-201ENSMUST00000030992 4930513O06RikQ9D549 161 aa12.93□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Scamp5Q9JKD3 235 aa12.93□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Uts2Q9QZQ3 123 aa12.93□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Ror2Q9Z138 944 aa12.93□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Rhox3fA2ANE1 215 aa12.93□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Supt3B0QZW4 406 aa12.93□□□□□ -0.34
Rnf4-201ENSMUST00000030992 5830411N06RikB3F5L4 1112 aa12.93□□□□□ -0.34
Rnf4-201ENSMUST00000030992 AvilO88398 819 aa12.93□□□□□ -0.34
Rnf4-201ENSMUST00000030992 P01668 110 aa12.93□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 42.4 ms