RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Ap3d1O54774 1199 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 AprtP08030 180 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 LtfP08071 707 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 TgfbiP82198 683 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Rtkn2Q14B46 604 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Muc3aQ3U5A2 218 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Nat8lQ3UGX3 299 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Kbtbd8Q3UQV5 599 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Mief2Q5NCS9 454 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 ZyxQ62523 564 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Tnpo3Q6P2B1 923 aaKnown RBP10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Prmt3Q922H1 532 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Ninj2Q9JL89 143 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Mpp6Q9JLB0 553 aa10.3□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Nfx1B1AY10 1114 aaKnown RBP10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Gm5483B2RV77 97 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Spata31d1dE9Q5W2 1247 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Gtf2bP62915 316 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Lrrc8bQ5DU41 803 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Gja3Q64448 417 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Znf513Q6PD29 541 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 RragdQ7TT45 449 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Pkn2Q8BWW9 983 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Ttc23Q8CHY7 488 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Gprc5cQ8K3J9 440 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Cox18Q8VC74 331 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Slc5a9Q8VDT1 685 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Mospd1Q8VEL0 213 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Cyp2c70Q91W64 489 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Asb7Q91ZU0 318 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Mrpl19Q9D338 292 aaKnown RBP10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 PrccQ9EQC8 491 aaKnown RBP10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Prex1Q69ZK0 1650 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Zbed5B2RPU8 756 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Rab12P35283 243 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Cct3P80318 545 aaKnown RBP10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Tssk1bQ61241 365 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Kcnj11Q61743 390 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Olfr212Q7TS33 327 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Spata20Q80YT5 790 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Socs4Q91ZA6 436 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Prmt7Q922X9 692 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Cpt1bQ924X2 772 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Dnaja4Q9JMC3 397 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Ing1Q9QXV3 279 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Spef2Q8C9J3 1734 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Dhtkd1A2ATU0 921 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Gbx2P48031 348 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Fam167aQ6P1G6 215 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Idh3bQ91VA7 384 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Grhl1Q921D9 618 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Mtfr1Q99MB2 328 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Ap3s1Q9DCR2 193 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Vps35Q9EQH3 796 aaKnown RBP10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Gipc2Q9Z2H7 314 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Angpt1O08538 498 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Map2k3O09110 347 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Rhbdl3P58873 404 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Cdc42P60766 191 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Gpatch4Q3TFK5 415 aaKnown RBP10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 FAM120AQ6A0A9 1112 aaKnown RBP10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Spdye4bQ8CDE8 236 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Pop5Q9DB28 169 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Ddx59Q9DBN9 619 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Armc8Q9DBR3 673 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Cntnap4Q99P47 1310 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Oas1eA0A0J9YV76 386 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Ripor3A1L3T7 938 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Kif28pD3YXS5 1028 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Trim30bE9PVL6 203 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Odc1P00860 461 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Mrm3Q5ND52 418 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Tcf4Q60722 670 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Nyap1Q6PFX7 833 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Scgb2b2Q6UGQ3 114 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Pcid2Q8BFV2 399 aaKnown RBP10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Camkk2Q8C078 588 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 PpatQ8CIH9 517 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Ahi1Q8K3E5 1047 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 TbccQ8VCN9 341 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Dhx36Q8VHK9 1001 aaKnown RBP10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Chst12Q99LL3 419 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Tdrd1Q99MV1 1172 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Rdh14Q9ERI6 334 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Clcn5Q9WVD4 746 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Fads2Q9Z0R9 444 aaKnown RBP10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Abcc10Q8R4P9 1501 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Sirpb1aA0A0A6YYP6 397 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Ssxb8B1AY40 170 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Gm7694J3QNH8 270 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Ebf3O08791 596 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Pitpnm1O35954 1243 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Fbp2P70695 339 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Opa3Q505D7 179 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Scaf4Q6PFF0 1209 aaKnown RBP10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Wasf2Q8BH43 497 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Cpsf7Q8BTV2 471 aaKnown RBP10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Fgd2Q8BY35 655 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Kdm1bQ8CIG3 826 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Cdc73Q8JZM7 531 aa10.29□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 24.6 ms