RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Ephb3P54754 993 aaKnown RBP10.99□□□□□ -0.65
Ciita-201ENSMUST00000023147 Bend4P86174 541 aa10.99□□□□□ -0.65
Ciita-201ENSMUST00000023147 Chrna5Q2MKA5 467 aa10.99□□□□□ -0.65
Ciita-201ENSMUST00000023147 Pyroxd1Q3TMV7 498 aa10.99□□□□□ -0.65
Ciita-201ENSMUST00000023147 Fbxo42Q6PDJ6 717 aa10.99□□□□□ -0.65
Ciita-201ENSMUST00000023147 Tlr12Q6QNU9 906 aa10.99□□□□□ -0.65
Ciita-201ENSMUST00000023147 Pi4kbQ8BKC8 816 aa10.99□□□□□ -0.65
Ciita-201ENSMUST00000023147 Nat14Q8BVG8 206 aa10.99□□□□□ -0.65
Ciita-201ENSMUST00000023147 ScaiQ8C8N2 606 aa10.99□□□□□ -0.65
Ciita-201ENSMUST00000023147 Mab21L3Q8CI17 429 aa10.99□□□□□ -0.65
Ciita-201ENSMUST00000023147 DnerQ8JZM4 737 aa10.99□□□□□ -0.65
Ciita-201ENSMUST00000023147 Gprc5cQ8K3J9 440 aa10.99□□□□□ -0.65
Ciita-201ENSMUST00000023147 Guca1bQ8VBV8 201 aa10.99□□□□□ -0.65
Ciita-201ENSMUST00000023147 FggQ8VCM7 436 aa10.99□□□□□ -0.65
Ciita-201ENSMUST00000023147 Lrrc34Q9DAM1 415 aa10.99□□□□□ -0.65
Ciita-201ENSMUST00000023147 Tmem176aQ9DCS1 244 aa10.99□□□□□ -0.65
Ciita-201ENSMUST00000023147 Clcn2Q9R0A1 908 aa10.99□□□□□ -0.65
Ciita-201ENSMUST00000023147 Znf638Q61464 1960 aaKnown RBP10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 1700003F12RikA2AKE5 210 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 Smyd5Q3TYX3 416 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 Fdxacb1Q3UY23 622 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 Shroom1Q5SX79 823 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 PoliQ6R3M4 717 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 Dsg1bQ7TSF1 1060 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 Ldlrap1Q8C142 308 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 Pcdhga10Q91XY9 930 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 Rassf3Q99P51 232 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 SpastQ9QYY8 614 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 Aldh1a7O35945 501 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 Reps1O54916 795 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 Aldh1a1P24549 501 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 Stx4P70452 298 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 Meis2P97367 477 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 CltbQ6IRU5 229 aaKnown RBP10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 Ints6lQ8BND4 861 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 C1qtnf7Q8BVD7 289 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 CherpQ8CGZ0 936 aaKnown RBP10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 Alg9Q8VDI9 611 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 Gramd1aQ8VEF1 722 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 Nmd3Q99L48 503 aaKnown RBP10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 Adck1Q9D0L4 525 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 Ruvbl2Q9WTM5 463 aaKnown RBP10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 Shmt1P50431 478 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 Jak1P52332 1153 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 Frg1P97376 258 aaKnown RBP10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 Pou1f1Q00286 291 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 Muc1Q02496 630 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 Eif1adQ3THJ3 170 aaKnown RBP10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 Fam83fQ3UKU4 495 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 Fam198aQ3UY90 562 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 Stard3Q61542 446 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 GpamQ61586 827 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 Thop1Q8C1A5 687 aaKnown RBP10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 4931406P16RikQ8C5X1 1059 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 Fam126bQ8C729 530 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 Uba3Q8C878 462 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 RnpepQ8VCT3 650 aaKnown RBP10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 Ttc39cQ8VE09 580 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 DaglbQ91WC9 669 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 Nacc2Q9DCM7 586 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 Rnf19bA2A7Q9 732 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 Klf6O08584 283 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 Pitpnm1O35954 1243 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 PfklP12382 780 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 FaxcQ3UMF9 409 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 Tars2Q3UQ84 723 aaKnown RBP10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 Six2Q62232 296 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 Olfr212Q7TS33 327 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 Luzp2Q8BGY3 345 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 Atg14Q8CDJ3 492 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 Atxn7Q8R4I1 867 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 Dlgap1Q9D415 992 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 H2bfmQ9DAB5 224 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 Efcab12V9GXH0 673 aa10.98□□□□□ -0.65
Ciita-201ENSMUST00000023147 4921501E09RikA0A0R4J054 908 aa10.97□□□□□ -0.65
Ciita-201ENSMUST00000023147 Gm17333C6EQI3 125 aa10.97□□□□□ -0.65
Ciita-201ENSMUST00000023147 Tpst1O70281 370 aa10.97□□□□□ -0.65
Ciita-201ENSMUST00000023147 Mtco1P00397 514 aa10.97□□□□□ -0.65
Ciita-201ENSMUST00000023147 Eno2P17183 434 aa10.97□□□□□ -0.65
Ciita-201ENSMUST00000023147 CrtamQ149L7 389 aa10.97□□□□□ -0.65
Ciita-201ENSMUST00000023147 Myl12bQ3THE2 172 aaKnown RBP10.97□□□□□ -0.65
Ciita-201ENSMUST00000023147 Dnajc11Q5U458 559 aa10.97□□□□□ -0.65
Ciita-201ENSMUST00000023147 Atp13a3Q5XF89 1219 aa10.97□□□□□ -0.65
Ciita-201ENSMUST00000023147 Fam214aQ69ZK7 1075 aa10.97□□□□□ -0.65
Ciita-201ENSMUST00000023147 Slc9a7Q8BLV3 726 aa10.97□□□□□ -0.65
Ciita-201ENSMUST00000023147 Arhgef3Q91X46 524 aa10.97□□□□□ -0.65
Ciita-201ENSMUST00000023147 Txndc12Q9CQU0 170 aa10.97□□□□□ -0.65
Ciita-201ENSMUST00000023147 Ap3m1Q9JKC8 418 aa10.97□□□□□ -0.65
Ciita-201ENSMUST00000023147 Trpc4apQ9JLV2 797 aa10.97□□□□□ -0.65
Ciita-201ENSMUST00000023147 Ulk2Q9QY01 1037 aa10.97□□□□□ -0.65
Ciita-201ENSMUST00000023147 Gpc1Q9QZF2 557 aa10.97□□□□□ -0.65
Ciita-201ENSMUST00000023147 Smok3cA0A087WSF2 504 aa10.97□□□□□ -0.65
Ciita-201ENSMUST00000023147 Klhl18A0A0G2JGN5 579 aa10.97□□□□□ -0.65
Ciita-201ENSMUST00000023147 Prdm12A2AJ77 365 aa10.97□□□□□ -0.65
Ciita-201ENSMUST00000023147 Grik3B1AS29 919 aa10.97□□□□□ -0.65
Ciita-201ENSMUST00000023147 Slc1a6O35544 561 aa10.97□□□□□ -0.65
Ciita-201ENSMUST00000023147 Mdm4O35618 489 aa10.97□□□□□ -0.65
Ciita-201ENSMUST00000023147 Fgfr1P16092 822 aa10.97□□□□□ -0.65
Ciita-201ENSMUST00000023147 Glud1P26443 558 aaKnown RBP10.97□□□□□ -0.65
Ciita-201ENSMUST00000023147 Upf3aQ3ULJ3 422 aa10.97□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 31.5 ms