RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 CrotQ9DC50 612 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 SerhlQ9EPB5 311 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Prmt2Q9R144 448 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Osbpl7A2A716 963 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Zfp457L7N1X4 647 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Cbx2P30658 519 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Hoxc10P31257 342 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Aqp4P55088 323 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 E2f2P56931 443 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Gtf2bP62915 316 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 WasP70315 520 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Snx21Q3UR97 363 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Capn13Q3UW68 665 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Nt5c2Q3V1L4 560 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Lrrc47Q505F5 581 aaKnown RBP11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Shroom1Q5SX79 823 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Repin1Q5U4E2 545 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Rsbn1Q80T69 795 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Sh3tc2Q80VA5 1289 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Kbtbd3Q8BHI4 607 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Nipa1Q8BHK1 323 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Grsf1Q8C5Q4 479 aaKnown RBP11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Unc45bQ8CGY6 931 aaKnown RBP11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 TgdsQ8VDR7 355 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Med10Q9CXU0 135 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Hormad1Q9D5T7 392 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Gadd45gQ9Z111 159 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Gm10424A0A0J9YVD0 481 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Cdr2lA2A6T1 465 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Vmn2r63E9Q0K5 859 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Gm9268E9Q0M3 861 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Gm7971J3QMM8 481 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Vmn2r62K7N712 859 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Cdk14O35495 469 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Neu1O35657 409 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 SpibO35906 267 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Stmn3O70166 180 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Kcnk4O88454 398 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 ArntP53762 791 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Slc16a1P53986 493 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 St14P56677 855 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Cyp2c65Q148B1 490 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Slc24a2Q14BI1 711 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Gm1587Q3UT80 123 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 DcstampQ7TNJ0 470 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Oscp1Q8BHW2 379 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Cadm2Q8BLQ9 435 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Pgm5Q8BZF8 567 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Tmem161bQ8C2L6 487 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Nudcd3Q8R1N4 363 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Cd300ldQ8VCH2 221 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Cdhr5Q8VHF2 831 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Dennd2dQ91VV4 469 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Rassf3Q99P51 232 aa11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Npm3Q9CPP0 175 aaKnown RBP11.72□□□□□ -0.53
Sdc1-201ENSMUST00000020911 1700011I03RikE9PYL8 271 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Alx3O70137 343 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 S100a9P31725 113 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Adamts10P58459 1104 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Gng2P63213 71 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Dlg3P70175 849 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Tarbp2P97473 365 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 rp9P97762 213 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Thumpd3P97770 505 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Tnks2Q3UES3 1166 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Nt5dc3Q3UHB1 546 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Oog4Q4G0C7 502 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Tgoln2Q62314 363 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Fam214aQ69ZK7 1075 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Slc39a10Q6P5F6 833 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Sarm1Q6PDS3 724 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 HjurpQ6PG16 667 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Dclk2Q6PGN3 756 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Trim14Q8BVW3 440 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Ppm1kQ8BXN7 372 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Pabpc5Q8C7D3 381 aaKnown RBP11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Rab36Q8CAM5 267 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Gm5591Q8CDK1 855 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Hectd2Q8CDU6 774 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Mrpl17Q9D8P4 176 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Pold3Q9EQ28 462 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 4933406M09RikG3XA12 479 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Bmpr2O35607 1038 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 AfmO89020 608 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Slc3a2P10852 526 aaKnown RBP11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Bcat1P24288 386 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Klrb1bP27812 223 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Klrb1cP27814 223 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Plin2P43883 425 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Ttc39dQ0VF76 604 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Wdr36Q3TAQ9 899 aaKnown RBP11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Zc3h15Q3TIV5 426 aaKnown RBP11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Zfp868Q3UTQ6 422 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Dcaf15Q6PFH3 600 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Prr14Q7TPN9 612 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Suz12Q80U70 741 aaKnown RBP11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Vac14Q80WQ2 782 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Pdk1Q8BFP9 434 aaKnown RBP11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Lmo3Q8BZL8 145 aa11.71□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Lacc1Q8BZT9 430 aa11.71□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 42.5 ms