RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 ABCG4Q9H172 646 aa10.05□□□□□ -0.8
PHGDH-212ENST00000641247 RBSNQ9H1K0 784 aa10.05□□□□□ -0.8
PHGDH-212ENST00000641247 KLHL11Q9NVR0 708 aa10.05□□□□□ -0.8
PHGDH-212ENST00000641247 ANO10Q9NW15 660 aa10.05□□□□□ -0.8
PHGDH-212ENST00000641247 STIM2Q9P246 746 aa10.05□□□□□ -0.8
PHGDH-212ENST00000641247 TJP2Q9UDY2 1190 aa10.05□□□□□ -0.8
PHGDH-212ENST00000641247 ERVW-1Q9UQF0 538 aa10.05□□□□□ -0.8
PHGDH-212ENST00000641247 MAN2B2Q9Y2E5 1009 aa10.05□□□□□ -0.8
PHGDH-212ENST00000641247 PCDHGA8Q9Y5G5 932 aa10.05□□□□□ -0.8
PHGDH-212ENST00000641247 DOPEY2Q9Y3R5 2298 aa10.05□□□□□ -0.8
PHGDH-212ENST00000641247 COL27A1Q8IZC6 1860 aaPredicted RBP10.04□□□□□ -0.8
PHGDH-212ENST00000641247 TARSL2A2RTX5 802 aaKnown RBP10.04□□□□□ -0.8
PHGDH-212ENST00000641247 K7ESM1 405 aa10.04□□□□□ -0.8
PHGDH-212ENST00000641247 RNF103O00237 685 aa10.04□□□□□ -0.8
PHGDH-212ENST00000641247 EIF3DO15371 548 aaKnown RBP eCLIP10.04□□□□□ -0.8
PHGDH-212ENST00000641247 RNASEH1O60930 286 aaKnown RBP10.04□□□□□ -0.8
PHGDH-212ENST00000641247 CLSTN1O94985 981 aa10.04□□□□□ -0.8
PHGDH-212ENST00000641247 TNFSF15O95150 251 aa10.04□□□□□ -0.8
PHGDH-212ENST00000641247 ASS1P00966 412 aaKnown RBP10.04□□□□□ -0.8
PHGDH-212ENST00000641247 IL1BP01584 269 aa10.04□□□□□ -0.8
PHGDH-212ENST00000641247 MYL1P05976 194 aa10.04□□□□□ -0.8
PHGDH-212ENST00000641247 GP1BAP07359 652 aa10.04□□□□□ -0.8
PHGDH-212ENST00000641247 PRR29P0C7W0 189 aa10.04□□□□□ -0.8
PHGDH-212ENST00000641247 THEGLP0DJG4 465 aa10.04□□□□□ -0.8
PHGDH-212ENST00000641247 C5AR1P21730 350 aa10.04□□□□□ -0.8
PHGDH-212ENST00000641247 MZF1P28698 734 aaPredicted RBP10.04□□□□□ -0.8
PHGDH-212ENST00000641247 CASP1P29466 404 aa10.04□□□□□ -0.8
PHGDH-212ENST00000641247 AFMP43652 599 aa10.04□□□□□ -0.8
PHGDH-212ENST00000641247 HARS2P49590 506 aaKnown RBP10.04□□□□□ -0.8
PHGDH-212ENST00000641247 TAS2R38P59533 333 aa10.04□□□□□ -0.8
PHGDH-212ENST00000641247 CYP4F2P78329 520 aa10.04□□□□□ -0.8
PHGDH-212ENST00000641247 ASIC1P78348 528 aa10.04□□□□□ -0.8
PHGDH-212ENST00000641247 KCNMA1Q12791 1236 aa10.04□□□□□ -0.8
PHGDH-212ENST00000641247 SFSWAPQ12872 951 aaKnown RBP10.04□□□□□ -0.8
PHGDH-212ENST00000641247 DPYDQ12882 1025 aa10.04□□□□□ -0.8
PHGDH-212ENST00000641247 CLCA4Q14CN2 919 aa10.04□□□□□ -0.8
PHGDH-212ENST00000641247 TBR1Q16650 682 aa10.04□□□□□ -0.8
PHGDH-212ENST00000641247 CDKN3Q16667 212 aa10.04□□□□□ -0.8
PHGDH-212ENST00000641247 ZACNQ401N2 412 aa10.04□□□□□ -0.8
PHGDH-212ENST00000641247 ZNF394Q53GI3 561 aa10.04□□□□□ -0.8
PHGDH-212ENST00000641247 PERM1Q5SV97 790 aa10.04□□□□□ -0.8
PHGDH-212ENST00000641247 PM20D1Q6GTS8 502 aa10.04□□□□□ -0.8
PHGDH-212ENST00000641247 GUSBP11Q6P575 273 aa10.04□□□□□ -0.8
PHGDH-212ENST00000641247 SV2AQ7L0J3 742 aa10.04□□□□□ -0.8
PHGDH-212ENST00000641247 RSRC2Q7L4I2 434 aaKnown RBP10.04□□□□□ -0.8
PHGDH-212ENST00000641247 CCDC65Q8IXS2 484 aa10.04□□□□□ -0.8
PHGDH-212ENST00000641247 APCDD1Q8J025 514 aa10.04□□□□□ -0.8
PHGDH-212ENST00000641247 SLC22A18ASQ8N1D0 253 aa10.04□□□□□ -0.8
PHGDH-212ENST00000641247 FIBINQ8TAL6 211 aa10.04□□□□□ -0.8
PHGDH-212ENST00000641247 KLK6Q92876 244 aa10.04□□□□□ -0.8
PHGDH-212ENST00000641247 SMARCE1Q969G3 411 aa10.04□□□□□ -0.8
PHGDH-212ENST00000641247 RPL10LQ96L21 214 aaKnown RBP10.04□□□□□ -0.8
PHGDH-212ENST00000641247 PRICKLE1Q96MT3 831 aaPredicted RBP10.04□□□□□ -0.8
PHGDH-212ENST00000641247 SEMA3CQ99985 751 aa10.04□□□□□ -0.8
PHGDH-212ENST00000641247 NT5C1AQ9BXI3 368 aa10.04□□□□□ -0.8
PHGDH-212ENST00000641247 ULBP1Q9BZM6 244 aa10.04□□□□□ -0.8
PHGDH-212ENST00000641247 FZD3Q9NPG1 666 aa10.04□□□□□ -0.8
PHGDH-212ENST00000641247 KBTBD4Q9NVX7 518 aa10.04□□□□□ -0.8
PHGDH-212ENST00000641247 WDR70Q9NW82 654 aa10.04□□□□□ -0.8
PHGDH-212ENST00000641247 KCNK4Q9NYG8 393 aa10.04□□□□□ -0.8
PHGDH-212ENST00000641247 STRIP2Q9ULQ0 834 aa10.04□□□□□ -0.8
PHGDH-212ENST00000641247 YJEFN3A6XGL0 299 aa10.03□□□□□ -0.8
PHGDH-212ENST00000641247 E7ENQ6 273 aa10.03□□□□□ -0.8
PHGDH-212ENST00000641247 PLRG1O43660 514 aaKnown RBP10.03□□□□□ -0.8
PHGDH-212ENST00000641247 EXOC3O60645 756 aa10.03□□□□□ -0.8
PHGDH-212ENST00000641247 GABBR2O75899 941 aa10.03□□□□□ -0.8
PHGDH-212ENST00000641247 PRLRP16471 622 aa10.03□□□□□ -0.8
PHGDH-212ENST00000641247 CD58P19256 250 aa10.03□□□□□ -0.8
PHGDH-212ENST00000641247 STK19P49842 368 aaPredicted RBP10.03□□□□□ -0.8
PHGDH-212ENST00000641247 DUSP3P51452 185 aaPredicted RBP10.03□□□□□ -0.8
PHGDH-212ENST00000641247 TKTL1P51854 596 aa10.03□□□□□ -0.8
PHGDH-212ENST00000641247 CLDN2P57739 230 aa10.03□□□□□ -0.8
PHGDH-212ENST00000641247 ST8SIA6P61647 398 aa10.03□□□□□ -0.8
PHGDH-212ENST00000641247 RPS24P62847 133 aaKnown RBP10.03□□□□□ -0.8
PHGDH-212ENST00000641247 AMPD3Q01432 767 aa10.03□□□□□ -0.8
PHGDH-212ENST00000641247 OVGP1Q12889 678 aa10.03□□□□□ -0.8
PHGDH-212ENST00000641247 SKIDA1Q1XH10 827 aa10.03□□□□□ -0.8
PHGDH-212ENST00000641247 ANO6Q4KMQ2 910 aa10.03□□□□□ -0.8
PHGDH-212ENST00000641247 SGO2Q562F6 1265 aa10.03□□□□□ -0.8
PHGDH-212ENST00000641247 PITRM1Q5JRX3 1037 aa10.03□□□□□ -0.8
PHGDH-212ENST00000641247 USP53Q70EK8 1073 aa10.03□□□□□ -0.8
PHGDH-212ENST00000641247 ZNF771Q7L3S4 317 aaPredicted RBP10.03□□□□□ -0.8
PHGDH-212ENST00000641247 PTRH1Q86Y79 214 aaKnown RBP10.03□□□□□ -0.8
PHGDH-212ENST00000641247 MFN1Q8IWA4 741 aa10.03□□□□□ -0.8
PHGDH-212ENST00000641247 C12orf56Q8IXR9 622 aa10.03□□□□□ -0.8
PHGDH-212ENST00000641247 OR13H1Q8NG92 308 aa10.03□□□□□ -0.8
PHGDH-212ENST00000641247 HTR3CQ8WXA8 447 aa10.03□□□□□ -0.8
PHGDH-212ENST00000641247 SGF29Q96ES7 293 aa10.03□□□□□ -0.8
PHGDH-212ENST00000641247 CCDC97Q96F63 343 aaPredicted RBP10.03□□□□□ -0.8
PHGDH-212ENST00000641247 GSDMAQ96QA5 445 aa10.03□□□□□ -0.8
PHGDH-212ENST00000641247 EPN3Q9H201 632 aa10.03□□□□□ -0.8
PHGDH-212ENST00000641247 NLGN3Q9NZ94 848 aa10.03□□□□□ -0.8
PHGDH-212ENST00000641247 CGNQ9P2M7 1197 aaKnown RBP10.03□□□□□ -0.8
PHGDH-212ENST00000641247 KLF15Q9UIH9 416 aa10.03□□□□□ -0.8
PHGDH-212ENST00000641247 MAN1B1Q9UKM7 699 aa10.03□□□□□ -0.8
PHGDH-212ENST00000641247 ATXN7L1Q9ULK2 861 aaPredicted RBP10.03□□□□□ -0.8
PHGDH-212ENST00000641247 ITIH6Q6UXX5 1313 aa10.03□□□□□ -0.8
PHGDH-212ENST00000641247 EDDM13A0A1B0GTR0 161 aa10.02□□□□□ -0.81
PHGDH-212ENST00000641247 CPED1A4D0V7 1026 aa10.02□□□□□ -0.81
PHGDH-212ENST00000641247 PRAMEF26H0Y7S4 382 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms